RNA–Protein interactions for RNA: ENST00000466222.6

CAPN3-209, Transcript of calpain 3, humanhuman

TSL 2

Gene CAPN3, Length 1,934 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-209ENST00000466222 PTPN6P29350 595 aa17.51■□□□□ 0.39
CAPN3-209ENST00000466222 TSFMP43897 325 aaKnown RBP17.51■□□□□ 0.39
CAPN3-209ENST00000466222 MAT1AQ00266 395 aaKnown RBP17.51■□□□□ 0.39
CAPN3-209ENST00000466222 CD47Q08722 323 aa17.51■□□□□ 0.39
CAPN3-209ENST00000466222 SLC14A1Q13336 389 aa17.51■□□□□ 0.39
CAPN3-209ENST00000466222 SYT16Q17RD7 645 aa17.51■□□□□ 0.39
CAPN3-209ENST00000466222 CAMKMTQ7Z624 323 aa17.51■□□□□ 0.39
CAPN3-209ENST00000466222 SLITRK4Q8IW52 837 aa17.51■□□□□ 0.39
CAPN3-209ENST00000466222 CARFQ8N187 725 aa17.51■□□□□ 0.39
CAPN3-209ENST00000466222 SMYD1Q8NB12 490 aa17.51■□□□□ 0.39
CAPN3-209ENST00000466222 NETO1Q8TDF5 533 aa17.51■□□□□ 0.39
CAPN3-209ENST00000466222 HSPBAP1Q96EW2 488 aa17.51■□□□□ 0.39
CAPN3-209ENST00000466222 SERINC2Q96SA4 455 aa17.51■□□□□ 0.39
CAPN3-209ENST00000466222 PHOX2BQ99453 314 aa17.51■□□□□ 0.39
CAPN3-209ENST00000466222 NLNQ9BYT8 704 aa17.51■□□□□ 0.39
CAPN3-209ENST00000466222 LHPPQ9H008 270 aa17.51■□□□□ 0.39
CAPN3-209ENST00000466222 DHCR7Q9UBM7 475 aaKnown RBP17.51■□□□□ 0.39
CAPN3-209ENST00000466222 OTOGLQ3ZCN5 2332 aa17.5■□□□□ 0.39
CAPN3-209ENST00000466222 D6RAR5 112 aa17.5■□□□□ 0.39
CAPN3-209ENST00000466222 B3GALT2O43825 422 aa17.5■□□□□ 0.39
CAPN3-209ENST00000466222 C8orf89P0DMQ9 161 aa17.5■□□□□ 0.39
CAPN3-209ENST00000466222 IL7RP16871 459 aa17.5■□□□□ 0.39
CAPN3-209ENST00000466222 ARHGDIAP52565 204 aa17.5■□□□□ 0.39
CAPN3-209ENST00000466222 PDX1P52945 283 aa17.5■□□□□ 0.39
CAPN3-209ENST00000466222 ARFIP1P53367 373 aa17.5■□□□□ 0.39
CAPN3-209ENST00000466222 IST1P53990 364 aa17.5■□□□□ 0.39
CAPN3-209ENST00000466222 ISL1P61371 349 aa17.5■□□□□ 0.39
CAPN3-209ENST00000466222 TMEM52Q8NDY8 209 aa17.5■□□□□ 0.39
CAPN3-209ENST00000466222 STARD8Q92502 1023 aa17.5■□□□□ 0.39
CAPN3-209ENST00000466222 ZNF501Q96CX3 271 aaPredicted RBP17.5■□□□□ 0.39
CAPN3-209ENST00000466222 RBCK1Q9BYM8 510 aa17.5■□□□□ 0.39
CAPN3-209ENST00000466222 RPS6KA6Q9UK32 745 aa17.5■□□□□ 0.39
CAPN3-209ENST00000466222 DAPP1Q9UN19 280 aa17.5■□□□□ 0.39
CAPN3-209ENST00000466222 MAPRE3Q9UPY8 281 aa17.5■□□□□ 0.39
CAPN3-209ENST00000466222 HCN4Q9Y3Q4 1203 aa17.5■□□□□ 0.39
CAPN3-209ENST00000466222 PCDHGB1Q9Y5G3 927 aa17.5■□□□□ 0.39
CAPN3-209ENST00000466222 M0QX08 132 aa17.49■□□□□ 0.39
CAPN3-209ENST00000466222 SLC1A7O00341 560 aa17.49■□□□□ 0.39
CAPN3-209ENST00000466222 RFXANKO14593 260 aa17.49■□□□□ 0.39
CAPN3-209ENST00000466222 C6orf47O95873 294 aa17.49■□□□□ 0.39
CAPN3-209ENST00000466222 PIGAP37287 484 aa17.49■□□□□ 0.39
CAPN3-209ENST00000466222 NBL1P41271 181 aa17.49■□□□□ 0.39
CAPN3-209ENST00000466222 SIM1P81133 766 aaPredicted RBP17.49■□□□□ 0.39
CAPN3-209ENST00000466222 MEP1AQ16819 746 aa17.49■□□□□ 0.39
CAPN3-209ENST00000466222 INAVAQ3KP66 663 aa17.49■□□□□ 0.39
CAPN3-209ENST00000466222 TBC1D25Q3MII6 688 aa17.49■□□□□ 0.39
CAPN3-209ENST00000466222 LINC00299Q6ZSB3 139 aa17.49■□□□□ 0.39
CAPN3-209ENST00000466222 ZDHHC21Q8IVQ6 265 aa17.49■□□□□ 0.39
CAPN3-209ENST00000466222 TRUB1Q8WWH5 349 aaKnown RBP17.49■□□□□ 0.39
CAPN3-209ENST00000466222 PANX1Q96RD7 426 aa17.49■□□□□ 0.39
CAPN3-209ENST00000466222 ANKHQ9HCJ1 492 aa17.49■□□□□ 0.39
CAPN3-209ENST00000466222 HCN3Q9P1Z3 774 aa17.49■□□□□ 0.39
CAPN3-209ENST00000466222 MAU2Q9Y6X3 613 aa17.49■□□□□ 0.39
CAPN3-209ENST00000466222 hCG_2014768A0A024R1R8 64 aa17.49■□□□□ 0.39
CAPN3-209ENST00000466222 OR2W5A6NFC9 320 aa17.49■□□□□ 0.39
CAPN3-209ENST00000466222 MRPS14O60783 128 aaKnown RBP17.49■□□□□ 0.39
CAPN3-209ENST00000466222 ALAS2P22557 587 aa17.49■□□□□ 0.39
CAPN3-209ENST00000466222 TRA2BP62995 288 aaKnown RBP17.49■□□□□ 0.39
CAPN3-209ENST00000466222 HBA1P69905 142 aa17.49■□□□□ 0.39
CAPN3-209ENST00000466222 DUSP2Q05923 314 aa17.49■□□□□ 0.39
CAPN3-209ENST00000466222 KEAP1Q14145 624 aa17.49■□□□□ 0.39
CAPN3-209ENST00000466222 TTLL10Q6ZVT0 673 aa17.49■□□□□ 0.39
CAPN3-209ENST00000466222 ZNF554Q86TJ5 538 aa17.49■□□□□ 0.39
CAPN3-209ENST00000466222 OR4N5Q8IXE1 308 aa17.49■□□□□ 0.39
CAPN3-209ENST00000466222 C10orf111Q8N326 155 aa17.49■□□□□ 0.39
CAPN3-209ENST00000466222 ZDHHC19Q8WVZ1 309 aaPredicted RBP17.49■□□□□ 0.39
CAPN3-209ENST00000466222 OR6C1Q96RD1 312 aa17.49■□□□□ 0.39
CAPN3-209ENST00000466222 NODALQ96S42 347 aa17.49■□□□□ 0.39
CAPN3-209ENST00000466222 PRRX2Q99811 253 aa17.49■□□□□ 0.39
CAPN3-209ENST00000466222 SPATA9Q9BWV2 254 aa17.49■□□□□ 0.39
CAPN3-209ENST00000466222 TMEM121BQ9BXQ6 578 aaPredicted RBP17.49■□□□□ 0.39
CAPN3-209ENST00000466222 BHLHE41Q9C0J9 482 aaPredicted RBP17.49■□□□□ 0.39
CAPN3-209ENST00000466222 OCIAD1Q9NX40 245 aa17.49■□□□□ 0.39
CAPN3-209ENST00000466222 TMEFF2Q9UIK5 374 aaPredicted RBP17.49■□□□□ 0.39
CAPN3-209ENST00000466222 UTS2RQ9UKP6 389 aa17.49■□□□□ 0.39
CAPN3-209ENST00000466222 CES1P1Q9UKY3 287 aa17.49■□□□□ 0.39
CAPN3-209ENST00000466222 FITM1A5D6W6 292 aa17.48■□□□□ 0.39
CAPN3-209ENST00000466222 BCKDKO14874 412 aa17.48■□□□□ 0.39
CAPN3-209ENST00000466222 TOX3O15405 576 aaPredicted RBP17.48■□□□□ 0.39
CAPN3-209ENST00000466222 ERAL1O75616 437 aaKnown RBP17.48■□□□□ 0.39
CAPN3-209ENST00000466222 TIAF1O95411 115 aa17.48■□□□□ 0.39
CAPN3-209ENST00000466222 CPN2P22792 545 aa17.48■□□□□ 0.39
CAPN3-209ENST00000466222 CXCR4P61073 352 aa17.48■□□□□ 0.39
CAPN3-209ENST00000466222 SHC2P98077 582 aa17.48■□□□□ 0.39
CAPN3-209ENST00000466222 SPIDRQ14159 915 aa17.48■□□□□ 0.39
CAPN3-209ENST00000466222 CTU2Q2VPK5 515 aaKnown RBP17.48■□□□□ 0.39
CAPN3-209ENST00000466222 TCTE1Q5JU00 501 aa17.48■□□□□ 0.39
CAPN3-209ENST00000466222 CPZQ66K79 652 aa17.48■□□□□ 0.39
CAPN3-209ENST00000466222 ZNF621Q6ZSS3 439 aa17.48■□□□□ 0.39
CAPN3-209ENST00000466222 ZNF551Q7Z340 670 aaPredicted RBP17.48■□□□□ 0.39
CAPN3-209ENST00000466222 KMT5CQ86Y97 462 aa17.48■□□□□ 0.39
CAPN3-209ENST00000466222 CA13Q8N1Q1 262 aa17.48■□□□□ 0.39
CAPN3-209ENST00000466222 RAD21L1Q9H4I0 556 aa17.48■□□□□ 0.39
CAPN3-209ENST00000466222 APMAPQ9HDC9 416 aa17.48■□□□□ 0.39
CAPN3-209ENST00000466222 FAM120CQ9NX05 1096 aaKnown RBP17.48■□□□□ 0.39
CAPN3-209ENST00000466222 B3GNT3Q9Y2A9 372 aa17.48■□□□□ 0.39
CAPN3-209ENST00000466222 CLPXO76031 633 aa17.47■□□□□ 0.39
CAPN3-209ENST00000466222 ANKRD34CP0C6C1 535 aa17.47■□□□□ 0.39
CAPN3-209ENST00000466222 CD247P20963 164 aa17.47■□□□□ 0.39
CAPN3-209ENST00000466222 IGFBP5P24593 272 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms