RNA–Protein interactions for RNA: ENST00000465471.5

SKA3-205, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 5

Gene SKA3, Length 930 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-205ENST00000465471 TP53INP1Q96A56 240 aa18.8■□□□□ 0.6
SKA3-205ENST00000465471 CIDECQ96AQ7 238 aaPredicted RBP18.8■□□□□ 0.6
SKA3-205ENST00000465471 COQ8BQ96D53 544 aa18.8■□□□□ 0.6
SKA3-205ENST00000465471 GAL3ST4Q96RP7 486 aa18.8■□□□□ 0.6
SKA3-205ENST00000465471 BARD1Q99728 777 aaKnown RBP18.8■□□□□ 0.6
SKA3-205ENST00000465471 ACSS1Q9NUB1 689 aaPredicted RBP18.8■□□□□ 0.6
SKA3-205ENST00000465471 CFL2Q9Y281 166 aa18.8■□□□□ 0.6
SKA3-205ENST00000465471 USH1CQ9Y6N9 552 aa18.8■□□□□ 0.6
SKA3-205ENST00000465471 SHANK1Q9Y566 2161 aa18.79■□□□□ 0.6
SKA3-205ENST00000465471 C2orf92A0A1B0GVN3 265 aa18.79■□□□□ 0.6
SKA3-205ENST00000465471 BCAS2O75934 225 aaPredicted RBP18.79■□□□□ 0.6
SKA3-205ENST00000465471 OR6B1O95007 311 aa18.79■□□□□ 0.6
SKA3-205ENST00000465471 PSMG1O95456 288 aa18.79■□□□□ 0.6
SKA3-205ENST00000465471 SOX3P41225 446 aa18.79■□□□□ 0.6
SKA3-205ENST00000465471 OC90Q02509 493 aaPredicted RBP18.79■□□□□ 0.6
SKA3-205ENST00000465471 TLE1Q04724 770 aa18.79■□□□□ 0.6
SKA3-205ENST00000465471 INPP5JQ15735 1006 aaPredicted RBP18.79■□□□□ 0.6
SKA3-205ENST00000465471 PRR30Q53SZ7 412 aaPredicted RBP18.79■□□□□ 0.6
SKA3-205ENST00000465471 HSP90B2PQ58FF3 399 aa18.79■□□□□ 0.6
SKA3-205ENST00000465471 ZNF766Q5HY98 468 aa18.79■□□□□ 0.6
SKA3-205ENST00000465471 ZNF605Q86T29 641 aa18.79■□□□□ 0.6
SKA3-205ENST00000465471 OR2L13Q8N349 312 aa18.79■□□□□ 0.6
SKA3-205ENST00000465471 TMEM156Q8N614 296 aa18.79■□□□□ 0.6
SKA3-205ENST00000465471 HORMAD2Q8N7B1 307 aa18.79■□□□□ 0.6
SKA3-205ENST00000465471 ACTRT2Q8TDY3 377 aa18.79■□□□□ 0.6
SKA3-205ENST00000465471 ASB15Q8WXK1 588 aa18.79■□□□□ 0.6
SKA3-205ENST00000465471 ZBED6CLQ96FA7 236 aaPredicted RBP18.79■□□□□ 0.6
SKA3-205ENST00000465471 AIG1Q9NVV5 245 aa18.79■□□□□ 0.6
SKA3-205ENST00000465471 SH3BP4Q9P0V3 963 aa18.79■□□□□ 0.6
SKA3-205ENST00000465471 EXPH5Q8NEV8 1989 aa18.79■□□□□ 0.6
SKA3-205ENST00000465471 GOLGA8QA0A0J9YX86 632 aa18.78■□□□□ 0.6
SKA3-205ENST00000465471 GOLGA8OA6NCC3 632 aa18.78■□□□□ 0.6
SKA3-205ENST00000465471 TTLL8A6PVC2 850 aa18.78■□□□□ 0.6
SKA3-205ENST00000465471 GOLGA8NF8WBI6 632 aa18.78■□□□□ 0.6
SKA3-205ENST00000465471 SLC25A12O75746 678 aa18.78■□□□□ 0.6
SKA3-205ENST00000465471 TGDSO95455 350 aa18.78■□□□□ 0.6
SKA3-205ENST00000465471 LAMP1P11279 417 aa18.78■□□□□ 0.6
SKA3-205ENST00000465471 DDX5P17844 614 aaKnown RBP18.78■□□□□ 0.6
SKA3-205ENST00000465471 MC3RP41968 323 aa18.78■□□□□ 0.6
SKA3-205ENST00000465471 MLLT10P55197 1068 aa18.78■□□□□ 0.6
SKA3-205ENST00000465471 MLC1Q15049 377 aa18.78■□□□□ 0.6
SKA3-205ENST00000465471 OPN5Q6U736 354 aa18.78■□□□□ 0.6
SKA3-205ENST00000465471 EPGNQ6UW88 154 aa18.78■□□□□ 0.6
SKA3-205ENST00000465471 ZNF551Q7Z340 670 aaPredicted RBP18.78■□□□□ 0.6
SKA3-205ENST00000465471 SPATA19Q7Z5L4 167 aa18.78■□□□□ 0.6
SKA3-205ENST00000465471 CYP4Z2PQ8N1L4 340 aa18.78■□□□□ 0.6
SKA3-205ENST00000465471 ARFGAP2Q8N6H7 521 aa18.78■□□□□ 0.6
SKA3-205ENST00000465471 ZFP28Q8NHY6 868 aa18.78■□□□□ 0.6
SKA3-205ENST00000465471 SLC22A8Q8TCC7 542 aa18.78■□□□□ 0.6
SKA3-205ENST00000465471 NUDT8Q8WV74 236 aa18.78■□□□□ 0.6
SKA3-205ENST00000465471 SNRNP40Q96DI7 357 aaKnown RBP18.78■□□□□ 0.6
SKA3-205ENST00000465471 ELP4Q96EB1 424 aa18.78■□□□□ 0.6
SKA3-205ENST00000465471 ITPAQ9BY32 194 aa18.78■□□□□ 0.6
SKA3-205ENST00000465471 HES7Q9BYE0 225 aa18.78■□□□□ 0.6
SKA3-205ENST00000465471 ANKRA2Q9H9E1 313 aa18.78■□□□□ 0.6
SKA3-205ENST00000465471 PRODH2Q9UF12 536 aa18.78■□□□□ 0.6
SKA3-205ENST00000465471 BCAP29Q9UHQ4 241 aa18.78■□□□□ 0.6
SKA3-205ENST00000465471 C19orf53Q9UNZ5 99 aaPredicted RBP18.78■□□□□ 0.6
SKA3-205ENST00000465471 MAPRE3Q9UPY8 281 aa18.78■□□□□ 0.6
SKA3-205ENST00000465471 NTNG1Q9Y2I2 539 aa18.78■□□□□ 0.6
SKA3-205ENST00000465471 A8MVJ9 347 aa18.77■□□□□ 0.6
SKA3-205ENST00000465471 UPK1AO00322 258 aa18.77■□□□□ 0.6
SKA3-205ENST00000465471 NME2P1O60361 137 aa18.77■□□□□ 0.6
SKA3-205ENST00000465471 SP1P08047 785 aa18.77■□□□□ 0.6
SKA3-205ENST00000465471 FBXO45P0C2W1 286 aa18.77■□□□□ 0.6
SKA3-205ENST00000465471 PLA2G2AP14555 144 aa18.77■□□□□ 0.6
SKA3-205ENST00000465471 CD46P15529 392 aa18.77■□□□□ 0.6
SKA3-205ENST00000465471 NME2P22392 152 aa18.77■□□□□ 0.6
SKA3-205ENST00000465471 ZNF791Q3KP31 576 aaPredicted RBP18.77■□□□□ 0.6
SKA3-205ENST00000465471 CPTPQ5TA50 214 aa18.77■□□□□ 0.6
SKA3-205ENST00000465471 SLC25A25Q6KCM7 469 aa18.77■□□□□ 0.6
SKA3-205ENST00000465471 TMEM107Q6UX40 140 aa18.77■□□□□ 0.6
SKA3-205ENST00000465471 NATD1Q8N6N6 113 aa18.77■□□□□ 0.6
SKA3-205ENST00000465471 CPT1CQ8TCG5 803 aa18.77■□□□□ 0.6
SKA3-205ENST00000465471 MIB2Q96AX9 1013 aa18.77■□□□□ 0.6
SKA3-205ENST00000465471 VSTM2LQ96N03 204 aa18.77■□□□□ 0.6
SKA3-205ENST00000465471 OR52B2Q96RD2 323 aa18.77■□□□□ 0.6
SKA3-205ENST00000465471 TAAR6Q96RI8 345 aa18.77■□□□□ 0.6
SKA3-205ENST00000465471 BHLHE41Q9C0J9 482 aaPredicted RBP18.77■□□□□ 0.6
SKA3-205ENST00000465471 NXF5Q9H1B4 397 aaKnown RBP18.77■□□□□ 0.6
SKA3-205ENST00000465471 SH2D2AQ9NP31 389 aa18.77■□□□□ 0.6
SKA3-205ENST00000465471 ATAD3AQ9NVI7 634 aa18.77■□□□□ 0.6
SKA3-205ENST00000465471 HPF1Q9NWY4 346 aa18.77■□□□□ 0.6
SKA3-205ENST00000465471 NTMQ9P121 344 aa18.77■□□□□ 0.6
SKA3-205ENST00000465471 MAP10Q9P2G4 905 aa18.77■□□□□ 0.6
SKA3-205ENST00000465471 GPR45Q9Y5Y3 372 aa18.77■□□□□ 0.6
SKA3-205ENST00000465471 NR0B1P51843 470 aaKnown RBP18.76■□□□□ 0.59
SKA3-205ENST00000465471 DCAF7P61962 342 aa18.76■□□□□ 0.59
SKA3-205ENST00000465471 HLA-DQA1Q5Y7H0 255 aa18.76■□□□□ 0.59
SKA3-205ENST00000465471 IL20RBQ6UXL0 311 aa18.76■□□□□ 0.59
SKA3-205ENST00000465471 FAM47EQ6ZV65 393 aa18.76■□□□□ 0.59
SKA3-205ENST00000465471 MDGA2Q7Z553 956 aa18.76■□□□□ 0.59
SKA3-205ENST00000465471 DND1Q8IYX4 353 aaKnown RBP18.76■□□□□ 0.59
SKA3-205ENST00000465471 CISD2Q8N5K1 135 aaKnown RBP18.76■□□□□ 0.59
SKA3-205ENST00000465471 GOLM1Q8NBJ4 401 aa18.76■□□□□ 0.59
SKA3-205ENST00000465471 TMEM178AQ8NBL3 297 aa18.76■□□□□ 0.59
SKA3-205ENST00000465471 PSMA8Q8TAA3 256 aa18.76■□□□□ 0.59
SKA3-205ENST00000465471 TESCQ96BS2 214 aa18.76■□□□□ 0.59
SKA3-205ENST00000465471 SPACA9Q96E40 222 aaPredicted RBP18.76■□□□□ 0.59
SKA3-205ENST00000465471 C5orf34Q96MH7 638 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms