RNA–Protein interactions for RNA: ENST00000465132.1

CPSF4-209, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 927 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-209ENST00000465132 MANFP55145 182 aaKnown RBP16.24■□□□□ 0.19
CPSF4-209ENST00000465132 KCNK10P57789 538 aa16.24■□□□□ 0.19
CPSF4-209ENST00000465132 CEBPEQ15744 281 aa16.24■□□□□ 0.19
CPSF4-209ENST00000465132 PGS1Q32NB8 556 aa16.24■□□□□ 0.19
CPSF4-209ENST00000465132 C1QL3Q5VWW1 255 aa16.24■□□□□ 0.19
CPSF4-209ENST00000465132 FAAH2Q6GMR7 532 aa16.24■□□□□ 0.19
CPSF4-209ENST00000465132 CGB2Q6NT52 195 aa16.24■□□□□ 0.19
CPSF4-209ENST00000465132 MSANTD1Q6ZTZ1 278 aa16.24■□□□□ 0.19
CPSF4-209ENST00000465132 GALNT12Q8IXK2 581 aa16.24■□□□□ 0.19
CPSF4-209ENST00000465132 RIMKLAQ8IXN7 391 aa16.24■□□□□ 0.19
CPSF4-209ENST00000465132 TMEM52Q8NDY8 209 aa16.24■□□□□ 0.19
CPSF4-209ENST00000465132 CATSPER1Q8NEC5 780 aa16.24■□□□□ 0.19
CPSF4-209ENST00000465132 OR8J2Q8NGG1 315 aa16.24■□□□□ 0.19
CPSF4-209ENST00000465132 TSPEARQ8WU66 669 aa16.24■□□□□ 0.19
CPSF4-209ENST00000465132 C10orf82Q8WW14 230 aa16.24■□□□□ 0.19
CPSF4-209ENST00000465132 RIT1Q92963 219 aa16.24■□□□□ 0.19
CPSF4-209ENST00000465132 SLX1AQ9BQ83 275 aa16.24■□□□□ 0.19
CPSF4-209ENST00000465132 DUSP26Q9BV47 211 aa16.24■□□□□ 0.19
CPSF4-209ENST00000465132 RMND5AQ9H871 391 aa16.24■□□□□ 0.19
CPSF4-209ENST00000465132 ZNF160Q9HCG1 818 aa16.24■□□□□ 0.19
CPSF4-209ENST00000465132 FAM120CQ9NX05 1096 aaKnown RBP16.24■□□□□ 0.19
CPSF4-209ENST00000465132 DOCK10Q96BY6 2186 aa16.24■□□□□ 0.19
CPSF4-209ENST00000465132 FAM234BA2RU67 622 aa16.23■□□□□ 0.19
CPSF4-209ENST00000465132 MYO1GB0I1T2 1018 aa16.23■□□□□ 0.19
CPSF4-209ENST00000465132 POLR2JP52435 117 aaKnown RBP16.23■□□□□ 0.19
CPSF4-209ENST00000465132 MLC1Q15049 377 aa16.23■□□□□ 0.19
CPSF4-209ENST00000465132 TMEM198Q66K66 360 aa16.23■□□□□ 0.19
CPSF4-209ENST00000465132 RPUSD3Q6P087 351 aaKnown RBP16.23■□□□□ 0.19
CPSF4-209ENST00000465132 FAM180AQ6UWF9 173 aa16.23■□□□□ 0.19
CPSF4-209ENST00000465132 RIPOR1Q6ZS17 1223 aa16.23■□□□□ 0.19
CPSF4-209ENST00000465132 PIGWQ7Z7B1 504 aa16.23■□□□□ 0.19
CPSF4-209ENST00000465132 OR4N5Q8IXE1 308 aa16.23■□□□□ 0.19
CPSF4-209ENST00000465132 SLC34A3Q8N130 599 aa16.23■□□□□ 0.19
CPSF4-209ENST00000465132 CPSF7Q8N684 471 aaKnown RBP16.23■□□□□ 0.19
CPSF4-209ENST00000465132 M1APQ8TC57 530 aa16.23■□□□□ 0.19
CPSF4-209ENST00000465132 TSLPQ969D9 159 aa16.23■□□□□ 0.19
CPSF4-209ENST00000465132 C8orf44Q96CB5 159 aa16.23■□□□□ 0.19
CPSF4-209ENST00000465132 NEUROD4Q9HD90 331 aa16.23■□□□□ 0.19
CPSF4-209ENST00000465132 CFL2Q9Y281 166 aa16.23■□□□□ 0.19
CPSF4-209ENST00000465132 IGHV1-45A0A0A0MS14 117 aa16.22■□□□□ 0.19
CPSF4-209ENST00000465132 A0A1W2PRB8 838 aa16.22■□□□□ 0.19
CPSF4-209ENST00000465132 SAGE2PA6NJ88 616 aa16.22■□□□□ 0.19
CPSF4-209ENST00000465132 C17orf105B2RV13 164 aa16.22■□□□□ 0.19
CPSF4-209ENST00000465132 NDUFAB1O14561 156 aa16.22■□□□□ 0.19
CPSF4-209ENST00000465132 CFLARO15519 480 aa16.22■□□□□ 0.19
CPSF4-209ENST00000465132 PRKRAO75569 313 aaKnown RBP16.22■□□□□ 0.19
CPSF4-209ENST00000465132 NT5EP21589 574 aa16.22■□□□□ 0.19
CPSF4-209ENST00000465132 GPC1P35052 558 aa16.22■□□□□ 0.19
CPSF4-209ENST00000465132 FEN1P39748 380 aaKnown RBP16.22■□□□□ 0.19
CPSF4-209ENST00000465132 NCBP2P52298 156 aaKnown RBP eCLIP16.22■□□□□ 0.19
CPSF4-209ENST00000465132 SPRED3Q2MJR0 410 aa16.22■□□□□ 0.19
CPSF4-209ENST00000465132 BHLHB9Q6PI77 547 aa16.22■□□□□ 0.19
CPSF4-209ENST00000465132 PAPD4Q6PIY7 484 aaKnown RBP16.22■□□□□ 0.19
CPSF4-209ENST00000465132 KBTBD2Q8IY47 623 aa16.22■□□□□ 0.19
CPSF4-209ENST00000465132 KRTCAP2Q8N6L1 136 aa16.22■□□□□ 0.19
CPSF4-209ENST00000465132 TRIML2Q8N7C3 387 aa16.22■□□□□ 0.19
CPSF4-209ENST00000465132 BCORP1Q8N888 145 aa16.22■□□□□ 0.19
CPSF4-209ENST00000465132 OR7G1Q8NGA0 311 aa16.22■□□□□ 0.19
CPSF4-209ENST00000465132 DNAJB8Q8NHS0 232 aa16.22■□□□□ 0.19
CPSF4-209ENST00000465132 ZNF675Q8TD23 568 aa16.22■□□□□ 0.19
CPSF4-209ENST00000465132 OR5P2Q8WZ92 322 aa16.22■□□□□ 0.19
CPSF4-209ENST00000465132 MOAP1Q96BY2 351 aa16.22■□□□□ 0.19
CPSF4-209ENST00000465132 CNRIP1Q96F85 164 aaPredicted RBP16.22■□□□□ 0.19
CPSF4-209ENST00000465132 C3orf14Q9HBI5 128 aa16.22■□□□□ 0.19
CPSF4-209ENST00000465132 OLAHQ9NV23 265 aa16.22■□□□□ 0.19
CPSF4-209ENST00000465132 CELSR2Q9HCU4 2923 aa16.22■□□□□ 0.19
CPSF4-209ENST00000465132 PRSS51A0A1B0GVH4 220 aa16.21■□□□□ 0.19
CPSF4-209ENST00000465132 RNASET2O00584 256 aaKnown RBP16.21■□□□□ 0.19
CPSF4-209ENST00000465132 ANKRD28O15084 1053 aa16.21■□□□□ 0.19
CPSF4-209ENST00000465132 ZG16O60844 167 aa16.21■□□□□ 0.19
CPSF4-209ENST00000465132 SOX30O94993 753 aa16.21■□□□□ 0.19
CPSF4-209ENST00000465132 PGRP06401 933 aa16.21■□□□□ 0.19
CPSF4-209ENST00000465132 STSP08842 583 aa16.21■□□□□ 0.19
CPSF4-209ENST00000465132 GPX3P22352 226 aa16.21■□□□□ 0.19
CPSF4-209ENST00000465132 SOX11P35716 441 aa16.21■□□□□ 0.19
CPSF4-209ENST00000465132 UFM1P61960 85 aa16.21■□□□□ 0.19
CPSF4-209ENST00000465132 ID2Q02363 134 aa16.21■□□□□ 0.19
CPSF4-209ENST00000465132 EEF1A2Q05639 463 aaKnown RBP16.21■□□□□ 0.19
CPSF4-209ENST00000465132 MAP4K2Q12851 820 aa16.21■□□□□ 0.19
CPSF4-209ENST00000465132 FAM174BQ3ZCQ3 159 aa16.21■□□□□ 0.19
CPSF4-209ENST00000465132 PLAG1Q6DJT9 500 aa16.21■□□□□ 0.19
CPSF4-209ENST00000465132 LANCL3Q6ZV70 420 aa16.21■□□□□ 0.19
CPSF4-209ENST00000465132 CCDC116Q8IYX3 515 aa16.21■□□□□ 0.19
CPSF4-209ENST00000465132 CCDC197Q8NCU1 140 aa16.21■□□□□ 0.19
CPSF4-209ENST00000465132 B3GNT7Q8NFL0 401 aa16.21■□□□□ 0.19
CPSF4-209ENST00000465132 OR7A2PQ8NGA2 310 aa16.21■□□□□ 0.19
CPSF4-209ENST00000465132 OR1N1Q8NGS0 311 aa16.21■□□□□ 0.19
CPSF4-209ENST00000465132 PSMF1Q92530 271 aa16.21■□□□□ 0.19
CPSF4-209ENST00000465132 VMP1Q96GC9 406 aa16.21■□□□□ 0.19
CPSF4-209ENST00000465132 FBXL20Q96IG2 436 aa16.21■□□□□ 0.19
CPSF4-209ENST00000465132 ZNF681Q96N22 645 aa16.21■□□□□ 0.19
CPSF4-209ENST00000465132 OR52E6Q96RD3 313 aa16.21■□□□□ 0.19
CPSF4-209ENST00000465132 PTGFRNQ9P2B2 879 aa16.21■□□□□ 0.19
CPSF4-209ENST00000465132 PPIEQ9UNP9 301 aaKnown RBP16.21■□□□□ 0.19
CPSF4-209ENST00000465132 CNTRLQ7Z7A1 2325 aa16.2■□□□□ 0.18
CPSF4-209ENST00000465132 CCDC154A6NI56 674 aa16.2■□□□□ 0.18
CPSF4-209ENST00000465132 OR6C76A6NM76 312 aa16.2■□□□□ 0.18
CPSF4-209ENST00000465132 COQ9O75208 318 aa16.2■□□□□ 0.18
CPSF4-209ENST00000465132 SERPINA7P05543 415 aa16.2■□□□□ 0.18
CPSF4-209ENST00000465132 LAMP1P11279 417 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms