RNA–Protein interactions for RNA: ENST00000463908.2

LMNB1-204, Transcript of lamin B1, humanhuman

TSL 4

Gene LMNB1, Length 557 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-204ENST00000463908 Q6ZS92 163 aa17.54■□□□□ 0.4
LMNB1-204ENST00000463908 ZNF227Q86WZ6 799 aa17.54■□□□□ 0.4
LMNB1-204ENST00000463908 ZADH2Q8N4Q0 377 aa17.54■□□□□ 0.4
LMNB1-204ENST00000463908 ZNF441Q8N8Z8 693 aa17.54■□□□□ 0.4
LMNB1-204ENST00000463908 OR8J2Q8NGG1 315 aa17.54■□□□□ 0.4
LMNB1-204ENST00000463908 STON2Q8WXE9 905 aa17.54■□□□□ 0.4
LMNB1-204ENST00000463908 ERP27Q96DN0 273 aa17.54■□□□□ 0.4
LMNB1-204ENST00000463908 ZBED6CLQ96FA7 236 aaPredicted RBP17.54■□□□□ 0.4
LMNB1-204ENST00000463908 BHLHE41Q9C0J9 482 aaPredicted RBP17.54■□□□□ 0.4
LMNB1-204ENST00000463908 WWTR1Q9GZV5 400 aa17.54■□□□□ 0.4
LMNB1-204ENST00000463908 RNF32Q9H0A6 362 aa17.54■□□□□ 0.4
LMNB1-204ENST00000463908 CLMPQ9H6B4 373 aa17.54■□□□□ 0.4
LMNB1-204ENST00000463908 SDR39U1Q9NRG7 319 aaPredicted RBP17.54■□□□□ 0.4
LMNB1-204ENST00000463908 SDAD1Q9NVU7 687 aaKnown RBP eCLIP17.54■□□□□ 0.43e-8■□□□□ 8.3
LMNB1-204ENST00000463908 ANKRD10Q9NXR5 420 aa17.54■□□□□ 0.4
LMNB1-204ENST00000463908 BCAP29Q9UHQ4 241 aa17.54■□□□□ 0.4
LMNB1-204ENST00000463908 MAPRE3Q9UPY8 281 aa17.54■□□□□ 0.4
LMNB1-204ENST00000463908 YARS2Q9Y2Z4 477 aaKnown RBP17.54■□□□□ 0.4
LMNB1-204ENST00000463908 A0A087WV62 115 aa17.53■□□□□ 0.4
LMNB1-204ENST00000463908 A0A1W2PRB8 838 aa17.53■□□□□ 0.4
LMNB1-204ENST00000463908 C9JVG2 144 aa17.53■□□□□ 0.4
LMNB1-204ENST00000463908 E9PBE3 544 aa17.53■□□□□ 0.4
LMNB1-204ENST00000463908 UPK1AO00322 258 aa17.53■□□□□ 0.4
LMNB1-204ENST00000463908 POLR3GO15318 223 aaPredicted RBP17.53■□□□□ 0.4
LMNB1-204ENST00000463908 NADKO95544 446 aaPredicted RBP17.53■□□□□ 0.4
LMNB1-204ENST00000463908 IDO1P14902 403 aa17.53■□□□□ 0.4
LMNB1-204ENST00000463908 TRHRP34981 398 aaPredicted RBP17.53■□□□□ 0.4
LMNB1-204ENST00000463908 ZFP36L2P47974 494 aaKnown RBP17.53■□□□□ 0.4
LMNB1-204ENST00000463908 CDK9P50750 372 aaKnown RBP17.53■□□□□ 0.4
LMNB1-204ENST00000463908 NFATC3Q12968 1075 aa17.53■□□□□ 0.4
LMNB1-204ENST00000463908 HSPB3Q12988 150 aa17.53■□□□□ 0.4
LMNB1-204ENST00000463908 GSTA3Q16772 222 aa17.53■□□□□ 0.4
LMNB1-204ENST00000463908 PIGGQ5H8A4 983 aa17.53■□□□□ 0.4
LMNB1-204ENST00000463908 C6orf163Q5TEZ5 329 aa17.53■□□□□ 0.4
LMNB1-204ENST00000463908 OR4F3Q6IEY1 312 aa17.53■□□□□ 0.4
LMNB1-204ENST00000463908 SLC29A4Q7RTT9 530 aa17.53■□□□□ 0.4
LMNB1-204ENST00000463908 TM9SF4Q92544 642 aa17.53■□□□□ 0.4
LMNB1-204ENST00000463908 TESCQ96BS2 214 aa17.53■□□□□ 0.4
LMNB1-204ENST00000463908 SIGLEC12Q96PQ1 595 aa17.53■□□□□ 0.4
LMNB1-204ENST00000463908 RASL10BQ96S79 203 aa17.53■□□□□ 0.4
LMNB1-204ENST00000463908 TRIM45Q9H8W5 580 aaPredicted RBP17.53■□□□□ 0.4
LMNB1-204ENST00000463908 SIRT3Q9NTG7 399 aaPredicted RBP17.53■□□□□ 0.4
LMNB1-204ENST00000463908 C19orf53Q9UNZ5 99 aaPredicted RBP17.53■□□□□ 0.4
LMNB1-204ENST00000463908 MAST4O15021 2626 aa17.52■□□□□ 0.4
LMNB1-204ENST00000463908 A0A0G2JND7 137 aa17.52■□□□□ 0.4
LMNB1-204ENST00000463908 C2orf92A0A1B0GVN3 265 aa17.52■□□□□ 0.4
LMNB1-204ENST00000463908 OR5H15A6NDH6 313 aa17.52■□□□□ 0.4
LMNB1-204ENST00000463908 SLITRK5O94991 958 aa17.52■□□□□ 0.4
LMNB1-204ENST00000463908 GPX3P22352 226 aa17.52■□□□□ 0.4
LMNB1-204ENST00000463908 TNFSF10P50591 281 aa17.52■□□□□ 0.4
LMNB1-204ENST00000463908 ARG2P78540 354 aa17.52■□□□□ 0.4
LMNB1-204ENST00000463908 SRSF11Q05519 484 aaKnown RBP17.52■□□□□ 0.4
LMNB1-204ENST00000463908 SF3A3Q12874 501 aaKnown RBP eCLIP17.52■□□□□ 0.4
LMNB1-204ENST00000463908 RPS6KA2Q15349 733 aa17.52■□□□□ 0.4
LMNB1-204ENST00000463908 SPANXN4Q5MJ08 99 aa17.52■□□□□ 0.4
LMNB1-204ENST00000463908 SLC6A19Q695T7 634 aa17.52■□□□□ 0.4
LMNB1-204ENST00000463908 SPINK14Q6IE38 97 aa17.52■□□□□ 0.4
LMNB1-204ENST00000463908 LYPD8Q6UX82 237 aa17.52■□□□□ 0.4
LMNB1-204ENST00000463908 OR2L13Q8N349 312 aa17.52■□□□□ 0.4
LMNB1-204ENST00000463908 NATD1Q8N6N6 113 aa17.52■□□□□ 0.4
LMNB1-204ENST00000463908 OR5P2Q8WZ92 322 aa17.52■□□□□ 0.4
LMNB1-204ENST00000463908 TP53INP1Q96A56 240 aa17.52■□□□□ 0.4
LMNB1-204ENST00000463908 MAGED4Q96JG8 741 aa17.52■□□□□ 0.4
LMNB1-204ENST00000463908 GAL3ST4Q96RP7 486 aa17.52■□□□□ 0.4
LMNB1-204ENST00000463908 SIKE1Q9BRV8 207 aa17.52■□□□□ 0.4
LMNB1-204ENST00000463908 TRIM4Q9C037 500 aa17.52■□□□□ 0.4
LMNB1-204ENST00000463908 ATAD3AQ9NVI7 634 aa17.52■□□□□ 0.4
LMNB1-204ENST00000463908 NTMQ9P121 344 aa17.52■□□□□ 0.4
LMNB1-204ENST00000463908 CPAMD8Q8IZJ3 1885 aa17.52■□□□□ 0.39
LMNB1-204ENST00000463908 DYTNA2CJ06 578 aa17.51■□□□□ 0.39
LMNB1-204ENST00000463908 CDK2AP1O14519 115 aa17.51■□□□□ 0.39
LMNB1-204ENST00000463908 PRAMEF2O60811 474 aa17.51■□□□□ 0.39
LMNB1-204ENST00000463908 SLC22A3O75751 556 aa17.51■□□□□ 0.39
LMNB1-204ENST00000463908 BCAS2O75934 225 aaPredicted RBP17.51■□□□□ 0.39
LMNB1-204ENST00000463908 PSMG1O95456 288 aa17.51■□□□□ 0.39
LMNB1-204ENST00000463908 C6orf47O95873 294 aa17.51■□□□□ 0.39
LMNB1-204ENST00000463908 IFI6P09912 130 aa17.51■□□□□ 0.39
LMNB1-204ENST00000463908 DDX5P17844 614 aaKnown RBP17.51■□□□□ 0.39
LMNB1-204ENST00000463908 MRPL19P49406 292 aaKnown RBP17.51■□□□□ 0.39
LMNB1-204ENST00000463908 HLCSP50747 726 aa17.51■□□□□ 0.39
LMNB1-204ENST00000463908 DGKQP52824 942 aa17.51■□□□□ 0.39
LMNB1-204ENST00000463908 CLNS1AP54105 237 aaKnown RBP17.51■□□□□ 0.39
LMNB1-204ENST00000463908 KLRB1Q12918 225 aa17.51■□□□□ 0.39
LMNB1-204ENST00000463908 PAOXQ6QHF9 649 aa17.51■□□□□ 0.39
LMNB1-204ENST00000463908 CLECL1Q8IZS7 167 aa17.51■□□□□ 0.39
LMNB1-204ENST00000463908 TEX19Q8NA77 164 aa17.51■□□□□ 0.39
LMNB1-204ENST00000463908 Q8NA96 180 aa17.51■□□□□ 0.39
LMNB1-204ENST00000463908 ZFP28Q8NHY6 868 aa17.51■□□□□ 0.39
LMNB1-204ENST00000463908 PSMA8Q8TAA3 256 aa17.51■□□□□ 0.39
LMNB1-204ENST00000463908 UTP23Q9BRU9 249 aaKnown RBP17.51■□□□□ 0.39
LMNB1-204ENST00000463908 ITPAQ9BY32 194 aa17.51■□□□□ 0.39
LMNB1-204ENST00000463908 ZIM2Q9NZV7 527 aa17.51■□□□□ 0.39
LMNB1-204ENST00000463908 B3GNT3Q9Y2A9 372 aa17.51■□□□□ 0.39
LMNB1-204ENST00000463908 GPR55Q9Y2T6 319 aaPredicted RBP17.51■□□□□ 0.39
LMNB1-204ENST00000463908 HEMK1Q9Y5R4 338 aaPredicted RBP17.51■□□□□ 0.39
LMNB1-204ENST00000463908 PRSS51A0A1B0GVH4 220 aa17.5■□□□□ 0.39
LMNB1-204ENST00000463908 FCHO1O14526 889 aa17.5■□□□□ 0.39
LMNB1-204ENST00000463908 NEURL1O76050 574 aa17.5■□□□□ 0.39
LMNB1-204ENST00000463908 OR6B1O95007 311 aa17.5■□□□□ 0.39
LMNB1-204ENST00000463908 PLA2G2AP14555 144 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms