RNA–Protein interactions for RNA: ENST00000463060.5

COL6A1-202, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 5

Gene COL6A1, Length 863 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-202ENST00000463060 IL17BQ9UHF5 180 aa13.37□□□□□ -0.27
COL6A1-202ENST00000463060 KCND3Q9UK17 655 aa13.37□□□□□ -0.27
COL6A1-202ENST00000463060 SNX8Q9Y5X2 465 aa13.37□□□□□ -0.27
COL6A1-202ENST00000463060 PCSK5Q92824 1860 aa13.36□□□□□ -0.27
COL6A1-202ENST00000463060 C15orf38-AP3S2A0A0A6YYH1 394 aa13.36□□□□□ -0.27
COL6A1-202ENST00000463060 IGHV3-20A0A0C4DH32 117 aa13.36□□□□□ -0.27
COL6A1-202ENST00000463060 RNF103-CHMP3A0A140T963 221 aa13.36□□□□□ -0.27
COL6A1-202ENST00000463060 BCAS2O75934 225 aaPredicted RBP13.36□□□□□ -0.27
COL6A1-202ENST00000463060 ADRB1P08588 477 aa13.36□□□□□ -0.27
COL6A1-202ENST00000463060 BMP2P12643 396 aa13.36□□□□□ -0.27
COL6A1-202ENST00000463060 TNNI3P19429 210 aa13.36□□□□□ -0.27
COL6A1-202ENST00000463060 PPIBP23284 216 aaKnown RBP13.36□□□□□ -0.27
COL6A1-202ENST00000463060 SSTR4P31391 388 aa13.36□□□□□ -0.27
COL6A1-202ENST00000463060 MAGEA8P43361 318 aa13.36□□□□□ -0.27
COL6A1-202ENST00000463060 EMDP50402 254 aa13.36□□□□□ -0.27
COL6A1-202ENST00000463060 SLC7A2P52569 658 aa13.36□□□□□ -0.27
COL6A1-202ENST00000463060 SLC37A1P57057 533 aa13.36□□□□□ -0.27
COL6A1-202ENST00000463060 MTPNP58546 118 aa13.36□□□□□ -0.27
COL6A1-202ENST00000463060 MXRA7P84157 204 aa13.36□□□□□ -0.27
COL6A1-202ENST00000463060 PRR5P85299 388 aa13.36□□□□□ -0.27
COL6A1-202ENST00000463060 RGNQ15493 299 aa13.36□□□□□ -0.27
COL6A1-202ENST00000463060 DNAL1Q4LDG9 190 aa13.36□□□□□ -0.27
COL6A1-202ENST00000463060 COX20Q5RI15 118 aa13.36□□□□□ -0.27
COL6A1-202ENST00000463060 ARPINQ7Z6K5 226 aa13.36□□□□□ -0.27
COL6A1-202ENST00000463060 AMER2Q8N7J2 671 aa13.36□□□□□ -0.27
COL6A1-202ENST00000463060 ZNF321PQ8N8H1 164 aa13.36□□□□□ -0.27
COL6A1-202ENST00000463060 APCDD1LQ8NCL9 501 aa13.36□□□□□ -0.27
COL6A1-202ENST00000463060 OR7G1Q8NGA0 311 aa13.36□□□□□ -0.27
COL6A1-202ENST00000463060 OR56A1Q8NGH5 318 aa13.36□□□□□ -0.27
COL6A1-202ENST00000463060 OR52N2Q8NGI0 321 aa13.36□□□□□ -0.27
COL6A1-202ENST00000463060 ADAMTS17Q8TE56 1095 aa13.36□□□□□ -0.27
COL6A1-202ENST00000463060 DAZLQ92904 295 aaKnown RBP13.36□□□□□ -0.27
COL6A1-202ENST00000463060 C8orf44Q96CB5 159 aa13.36□□□□□ -0.27
COL6A1-202ENST00000463060 ZNF583Q96ND8 569 aa13.36□□□□□ -0.27
COL6A1-202ENST00000463060 CDRT15Q96T59 188 aa13.36□□□□□ -0.27
COL6A1-202ENST00000463060 SH3GL1Q99961 368 aa13.36□□□□□ -0.27
COL6A1-202ENST00000463060 NUDT9Q9BW91 350 aa13.36□□□□□ -0.27
COL6A1-202ENST00000463060 SEMA4CQ9C0C4 833 aa13.36□□□□□ -0.27
COL6A1-202ENST00000463060 SPAG4Q9NPE6 437 aa13.36□□□□□ -0.27
COL6A1-202ENST00000463060 DDX18Q9NVP1 670 aaKnown RBP13.36□□□□□ -0.27
COL6A1-202ENST00000463060 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.36□□□□□ -0.27
COL6A1-202ENST00000463060 DKK4Q9UBT3 224 aa13.36□□□□□ -0.27
COL6A1-202ENST00000463060 C19orf25Q9UFG5 118 aaPredicted RBP13.36□□□□□ -0.27
COL6A1-202ENST00000463060 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.36□□□□□ -0.27
COL6A1-202ENST00000463060 CLCA3PQ9Y6N3 262 aa13.36□□□□□ -0.27
COL6A1-202ENST00000463060 CACNA1AO00555 2505 aa13.35□□□□□ -0.27
COL6A1-202ENST00000463060 IGHV1-45A0A0A0MS14 117 aa13.35□□□□□ -0.27
COL6A1-202ENST00000463060 MED19A0JLT2 244 aaPredicted RBP13.35□□□□□ -0.27
COL6A1-202ENST00000463060 PRORSD1PA6NEY8 169 aa13.35□□□□□ -0.27
COL6A1-202ENST00000463060 SAGE2PA6NJ88 616 aa13.35□□□□□ -0.27
COL6A1-202ENST00000463060 TNFRSF21O75509 655 aa13.35□□□□□ -0.27
COL6A1-202ENST00000463060 CREG1O75629 220 aa13.35□□□□□ -0.27
COL6A1-202ENST00000463060 DNAJC8O75937 253 aaPredicted RBP13.35□□□□□ -0.27
COL6A1-202ENST00000463060 KRT75O95678 551 aa13.35□□□□□ -0.27
COL6A1-202ENST00000463060 CAPNS1P04632 268 aa13.35□□□□□ -0.27
COL6A1-202ENST00000463060 HMGN2P05204 90 aaKnown RBP13.35□□□□□ -0.27
COL6A1-202ENST00000463060 LIFP15018 202 aa13.35□□□□□ -0.27
COL6A1-202ENST00000463060 SOAT1P35610 550 aa13.35□□□□□ -0.27
COL6A1-202ENST00000463060 CLN3Q13286 438 aa13.35□□□□□ -0.27
COL6A1-202ENST00000463060 IL10RAQ13651 578 aa13.35□□□□□ -0.27
COL6A1-202ENST00000463060 CEACAM7Q14002 265 aa13.35□□□□□ -0.27
COL6A1-202ENST00000463060 EXOSC7Q15024 291 aaKnown RBP13.35□□□□□ -0.27
COL6A1-202ENST00000463060 ADRM1Q16186 407 aa13.35□□□□□ -0.27
COL6A1-202ENST00000463060 SPDYE7PQ495Y7 208 aa13.35□□□□□ -0.27
COL6A1-202ENST00000463060 PIGGQ5H8A4 983 aa13.35□□□□□ -0.27
COL6A1-202ENST00000463060 MFSD12Q6NUT3 480 aa13.35□□□□□ -0.27
COL6A1-202ENST00000463060 PAPD4Q6PIY7 484 aaKnown RBP13.35□□□□□ -0.27
COL6A1-202ENST00000463060 NET1Q7Z628 596 aaPredicted RBP13.35□□□□□ -0.27
COL6A1-202ENST00000463060 ARHGAP24Q8N264 748 aa13.35□□□□□ -0.27
COL6A1-202ENST00000463060 IL22RA1Q8N6P7 574 aa13.35□□□□□ -0.27
COL6A1-202ENST00000463060 ZSCAN1Q8NBB4 408 aa13.35□□□□□ -0.27
COL6A1-202ENST00000463060 OR11G2Q8NGC1 345 aa13.35□□□□□ -0.27
COL6A1-202ENST00000463060 OR52R1Q8NGF1 315 aa13.35□□□□□ -0.27
COL6A1-202ENST00000463060 OR1N1Q8NGS0 311 aa13.35□□□□□ -0.27
COL6A1-202ENST00000463060 SLC2A12Q8TD20 617 aa13.35□□□□□ -0.27
COL6A1-202ENST00000463060 FGF11Q92914 225 aa13.35□□□□□ -0.27
COL6A1-202ENST00000463060 UTP4Q969X6 686 aaKnown RBP13.35□□□□□ -0.27
COL6A1-202ENST00000463060 C16orf58Q96GQ5 468 aa13.35□□□□□ -0.27
COL6A1-202ENST00000463060 MAGED4Q96JG8 741 aa13.35□□□□□ -0.27
COL6A1-202ENST00000463060 THUMPD3Q9BV44 507 aaKnown RBP13.35□□□□□ -0.27
COL6A1-202ENST00000463060 OR10A5Q9H207 317 aa13.35□□□□□ -0.27
COL6A1-202ENST00000463060 GMPR2Q9P2T1 348 aaKnown RBP13.35□□□□□ -0.27
COL6A1-202ENST00000463060 ZNF223Q9UK11 482 aaPredicted RBP13.35□□□□□ -0.27
COL6A1-202ENST00000463060 PRPF19Q9UMS4 504 aaKnown RBP13.35□□□□□ -0.27
COL6A1-202ENST00000463060 ERVK-19Q9WJR5 959 aa13.35□□□□□ -0.27
COL6A1-202ENST00000463060 SSUH2Q9Y2M2 353 aa13.35□□□□□ -0.27
COL6A1-202ENST00000463060 MRPS18BQ9Y676 258 aaKnown RBP13.35□□□□□ -0.27
COL6A1-202ENST00000463060 ERICH4A6NGS2 130 aa13.34□□□□□ -0.27
COL6A1-202ENST00000463060 EVPLLA8MZ36 301 aa13.34□□□□□ -0.27
COL6A1-202ENST00000463060 TLX3O43711 291 aaPredicted RBP13.34□□□□□ -0.27
COL6A1-202ENST00000463060 NME6O75414 186 aaPredicted RBP13.34□□□□□ -0.27
COL6A1-202ENST00000463060 COX6A1P12074 109 aa13.34□□□□□ -0.27
COL6A1-202ENST00000463060 CHI3L1P36222 383 aaPredicted RBP13.34□□□□□ -0.27
COL6A1-202ENST00000463060 PGDP52209 483 aa13.34□□□□□ -0.27
COL6A1-202ENST00000463060 PRKAG1P54619 331 aa13.34□□□□□ -0.27
COL6A1-202ENST00000463060 EEFSECP57772 596 aaKnown RBP13.34□□□□□ -0.27
COL6A1-202ENST00000463060 TP53BP2Q13625 1128 aa13.34□□□□□ -0.27
COL6A1-202ENST00000463060 SPATS1Q496A3 300 aa13.34□□□□□ -0.27
COL6A1-202ENST00000463060 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.34□□□□□ -0.27
COL6A1-202ENST00000463060 ZCCHC12Q6PEW1 402 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms