RNA–Protein interactions for RNA: ENST00000463007.5

HDAC4-208, Transcript of histone deacetylase 4, humanhuman

TSL 1 (best)

Gene HDAC4, Length 3,158 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-208ENST00000463007 PRKRAO75569 313 aaKnown RBP11.76□□□□□ -0.53
HDAC4-208ENST00000463007 RHCEP18577 417 aa11.76□□□□□ -0.53
HDAC4-208ENST00000463007 PPIBP23284 216 aaKnown RBP11.76□□□□□ -0.53
HDAC4-208ENST00000463007 P2RX3P56373 397 aa11.76□□□□□ -0.53
HDAC4-208ENST00000463007 LCN1P1Q5VSP4 162 aa11.76□□□□□ -0.53
HDAC4-208ENST00000463007 OR8H3Q8N146 312 aa11.76□□□□□ -0.53
HDAC4-208ENST00000463007 TRAM1L1Q8N609 369 aa11.76□□□□□ -0.53
HDAC4-208ENST00000463007 OR4F15Q8NGB8 312 aa11.76□□□□□ -0.53
HDAC4-208ENST00000463007 TM9SF4Q92544 642 aa11.76□□□□□ -0.53
HDAC4-208ENST00000463007 ZSWIM3Q96MP5 696 aa11.76□□□□□ -0.53
HDAC4-208ENST00000463007 EQTNQ9NQ60 294 aa11.76□□□□□ -0.53
HDAC4-208ENST00000463007 PLEKHB1Q9UF11 243 aaPredicted RBP11.76□□□□□ -0.53
HDAC4-208ENST00000463007 BTNL2Q9UIR0 455 aa11.76□□□□□ -0.53
HDAC4-208ENST00000463007 TP53BP1Q12888 1972 aaPredicted RBP11.76□□□□□ -0.53
HDAC4-208ENST00000463007 FEZF1A0PJY2 475 aa11.76□□□□□ -0.53
HDAC4-208ENST00000463007 LEFTY1O75610 366 aa11.76□□□□□ -0.53
HDAC4-208ENST00000463007 TOXO94900 526 aa11.76□□□□□ -0.53
HDAC4-208ENST00000463007 IFNA14P01570 189 aa11.76□□□□□ -0.53
HDAC4-208ENST00000463007 H1F0P07305 194 aaKnown RBP11.76□□□□□ -0.53
HDAC4-208ENST00000463007 CISD3P0C7P0 127 aa11.76□□□□□ -0.53
HDAC4-208ENST00000463007 PCSK2P16519 638 aa11.76□□□□□ -0.53
HDAC4-208ENST00000463007 HOXB6P17509 224 aaKnown RBP11.76□□□□□ -0.53
HDAC4-208ENST00000463007 ETV6P41212 452 aa11.76□□□□□ -0.53
HDAC4-208ENST00000463007 MAP2K3P46734 347 aa11.76□□□□□ -0.53
HDAC4-208ENST00000463007 SLC16A1P53985 500 aa11.76□□□□□ -0.53
HDAC4-208ENST00000463007 ZNF33BQ06732 778 aa11.76□□□□□ -0.53
HDAC4-208ENST00000463007 REEP3Q6NUK4 255 aa11.76□□□□□ -0.53
HDAC4-208ENST00000463007 TCTN3Q6NUS6 607 aa11.76□□□□□ -0.53
HDAC4-208ENST00000463007 DPPA4Q7L190 304 aa11.76□□□□□ -0.53
HDAC4-208ENST00000463007 SLC37A3Q8NCC5 494 aa11.76□□□□□ -0.53
HDAC4-208ENST00000463007 GRPEL2Q8TAA5 225 aa11.76□□□□□ -0.53
HDAC4-208ENST00000463007 HCAR2Q8TDS4 363 aa11.76□□□□□ -0.53
HDAC4-208ENST00000463007 ZNF480Q8WV37 535 aa11.76□□□□□ -0.53
HDAC4-208ENST00000463007 ZBED6CLQ96FA7 236 aaPredicted RBP11.76□□□□□ -0.53
HDAC4-208ENST00000463007 KATNB1Q9BVA0 655 aa11.76□□□□□ -0.53
HDAC4-208ENST00000463007 TAPBPLQ9BX59 468 aa11.76□□□□□ -0.53
HDAC4-208ENST00000463007 C3orf14Q9HBI5 128 aa11.76□□□□□ -0.53
HDAC4-208ENST00000463007 ZDHHC4Q9NPG8 344 aa11.76□□□□□ -0.53
HDAC4-208ENST00000463007 RPL36Q9Y3U8 105 aaKnown RBP11.76□□□□□ -0.53
HDAC4-208ENST00000463007 TCF20Q9UGU0 1960 aaKnown RBP11.76□□□□□ -0.53
HDAC4-208ENST00000463007 PPM1DO15297 605 aa11.75□□□□□ -0.53
HDAC4-208ENST00000463007 FGF19O95750 216 aa11.75□□□□□ -0.53
HDAC4-208ENST00000463007 SOD1P00441 154 aa11.75□□□□□ -0.53
HDAC4-208ENST00000463007 EPHX1P07099 455 aa11.75□□□□□ -0.53
HDAC4-208ENST00000463007 RHOP08100 348 aa11.75□□□□□ -0.53
HDAC4-208ENST00000463007 OR12D1P0DN82 309 aa11.75□□□□□ -0.53
HDAC4-208ENST00000463007 OSMP13725 252 aa11.75□□□□□ -0.53
HDAC4-208ENST00000463007 DDX5P17844 614 aaKnown RBP11.75□□□□□ -0.53
HDAC4-208ENST00000463007 ELAVL4P26378 380 aaKnown RBP11.75□□□□□ -0.53
HDAC4-208ENST00000463007 MMP12P39900 470 aa11.75□□□□□ -0.53
HDAC4-208ENST00000463007 RECQLP46063 649 aaPredicted RBP11.75□□□□□ -0.53
HDAC4-208ENST00000463007 POLR2LP62875 67 aaKnown RBP11.75□□□□□ -0.53
HDAC4-208ENST00000463007 KCNC3Q14003 757 aa11.75□□□□□ -0.53
HDAC4-208ENST00000463007 WDR45BQ5MNZ6 344 aa11.75□□□□□ -0.53
HDAC4-208ENST00000463007 LY6G5CQ5SRR4 150 aa11.75□□□□□ -0.53
HDAC4-208ENST00000463007 SLC35F1Q5T1Q4 408 aa11.75□□□□□ -0.53
HDAC4-208ENST00000463007 FAM20CQ8IXL6 584 aa11.75□□□□□ -0.53
HDAC4-208ENST00000463007 PGBD3Q8N328 593 aa11.75□□□□□ -0.53
HDAC4-208ENST00000463007 BEST4Q8NFU0 473 aa11.75□□□□□ -0.53
HDAC4-208ENST00000463007 DOK4Q8TEW6 326 aa11.75□□□□□ -0.53
HDAC4-208ENST00000463007 FOPNLQ96NB1 174 aa11.75□□□□□ -0.53
HDAC4-208ENST00000463007 LRRC3BQ96PB8 259 aa11.75□□□□□ -0.53
HDAC4-208ENST00000463007 F2RL3Q96RI0 385 aa11.75□□□□□ -0.53
HDAC4-208ENST00000463007 B3GAT2Q9NPZ5 323 aa11.75□□□□□ -0.53
HDAC4-208ENST00000463007 CLCA2Q9UQC9 943 aa11.75□□□□□ -0.53
HDAC4-208ENST00000463007 A0A075B6Q4 140 aa11.75□□□□□ -0.53
HDAC4-208ENST00000463007 A0A1W2PPK0 400 aa11.75□□□□□ -0.53
HDAC4-208ENST00000463007 A8MUA0 341 aa11.75□□□□□ -0.53
HDAC4-208ENST00000463007 RNASET2O00584 256 aaKnown RBP11.75□□□□□ -0.53
HDAC4-208ENST00000463007 SCAMP1O15126 338 aa11.75□□□□□ -0.53
HDAC4-208ENST00000463007 NOS1APO75052 506 aaPredicted RBP11.75□□□□□ -0.53
HDAC4-208ENST00000463007 ZNF780AO75290 641 aaPredicted RBP11.75□□□□□ -0.53
HDAC4-208ENST00000463007 FURINP09958 794 aa11.75□□□□□ -0.53
HDAC4-208ENST00000463007 NR2F6P10588 404 aa11.75□□□□□ -0.53
HDAC4-208ENST00000463007 CYP2A6P11509 494 aaPredicted RBP11.75□□□□□ -0.53
HDAC4-208ENST00000463007 POU3F3P20264 500 aaPredicted RBP11.75□□□□□ -0.53
HDAC4-208ENST00000463007 SSTR2P30874 369 aa11.75□□□□□ -0.53
HDAC4-208ENST00000463007 DGKGP49619 791 aa11.75□□□□□ -0.53
HDAC4-208ENST00000463007 FABP5Q01469 135 aa11.75□□□□□ -0.53
HDAC4-208ENST00000463007 FCHO2Q0JRZ9 810 aa11.75□□□□□ -0.53
HDAC4-208ENST00000463007 CAMK1Q14012 370 aa11.75□□□□□ -0.53
HDAC4-208ENST00000463007 YIF1BQ5BJH7 314 aa11.75□□□□□ -0.53
HDAC4-208ENST00000463007 IDNKQ5T6J7 187 aa11.75□□□□□ -0.53
HDAC4-208ENST00000463007 LAS2Q8IYD9 372 aa11.75□□□□□ -0.53
HDAC4-208ENST00000463007 OXR1Q8N573 874 aa11.75□□□□□ -0.53
HDAC4-208ENST00000463007 RASGEF1AQ8N9B8 481 aa11.75□□□□□ -0.53
HDAC4-208ENST00000463007 GPR32P1Q8NGA4 272 aa11.75□□□□□ -0.53
HDAC4-208ENST00000463007 OR52I1Q8NGK6 324 aa11.75□□□□□ -0.53
HDAC4-208ENST00000463007 CHTF18Q8WVB6 975 aa11.75□□□□□ -0.53
HDAC4-208ENST00000463007 SLC25A46Q96AG3 418 aa11.75□□□□□ -0.53
HDAC4-208ENST00000463007 PLA2G12AQ9BZM1 189 aa11.75□□□□□ -0.53
HDAC4-208ENST00000463007 SLC23A1Q9UHI7 598 aa11.75□□□□□ -0.53
HDAC4-208ENST00000463007 SLC9A8Q9Y2E8 581 aa11.75□□□□□ -0.53
HDAC4-208ENST00000463007 SPEF1Q9Y4P9 236 aa11.75□□□□□ -0.53
HDAC4-208ENST00000463007 SLC5A10A0PJK1 596 aa11.75□□□□□ -0.53
HDAC4-208ENST00000463007 HYKKA2RU49 373 aa11.75□□□□□ -0.53
HDAC4-208ENST00000463007 FAM183AA6NL82 134 aa11.75□□□□□ -0.53
HDAC4-208ENST00000463007 POLR1CO15160 346 aaPredicted RBP11.75□□□□□ -0.53
HDAC4-208ENST00000463007 PRMT3O60678 531 aa11.75□□□□□ -0.53
HDAC4-208ENST00000463007 ERAL1O75616 437 aaKnown RBP11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms