RNA–Protein interactions for RNA: ENST00000462899.1

SMC3-202, Transcript of structural maintenance of chromosomes 3, humanhuman

TSL 5

Gene SMC3, Length 777 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3-202ENST00000462899 FAM167BQ9BTA0 163 aa6.97□□□□□ -1.29
SMC3-202ENST00000462899 MED18Q9BUE0 208 aa6.97□□□□□ -1.29
SMC3-202ENST00000462899 C19orf24Q9BVV8 132 aa6.97□□□□□ -1.29
SMC3-202ENST00000462899 ERVK-6Q9BXR3 956 aa6.97□□□□□ -1.29
SMC3-202ENST00000462899 MS4A8Q9BY19 250 aa6.97□□□□□ -1.29
SMC3-202ENST00000462899 EHD1Q9H4M9 534 aa6.97□□□□□ -1.29
SMC3-202ENST00000462899 IARS2Q9NSE4 1012 aaKnown RBP6.97□□□□□ -1.29
SMC3-202ENST00000462899 C20orf96Q9NUD7 363 aaPredicted RBP6.97□□□□□ -1.29
SMC3-202ENST00000462899 TMEM160Q9NX00 188 aa6.97□□□□□ -1.29
SMC3-202ENST00000462899 TEX10Q9NXF1 929 aaPredicted RBP6.97□□□□□ -1.29
SMC3-202ENST00000462899 HEY2Q9UBP5 337 aa6.97□□□□□ -1.29
SMC3-202ENST00000462899 RNF112Q9ULX5 631 aa6.97□□□□□ -1.29
SMC3-202ENST00000462899 ERVK-19Q9WJR5 959 aa6.97□□□□□ -1.29
SMC3-202ENST00000462899 ZKSCAN5Q9Y2L8 839 aa6.97□□□□□ -1.29
SMC3-202ENST00000462899 MAD1L1Q9Y6D9 718 aa6.97□□□□□ -1.29
SMC3-202ENST00000462899 SDR42E2A6NKP2 422 aa6.96□□□□□ -1.3
SMC3-202ENST00000462899 A8MV72 311 aaPredicted RBP6.96□□□□□ -1.3
SMC3-202ENST00000462899 H0Y3Z8 333 aa6.96□□□□□ -1.3
SMC3-202ENST00000462899 FAM229AH3BQW9 127 aa6.96□□□□□ -1.3
SMC3-202ENST00000462899 CDC7O00311 574 aa6.96□□□□□ -1.3
SMC3-202ENST00000462899 RTCAO00442 366 aaKnown RBP6.96□□□□□ -1.3
SMC3-202ENST00000462899 PLOD2O00469 737 aa6.96□□□□□ -1.3
SMC3-202ENST00000462899 TP53I11O14683 189 aa6.96□□□□□ -1.3
SMC3-202ENST00000462899 GNB5O14775 395 aa6.96□□□□□ -1.3
SMC3-202ENST00000462899 HS3ST1O14792 307 aa6.96□□□□□ -1.3
SMC3-202ENST00000462899 SIX3O95343 332 aaPredicted RBP6.96□□□□□ -1.3
SMC3-202ENST00000462899 RHOXF2BP0C7M4 288 aa6.96□□□□□ -1.3
SMC3-202ENST00000462899 DANCRP0C864 163 aa6.96□□□□□ -1.3
SMC3-202ENST00000462899 CD8BP10966 210 aa6.96□□□□□ -1.3
SMC3-202ENST00000462899 ZNF37AP17032 561 aaPredicted RBP6.96□□□□□ -1.3
SMC3-202ENST00000462899 EPORP19235 508 aa6.96□□□□□ -1.3
SMC3-202ENST00000462899 HIST1H1TP22492 207 aaPredicted RBP6.96□□□□□ -1.3
SMC3-202ENST00000462899 HPDP32754 393 aaPredicted RBP6.96□□□□□ -1.3
SMC3-202ENST00000462899 GALNSP34059 522 aa6.96□□□□□ -1.3
SMC3-202ENST00000462899 GDF5P43026 501 aa6.96□□□□□ -1.3
SMC3-202ENST00000462899 KCNJ1P48048 391 aa6.96□□□□□ -1.3
SMC3-202ENST00000462899 PLIN5Q00G26 463 aa6.96□□□□□ -1.3
SMC3-202ENST00000462899 BIKQ13323 160 aa6.96□□□□□ -1.3
SMC3-202ENST00000462899 VEZF1Q14119 521 aa6.96□□□□□ -1.3
SMC3-202ENST00000462899 BEX5Q5H9J7 111 aa6.96□□□□□ -1.3
SMC3-202ENST00000462899 RNF111Q6ZNA4 994 aa6.96□□□□□ -1.3
SMC3-202ENST00000462899 SLC29A4Q7RTT9 530 aa6.96□□□□□ -1.3
SMC3-202ENST00000462899 MILR1Q7Z6M3 343 aa6.96□□□□□ -1.3
SMC3-202ENST00000462899 TMEM139Q8IV31 216 aa6.96□□□□□ -1.3
SMC3-202ENST00000462899 WDSUB1Q8N9V3 476 aa6.96□□□□□ -1.3
SMC3-202ENST00000462899 C17orf47Q8NEP4 570 aa6.96□□□□□ -1.3
SMC3-202ENST00000462899 LILRB1Q8NHL6 650 aaPredicted RBP6.96□□□□□ -1.3
SMC3-202ENST00000462899 CCT6BQ92526 530 aa6.96□□□□□ -1.3
SMC3-202ENST00000462899 ANKRD7Q92527 254 aa6.96□□□□□ -1.3
SMC3-202ENST00000462899 HGDQ93099 445 aa6.96□□□□□ -1.3
SMC3-202ENST00000462899 RHBDF1Q96CC6 855 aa6.96□□□□□ -1.3
SMC3-202ENST00000462899 F2RL3Q96RI0 385 aa6.96□□□□□ -1.3
SMC3-202ENST00000462899 TMEM79Q9BSE2 394 aa6.96□□□□□ -1.3
SMC3-202ENST00000462899 TRIM54Q9BYV2 358 aa6.96□□□□□ -1.3
SMC3-202ENST00000462899 RBSNQ9H1K0 784 aa6.96□□□□□ -1.3
SMC3-202ENST00000462899 OPN3Q9H1Y3 402 aaPredicted RBP6.96□□□□□ -1.3
SMC3-202ENST00000462899 COPS7BQ9H9Q2 264 aaPredicted RBP6.96□□□□□ -1.3
SMC3-202ENST00000462899 PLAC1Q9HBJ0 212 aa6.96□□□□□ -1.3
SMC3-202ENST00000462899 YAE1D1Q9NRH1 226 aa6.96□□□□□ -1.3
SMC3-202ENST00000462899 SDAD1Q9NVU7 687 aaKnown RBP eCLIP6.96□□□□□ -1.3
SMC3-202ENST00000462899 ELOVL5Q9NYP7 299 aa6.96□□□□□ -1.3
SMC3-202ENST00000462899 GPRC5BQ9NZH0 403 aa6.96□□□□□ -1.3
SMC3-202ENST00000462899 DLGAP4Q9Y2H0 992 aa6.96□□□□□ -1.3
SMC3-202ENST00000462899 OARD1Q9Y530 152 aa6.96□□□□□ -1.3
SMC3-202ENST00000462899 ANKDD1BA6NHY2 528 aa6.95□□□□□ -1.3
SMC3-202ENST00000462899 C16orf97H3BN30 126 aa6.95□□□□□ -1.3
SMC3-202ENST00000462899 PRKRAO75569 313 aaKnown RBP6.95□□□□□ -1.3
SMC3-202ENST00000462899 WDR47O94967 919 aa6.95□□□□□ -1.3
SMC3-202ENST00000462899 ABCB1P08183 1280 aaPredicted RBP6.95□□□□□ -1.3
SMC3-202ENST00000462899 POU2F1P14859 743 aa6.95□□□□□ -1.3
SMC3-202ENST00000462899 ALOX15P16050 662 aaPredicted RBP6.95□□□□□ -1.3
SMC3-202ENST00000462899 GGT5P36269 586 aa6.95□□□□□ -1.3
SMC3-202ENST00000462899 MASP1P48740 699 aa6.95□□□□□ -1.3
SMC3-202ENST00000462899 HNMTP50135 292 aa6.95□□□□□ -1.3
SMC3-202ENST00000462899 HNRNPH2P55795 449 aaKnown RBP6.95□□□□□ -1.3
SMC3-202ENST00000462899 CLDN15P56746 228 aa6.95□□□□□ -1.3
SMC3-202ENST00000462899 SARNPP82979 210 aaKnown RBP6.95□□□□□ -1.3
SMC3-202ENST00000462899 TNFRSF17Q02223 184 aa6.95□□□□□ -1.3
SMC3-202ENST00000462899 KIF5AQ12840 1032 aa6.95□□□□□ -1.3
SMC3-202ENST00000462899 CRYMQ14894 314 aa6.95□□□□□ -1.3
SMC3-202ENST00000462899 C18orf63Q68DL7 685 aa6.95□□□□□ -1.3
SMC3-202ENST00000462899 ALKBH2Q6NS38 261 aa6.95□□□□□ -1.3
SMC3-202ENST00000462899 ADAM5Q6NVV9 412 aa6.95□□□□□ -1.3
SMC3-202ENST00000462899 SCIMPQ6UWF3 145 aa6.95□□□□□ -1.3
SMC3-202ENST00000462899 TRIM42Q8IWZ5 723 aa6.95□□□□□ -1.3
SMC3-202ENST00000462899 TAGAPQ8N103 731 aa6.95□□□□□ -1.3
SMC3-202ENST00000462899 KRT78Q8N1N4 520 aa6.95□□□□□ -1.3
SMC3-202ENST00000462899 ZNF615Q8N8J6 731 aa6.95□□□□□ -1.3
SMC3-202ENST00000462899 OR1J4Q8NGS1 313 aa6.95□□□□□ -1.3
SMC3-202ENST00000462899 DOK4Q8TEW6 326 aa6.95□□□□□ -1.3
SMC3-202ENST00000462899 ZNF473Q8WTR7 871 aaKnown RBP6.95□□□□□ -1.3
SMC3-202ENST00000462899 RNF138Q8WVD3 245 aa6.95□□□□□ -1.3
SMC3-202ENST00000462899 ROBO4Q8WZ75 1007 aa6.95□□□□□ -1.3
SMC3-202ENST00000462899 UCN3Q969E3 161 aa6.95□□□□□ -1.3
SMC3-202ENST00000462899 ZBED6CLQ96FA7 236 aaPredicted RBP6.95□□□□□ -1.3
SMC3-202ENST00000462899 PGM2Q96G03 612 aa6.95□□□□□ -1.3
SMC3-202ENST00000462899 TBCDQ9BTW9 1192 aa6.95□□□□□ -1.3
SMC3-202ENST00000462899 ZNF717Q9BY31 904 aaPredicted RBP6.95□□□□□ -1.3
SMC3-202ENST00000462899 ROGDIQ9GZN7 287 aa6.95□□□□□ -1.3
SMC3-202ENST00000462899 SLCO5A1Q9H2Y9 848 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms