RNA–Protein interactions for RNA: ENST00000462482.1

SKA3-204, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 750 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-204ENST00000462482 TACR1P25103 407 aa14.07□□□□□ -0.16
SKA3-204ENST00000462482 ABCD3P28288 659 aa14.07□□□□□ -0.16
SKA3-204ENST00000462482 WNT3P56703 355 aa14.07□□□□□ -0.16
SKA3-204ENST00000462482 GUCY2DQ02846 1103 aa14.07□□□□□ -0.16
SKA3-204ENST00000462482 DAZAP2Q15038 168 aaPredicted RBP14.07□□□□□ -0.16
SKA3-204ENST00000462482 SGO1Q5FBB7 561 aa14.07□□□□□ -0.16
SKA3-204ENST00000462482 NHSL2Q5HYW2 709 aa14.07□□□□□ -0.16
SKA3-204ENST00000462482 WIPI1Q5MNZ9 446 aaPredicted RBP14.07□□□□□ -0.16
SKA3-204ENST00000462482 SLC30A6Q6NXT4 461 aa14.07□□□□□ -0.16
SKA3-204ENST00000462482 SCIMPQ6UWF3 145 aa14.07□□□□□ -0.16
SKA3-204ENST00000462482 ANGPTL8Q6UXH0 198 aa14.07□□□□□ -0.16
SKA3-204ENST00000462482 NUP54Q7Z3B4 507 aa14.07□□□□□ -0.16
SKA3-204ENST00000462482 MILR1Q7Z6M3 343 aa14.07□□□□□ -0.16
SKA3-204ENST00000462482 NAXEQ8NCW5 288 aa14.07□□□□□ -0.16
SKA3-204ENST00000462482 OR52B6Q8NGF0 335 aa14.07□□□□□ -0.16
SKA3-204ENST00000462482 TRPC4APQ8TEL6 797 aa14.07□□□□□ -0.16
SKA3-204ENST00000462482 UCN3Q969E3 161 aa14.07□□□□□ -0.16
SKA3-204ENST00000462482 ADIPOR1Q96A54 375 aa14.07□□□□□ -0.16
SKA3-204ENST00000462482 NTMT1Q9BV86 223 aa14.07□□□□□ -0.16
SKA3-204ENST00000462482 FAIM2Q9BWQ8 316 aa14.07□□□□□ -0.16
SKA3-204ENST00000462482 UGT2B28Q9BY64 529 aa14.07□□□□□ -0.16
SKA3-204ENST00000462482 MRPL1Q9BYD6 325 aaKnown RBP14.07□□□□□ -0.16
SKA3-204ENST00000462482 EPB41L4BQ9H329 900 aa14.07□□□□□ -0.16
SKA3-204ENST00000462482 UBQLN3Q9H347 655 aa14.07□□□□□ -0.16
SKA3-204ENST00000462482 CALHM2Q9HA72 323 aa14.07□□□□□ -0.16
SKA3-204ENST00000462482 KLRF1Q9NZS2 232 aa14.07□□□□□ -0.16
SKA3-204ENST00000462482 SLC12A4Q9UP95 1085 aa14.07□□□□□ -0.16
SKA3-204ENST00000462482 PLEKHA6Q9Y2H5 1048 aa14.07□□□□□ -0.16
SKA3-204ENST00000462482 CELSR1Q9NYQ6 3014 aa14.06□□□□□ -0.16
SKA3-204ENST00000462482 STX16-NPEPL1H3BU86 382 aa14.06□□□□□ -0.16
SKA3-204ENST00000462482 OR7A17O14581 309 aa14.06□□□□□ -0.16
SKA3-204ENST00000462482 STX16O14662 325 aa14.06□□□□□ -0.16
SKA3-204ENST00000462482 ACOX3O15254 700 aa14.06□□□□□ -0.16
SKA3-204ENST00000462482 GOSR1O95249 250 aa14.06□□□□□ -0.16
SKA3-204ENST00000462482 INHBAP08476 426 aa14.06□□□□□ -0.16
SKA3-204ENST00000462482 CT62P0C5K7 136 aa14.06□□□□□ -0.16
SKA3-204ENST00000462482 EPXP11678 715 aa14.06□□□□□ -0.16
SKA3-204ENST00000462482 GPX3P22352 226 aa14.06□□□□□ -0.16
SKA3-204ENST00000462482 DCAF7P61962 342 aa14.06□□□□□ -0.16
SKA3-204ENST00000462482 PLCXD2Q0VAA5 305 aa14.06□□□□□ -0.16
SKA3-204ENST00000462482 KEAP1Q14145 624 aa14.06□□□□□ -0.16
SKA3-204ENST00000462482 TSNAXIP1Q2TAA8 658 aa14.06□□□□□ -0.16
SKA3-204ENST00000462482 EIPR1Q53HC9 387 aa14.06□□□□□ -0.16
SKA3-204ENST00000462482 TECRLQ5HYJ1 363 aa14.06□□□□□ -0.16
SKA3-204ENST00000462482 ENPP6Q6UWR7 440 aa14.06□□□□□ -0.16
SKA3-204ENST00000462482 LCORQ96JN0 433 aaPredicted RBP14.06□□□□□ -0.16
SKA3-204ENST00000462482 ALPK1Q96QP1 1244 aa14.06□□□□□ -0.16
SKA3-204ENST00000462482 YIPF4Q9BSR8 244 aa14.06□□□□□ -0.16
SKA3-204ENST00000462482 OSBPL11Q9BXB4 747 aa14.06□□□□□ -0.16
SKA3-204ENST00000462482 NXF5Q9H1B4 397 aaKnown RBP14.06□□□□□ -0.16
SKA3-204ENST00000462482 LIME1Q9H400 295 aa14.06□□□□□ -0.16
SKA3-204ENST00000462482 PFDN4Q9NQP4 134 aa14.06□□□□□ -0.16
SKA3-204ENST00000462482 PRODH2Q9UF12 536 aa14.06□□□□□ -0.16
SKA3-204ENST00000462482 CBLCQ9ULV8 474 aa14.06□□□□□ -0.16
SKA3-204ENST00000462482 SNX6Q9UNH7 406 aa14.06□□□□□ -0.16
SKA3-204ENST00000462482 PCDHA9Q9Y5H5 950 aa14.06□□□□□ -0.16
SKA3-204ENST00000462482 ZNF780BQ9Y6R6 833 aa14.06□□□□□ -0.16
SKA3-204ENST00000462482 AKAP9Q99996 3911 aa14.06□□□□□ -0.16
SKA3-204ENST00000462482 A0A1W2PS29 197 aa14.05□□□□□ -0.16
SKA3-204ENST00000462482 MBD3L4A6NDZ8 208 aaPredicted RBP14.05□□□□□ -0.16
SKA3-204ENST00000462482 MBD3L3A6NE82 208 aaPredicted RBP14.05□□□□□ -0.16
SKA3-204ENST00000462482 MBD3L5A6NJ08 208 aaPredicted RBP14.05□□□□□ -0.16
SKA3-204ENST00000462482 H0Y3Z8 333 aa14.05□□□□□ -0.16
SKA3-204ENST00000462482 IL18BPO95998 194 aa14.05□□□□□ -0.16
SKA3-204ENST00000462482 OTCP00480 354 aa14.05□□□□□ -0.16
SKA3-204ENST00000462482 RAF1P04049 648 aa14.05□□□□□ -0.16
SKA3-204ENST00000462482 ALDOAP04075 364 aaKnown RBP14.05□□□□□ -0.16
SKA3-204ENST00000462482 ABCB1P08183 1280 aaPredicted RBP14.05□□□□□ -0.16
SKA3-204ENST00000462482 RHOXF2BP0C7M4 288 aa14.05□□□□□ -0.16
SKA3-204ENST00000462482 PTPN6P29350 595 aa14.05□□□□□ -0.16
SKA3-204ENST00000462482 FEN1P39748 380 aaKnown RBP14.05□□□□□ -0.16
SKA3-204ENST00000462482 CPA2P48052 419 aa14.05□□□□□ -0.16
SKA3-204ENST00000462482 ZNF136P52737 540 aa14.05□□□□□ -0.16
SKA3-204ENST00000462482 SORDQ00796 357 aa14.05□□□□□ -0.16
SKA3-204ENST00000462482 CKAP4Q07065 602 aaKnown RBP14.05□□□□□ -0.16
SKA3-204ENST00000462482 MAP4K2Q12851 820 aa14.05□□□□□ -0.16
SKA3-204ENST00000462482 SNTA1Q13424 505 aa14.05□□□□□ -0.16
SKA3-204ENST00000462482 NNATQ16517 81 aa14.05□□□□□ -0.16
SKA3-204ENST00000462482 C8orf74Q6P047 294 aa14.05□□□□□ -0.16
SKA3-204ENST00000462482 SLC48A1Q6P1K1 146 aa14.05□□□□□ -0.16
SKA3-204ENST00000462482 COMMD6Q7Z4G1 85 aa14.05□□□□□ -0.16
SKA3-204ENST00000462482 YRDCQ86U90 279 aaKnown RBP14.05□□□□□ -0.16
SKA3-204ENST00000462482 METTL4Q8N3J2 472 aa14.05□□□□□ -0.16
SKA3-204ENST00000462482 FAM83FQ8NEG4 500 aaPredicted RBP14.05□□□□□ -0.16
SKA3-204ENST00000462482 OR14L1PQ8NHC6 308 aa14.05□□□□□ -0.16
SKA3-204ENST00000462482 MBD3L2Q8NHZ7 208 aaPredicted RBP14.05□□□□□ -0.16
SKA3-204ENST00000462482 ZPLD1Q8TCW7 415 aa14.05□□□□□ -0.16
SKA3-204ENST00000462482 SELENOMQ8WWX9 145 aa14.05□□□□□ -0.16
SKA3-204ENST00000462482 KLHL29Q96CT2 875 aa14.05□□□□□ -0.16
SKA3-204ENST00000462482 TMCO6Q96DC7 493 aa14.05□□□□□ -0.16
SKA3-204ENST00000462482 OMA1Q96E52 524 aa14.05□□□□□ -0.16
SKA3-204ENST00000462482 WDYHV1Q96HA8 205 aa14.05□□□□□ -0.16
SKA3-204ENST00000462482 ZFP3Q96NJ6 502 aa14.05□□□□□ -0.16
SKA3-204ENST00000462482 GPR78Q96P69 363 aa14.05□□□□□ -0.16
SKA3-204ENST00000462482 TM9SF2Q99805 663 aa14.05□□□□□ -0.16
SKA3-204ENST00000462482 TSPYL1Q9H0U9 437 aa14.05□□□□□ -0.16
SKA3-204ENST00000462482 ACBD3Q9H3P7 528 aa14.05□□□□□ -0.16
SKA3-204ENST00000462482 ACSS3Q9H6R3 686 aa14.05□□□□□ -0.16
SKA3-204ENST00000462482 FETUBQ9UGM5 382 aa14.05□□□□□ -0.16
SKA3-204ENST00000462482 PCTPQ9UKL6 214 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 139.8 ms