RNA–Protein interactions for RNA: ENST00000461239.2

ECHDC1-212, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 617 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-212ENST00000461239 VSX2P58304 361 aaPredicted RBP7.56□□□□□ -1.2
ECHDC1-212ENST00000461239 RELAQ04206 551 aa7.56□□□□□ -1.2
ECHDC1-212ENST00000461239 HKDC1Q2TB90 917 aa7.56□□□□□ -1.2
ECHDC1-212ENST00000461239 TAF1BQ53T94 588 aaPredicted RBP7.56□□□□□ -1.2
ECHDC1-212ENST00000461239 WASHC2DQ5SRD0 308 aa7.56□□□□□ -1.2
ECHDC1-212ENST00000461239 BEND6Q5SZJ8 279 aaPredicted RBP7.56□□□□□ -1.2
ECHDC1-212ENST00000461239 FAM69BQ5VUD6 431 aa7.56□□□□□ -1.2
ECHDC1-212ENST00000461239 FRA10AC1Q70Z53 315 aa7.56□□□□□ -1.2
ECHDC1-212ENST00000461239 RPS27LQ71UM5 84 aaKnown RBP7.56□□□□□ -1.2
ECHDC1-212ENST00000461239 VASH2Q86V25 355 aa7.56□□□□□ -1.2
ECHDC1-212ENST00000461239 C17orf64Q86WR6 236 aa7.56□□□□□ -1.2
ECHDC1-212ENST00000461239 DSELQ8IZU8 1212 aa7.56□□□□□ -1.2
ECHDC1-212ENST00000461239 OR8K5Q8NH50 307 aa7.56□□□□□ -1.2
ECHDC1-212ENST00000461239 CEP70Q8NHQ1 597 aa7.56□□□□□ -1.2
ECHDC1-212ENST00000461239 UBTD2Q8WUN7 234 aa7.56□□□□□ -1.2
ECHDC1-212ENST00000461239 KCNE4Q8WWG9 221 aa7.56□□□□□ -1.2
ECHDC1-212ENST00000461239 HTRA1Q92743 480 aa7.56□□□□□ -1.2
ECHDC1-212ENST00000461239 EXTL1Q92935 676 aa7.56□□□□□ -1.2
ECHDC1-212ENST00000461239 FKBP10Q96AY3 582 aa7.56□□□□□ -1.2
ECHDC1-212ENST00000461239 ZBTB9Q96C00 473 aa7.56□□□□□ -1.2
ECHDC1-212ENST00000461239 CTHRC1Q96CG8 243 aa7.56□□□□□ -1.2
ECHDC1-212ENST00000461239 R3HDM4Q96D70 268 aa7.56□□□□□ -1.2
ECHDC1-212ENST00000461239 TM4SF19Q96DZ7 209 aa7.56□□□□□ -1.2
ECHDC1-212ENST00000461239 MOCOSQ96EN8 888 aa7.56□□□□□ -1.2
ECHDC1-212ENST00000461239 C10orf90Q96M02 699 aa7.56□□□□□ -1.2
ECHDC1-212ENST00000461239 GBP5Q96PP8 586 aa7.56□□□□□ -1.2
ECHDC1-212ENST00000461239 EGFL8Q99944 293 aa7.56□□□□□ -1.2
ECHDC1-212ENST00000461239 MACROD1Q9BQ69 325 aa7.56□□□□□ -1.2
ECHDC1-212ENST00000461239 CCDC77Q9BR77 488 aa7.56□□□□□ -1.2
ECHDC1-212ENST00000461239 TMEM109Q9BVC6 243 aa7.56□□□□□ -1.2
ECHDC1-212ENST00000461239 AICDAQ9GZX7 198 aa7.56□□□□□ -1.2
ECHDC1-212ENST00000461239 PCBD2Q9H0N5 130 aa7.56□□□□□ -1.2
ECHDC1-212ENST00000461239 LHX9Q9NQ69 397 aa7.56□□□□□ -1.2
ECHDC1-212ENST00000461239 NUDT4Q9NZJ9 180 aa7.56□□□□□ -1.2
ECHDC1-212ENST00000461239 CD274Q9NZQ7 290 aa7.56□□□□□ -1.2
ECHDC1-212ENST00000461239 CPSF2Q9P2I0 782 aaKnown RBP7.56□□□□□ -1.2
ECHDC1-212ENST00000461239 DHCR7Q9UBM7 475 aaKnown RBP7.56□□□□□ -1.2
ECHDC1-212ENST00000461239 NKX1-2Q9UD57 310 aaPredicted RBP7.56□□□□□ -1.2
ECHDC1-212ENST00000461239 IL17BQ9UHF5 180 aa7.56□□□□□ -1.2
ECHDC1-212ENST00000461239 LGALS13Q9UHV8 139 aa7.56□□□□□ -1.2
ECHDC1-212ENST00000461239 SNX7Q9UNH6 387 aa7.56□□□□□ -1.2
ECHDC1-212ENST00000461239 MRPS2Q9Y399 296 aaKnown RBP7.56□□□□□ -1.2
ECHDC1-212ENST00000461239 MRPS18BQ9Y676 258 aaKnown RBP7.56□□□□□ -1.2
ECHDC1-212ENST00000461239 BSNQ9UPA5 3926 aa7.56□□□□□ -1.2
ECHDC1-212ENST00000461239 ZFYVE26Q68DK2 2539 aa7.55□□□□□ -1.2
ECHDC1-212ENST00000461239 MDC1Q14676 2089 aaKnown RBP7.55□□□□□ -1.2
ECHDC1-212ENST00000461239 KCNE1BA0A087WTH5 132 aa7.55□□□□□ -1.2
ECHDC1-212ENST00000461239 A8MVJ9 347 aa7.55□□□□□ -1.2
ECHDC1-212ENST00000461239 SUPT3HB4E1H0 165 aa7.55□□□□□ -1.2
ECHDC1-212ENST00000461239 KLK10O43240 276 aa7.55□□□□□ -1.2
ECHDC1-212ENST00000461239 SRPX2O60687 465 aaPredicted RBP7.55□□□□□ -1.2
ECHDC1-212ENST00000461239 CNOT3O75175 753 aaKnown RBP7.55□□□□□ -1.2
ECHDC1-212ENST00000461239 CDH16O75309 829 aa7.55□□□□□ -1.2
ECHDC1-212ENST00000461239 SUPT3HO75486 399 aa7.55□□□□□ -1.2
ECHDC1-212ENST00000461239 STK16O75716 305 aa7.55□□□□□ -1.2
ECHDC1-212ENST00000461239 OR2B3O76000 313 aa7.55□□□□□ -1.2
ECHDC1-212ENST00000461239 CCNDBP1O95273 360 aa7.55□□□□□ -1.2
ECHDC1-212ENST00000461239 FESP07332 822 aa7.55□□□□□ -1.2
ECHDC1-212ENST00000461239 LIFP15018 202 aa7.55□□□□□ -1.2
ECHDC1-212ENST00000461239 EZRP15311 586 aaKnown RBP7.55□□□□□ -1.2
ECHDC1-212ENST00000461239 REEP5Q00765 189 aa7.55□□□□□ -1.2
ECHDC1-212ENST00000461239 SLC18A2Q05940 514 aa7.55□□□□□ -1.2
ECHDC1-212ENST00000461239 CDC16Q13042 620 aa7.55□□□□□ -1.2
ECHDC1-212ENST00000461239 TBCCQ15814 346 aa7.55□□□□□ -1.2
ECHDC1-212ENST00000461239 TNFAIP8L3Q5GJ75 292 aa7.55□□□□□ -1.2
ECHDC1-212ENST00000461239 LGSNQ5TDP6 509 aa7.55□□□□□ -1.2
ECHDC1-212ENST00000461239 DGAT2L7PQ6IED9 249 aa7.55□□□□□ -1.2
ECHDC1-212ENST00000461239 ADNP2Q6IQ32 1131 aa7.55□□□□□ -1.2
ECHDC1-212ENST00000461239 RHBDD2Q6NTF9 364 aa7.55□□□□□ -1.2
ECHDC1-212ENST00000461239 CCDC144NLQ6NUI1 221 aa7.55□□□□□ -1.2
ECHDC1-212ENST00000461239 FAM198BQ6UWH4 519 aa7.55□□□□□ -1.2
ECHDC1-212ENST00000461239 COX15Q7KZN9 410 aa7.55□□□□□ -1.2
ECHDC1-212ENST00000461239 TAOK1Q7L7X3 1001 aa7.55□□□□□ -1.2
ECHDC1-212ENST00000461239 TMEM126BQ8IUX1 230 aa7.55□□□□□ -1.2
ECHDC1-212ENST00000461239 TCAIMQ8N3R3 496 aa7.55□□□□□ -1.2
ECHDC1-212ENST00000461239 ACMSDQ8TDX5 336 aa7.55□□□□□ -1.2
ECHDC1-212ENST00000461239 ZDHHC19Q8WVZ1 309 aaPredicted RBP7.55□□□□□ -1.2
ECHDC1-212ENST00000461239 SLC5A11Q8WWX8 675 aa7.55□□□□□ -1.2
ECHDC1-212ENST00000461239 ASB10Q8WXI3 467 aa7.55□□□□□ -1.2
ECHDC1-212ENST00000461239 PHF21BQ96EK2 531 aa7.55□□□□□ -1.2
ECHDC1-212ENST00000461239 CABS1Q96KC9 395 aa7.55□□□□□ -1.2
ECHDC1-212ENST00000461239 C8orf49Q96NF6 230 aa7.55□□□□□ -1.2
ECHDC1-212ENST00000461239 LRFN5Q96NI6 719 aa7.55□□□□□ -1.2
ECHDC1-212ENST00000461239 ZIM3Q96PE6 472 aa7.55□□□□□ -1.2
ECHDC1-212ENST00000461239 MRPL57Q9BQC6 102 aaKnown RBP7.55□□□□□ -1.2
ECHDC1-212ENST00000461239 SELENOSQ9BQE4 189 aa7.55□□□□□ -1.2
ECHDC1-212ENST00000461239 HAUS8Q9BT25 410 aa7.55□□□□□ -1.2
ECHDC1-212ENST00000461239 ACTR5Q9H9F9 607 aaPredicted RBP7.55□□□□□ -1.2
ECHDC1-212ENST00000461239 CHODLQ9H9P2 273 aa7.55□□□□□ -1.2
ECHDC1-212ENST00000461239 KCNK9Q9NPC2 374 aa7.55□□□□□ -1.2
ECHDC1-212ENST00000461239 DNAJC11Q9NVH1 559 aa7.55□□□□□ -1.2
ECHDC1-212ENST00000461239 TBCCD1Q9NVR7 557 aa7.55□□□□□ -1.2
ECHDC1-212ENST00000461239 WWOXQ9NZC7 414 aa7.55□□□□□ -1.2
ECHDC1-212ENST00000461239 CNOT11Q9UKZ1 510 aaKnown RBP7.55□□□□□ -1.2
ECHDC1-212ENST00000461239 ZNF490Q9ULM2 529 aaPredicted RBP7.55□□□□□ -1.2
ECHDC1-212ENST00000461239 CHD6Q8TD26 2715 aa7.55□□□□□ -1.2
ECHDC1-212ENST00000461239 BOD1L1Q8NFC6 3051 aa7.55□□□□□ -1.2
ECHDC1-212ENST00000461239 CENPVL1A0A0U1RR11 272 aa7.54□□□□□ -1.2
ECHDC1-212ENST00000461239 A6NLC8 198 aa7.54□□□□□ -1.2
ECHDC1-212ENST00000461239 SYCE1LA8MT33 242 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms