RNA–Protein interactions for RNA: ENST00000460826.1

HDLBP-229, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 442 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-229ENST00000460826 CLMPQ9H6B4 373 aa12.97□□□□□ -0.33
HDLBP-229ENST00000460826 ACSS1Q9NUB1 689 aaPredicted RBP12.97□□□□□ -0.33
HDLBP-229ENST00000460826 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.97□□□□□ -0.33
HDLBP-229ENST00000460826 ANKRD10Q9NXR5 420 aa12.97□□□□□ -0.33
HDLBP-229ENST00000460826 MYOTQ9UBF9 498 aa12.97□□□□□ -0.33
HDLBP-229ENST00000460826 A0A0G2JND7 137 aa12.96□□□□□ -0.33
HDLBP-229ENST00000460826 A0A1W2PRB8 838 aa12.96□□□□□ -0.33
HDLBP-229ENST00000460826 OR6C76A6NM76 312 aa12.96□□□□□ -0.33
HDLBP-229ENST00000460826 UPK1AO00322 258 aa12.96□□□□□ -0.33
HDLBP-229ENST00000460826 PLOD2O00469 737 aa12.96□□□□□ -0.33
HDLBP-229ENST00000460826 SCN2BO60939 215 aa12.96□□□□□ -0.33
HDLBP-229ENST00000460826 C1QL1O75973 258 aa12.96□□□□□ -0.33
HDLBP-229ENST00000460826 OR2J2O76002 312 aa12.96□□□□□ -0.33
HDLBP-229ENST00000460826 NADKO95544 446 aaPredicted RBP12.96□□□□□ -0.33
HDLBP-229ENST00000460826 C6orf47O95873 294 aa12.96□□□□□ -0.33
HDLBP-229ENST00000460826 CD96P40200 585 aa12.96□□□□□ -0.33
HDLBP-229ENST00000460826 DGKQP52824 942 aa12.96□□□□□ -0.33
HDLBP-229ENST00000460826 CLNS1AP54105 237 aaKnown RBP12.96□□□□□ -0.33
HDLBP-229ENST00000460826 MANFP55145 182 aaKnown RBP12.96□□□□□ -0.33
HDLBP-229ENST00000460826 ARG2P78540 354 aa12.96□□□□□ -0.33
HDLBP-229ENST00000460826 TUBA3CQ13748 450 aa12.96□□□□□ -0.33
HDLBP-229ENST00000460826 GSTA3Q16772 222 aa12.96□□□□□ -0.33
HDLBP-229ENST00000460826 TUBA3EQ6PEY2 450 aa12.96□□□□□ -0.33
HDLBP-229ENST00000460826 SLC29A4Q7RTT9 530 aa12.96□□□□□ -0.33
HDLBP-229ENST00000460826 OR5L2Q8NGL0 311 aa12.96□□□□□ -0.33
HDLBP-229ENST00000460826 OR9I1Q8NGQ6 314 aa12.96□□□□□ -0.33
HDLBP-229ENST00000460826 ZFP28Q8NHY6 868 aa12.96□□□□□ -0.33
HDLBP-229ENST00000460826 NUBPLQ8TB37 319 aa12.96□□□□□ -0.33
HDLBP-229ENST00000460826 STON2Q8WXE9 905 aa12.96□□□□□ -0.33
HDLBP-229ENST00000460826 TM9SF4Q92544 642 aa12.96□□□□□ -0.33
HDLBP-229ENST00000460826 HAS2Q92819 552 aa12.96□□□□□ -0.33
HDLBP-229ENST00000460826 ADIPOR1Q96A54 375 aa12.96□□□□□ -0.33
HDLBP-229ENST00000460826 TESCQ96BS2 214 aa12.96□□□□□ -0.33
HDLBP-229ENST00000460826 MAGED4Q96JG8 741 aa12.96□□□□□ -0.33
HDLBP-229ENST00000460826 RASL10BQ96S79 203 aa12.96□□□□□ -0.33
HDLBP-229ENST00000460826 PRPF18Q99633 342 aaKnown RBP12.96□□□□□ -0.33
HDLBP-229ENST00000460826 TMEM120AQ9BXJ8 343 aa12.96□□□□□ -0.33
HDLBP-229ENST00000460826 TRIM4Q9C037 500 aa12.96□□□□□ -0.33
HDLBP-229ENST00000460826 BHLHE41Q9C0J9 482 aaPredicted RBP12.96□□□□□ -0.33
HDLBP-229ENST00000460826 RNF32Q9H0A6 362 aa12.96□□□□□ -0.33
HDLBP-229ENST00000460826 SDR39U1Q9NRG7 319 aaPredicted RBP12.96□□□□□ -0.33
HDLBP-229ENST00000460826 SIRT3Q9NTG7 399 aaPredicted RBP12.96□□□□□ -0.33
HDLBP-229ENST00000460826 ATAD3AQ9NVI7 634 aa12.96□□□□□ -0.33
HDLBP-229ENST00000460826 FAM53CQ9NYF3 392 aa12.96□□□□□ -0.33
HDLBP-229ENST00000460826 LUZP4Q9P127 313 aa12.96□□□□□ -0.33
HDLBP-229ENST00000460826 C19orf53Q9UNZ5 99 aaPredicted RBP12.96□□□□□ -0.33
HDLBP-229ENST00000460826 MAPRE3Q9UPY8 281 aa12.96□□□□□ -0.33
HDLBP-229ENST00000460826 ERVK-11Q9UQG0 969 aa12.96□□□□□ -0.33
HDLBP-229ENST00000460826 YARS2Q9Y2Z4 477 aaKnown RBP12.96□□□□□ -0.33
HDLBP-229ENST00000460826 NINQ8N4C6 2090 aa12.96□□□□□ -0.33
HDLBP-229ENST00000460826 ZNF462Q96JM2 2506 aa12.96□□□□□ -0.34
HDLBP-229ENST00000460826 SVILO95425 2214 aa12.96□□□□□ -0.34
HDLBP-229ENST00000460826 A0A087WV62 115 aa12.95□□□□□ -0.34
HDLBP-229ENST00000460826 C2orf92A0A1B0GVN3 265 aa12.95□□□□□ -0.34
HDLBP-229ENST00000460826 DYTNA2CJ06 578 aa12.95□□□□□ -0.34
HDLBP-229ENST00000460826 OR5H15A6NDH6 313 aa12.95□□□□□ -0.34
HDLBP-229ENST00000460826 FCHO1O14526 889 aa12.95□□□□□ -0.34
HDLBP-229ENST00000460826 PRAMEF2O60811 474 aa12.95□□□□□ -0.34
HDLBP-229ENST00000460826 PSMG1O95456 288 aa12.95□□□□□ -0.34
HDLBP-229ENST00000460826 TRHRP34981 398 aaPredicted RBP12.95□□□□□ -0.34
HDLBP-229ENST00000460826 GPC1P35052 558 aa12.95□□□□□ -0.34
HDLBP-229ENST00000460826 SOX3P41225 446 aa12.95□□□□□ -0.34
HDLBP-229ENST00000460826 TNFSF10P50591 281 aa12.95□□□□□ -0.34
HDLBP-229ENST00000460826 SSR4P51571 173 aa12.95□□□□□ -0.34
HDLBP-229ENST00000460826 KLRB1Q12918 225 aa12.95□□□□□ -0.34
HDLBP-229ENST00000460826 RPS6KA2Q15349 733 aa12.95□□□□□ -0.34
HDLBP-229ENST00000460826 NNATQ16517 81 aa12.95□□□□□ -0.34
HDLBP-229ENST00000460826 FAM174BQ3ZCQ3 159 aa12.95□□□□□ -0.34
HDLBP-229ENST00000460826 PLEKHN1Q494U1 663 aaPredicted RBP12.95□□□□□ -0.34
HDLBP-229ENST00000460826 PIGGQ5H8A4 983 aa12.95□□□□□ -0.34
HDLBP-229ENST00000460826 SLC6A19Q695T7 634 aa12.95□□□□□ -0.34
HDLBP-229ENST00000460826 PAOXQ6QHF9 649 aa12.95□□□□□ -0.34
HDLBP-229ENST00000460826 Q6ZS92 163 aa12.95□□□□□ -0.34
HDLBP-229ENST00000460826 ZNF227Q86WZ6 799 aa12.95□□□□□ -0.34
HDLBP-229ENST00000460826 HPS6Q86YV9 775 aa12.95□□□□□ -0.34
HDLBP-229ENST00000460826 CLECL1Q8IZS7 167 aa12.95□□□□□ -0.34
HDLBP-229ENST00000460826 OR2L13Q8N349 312 aa12.95□□□□□ -0.34
HDLBP-229ENST00000460826 OR8J2Q8NGG1 315 aa12.95□□□□□ -0.34
HDLBP-229ENST00000460826 OR5P2Q8WZ92 322 aa12.95□□□□□ -0.34
HDLBP-229ENST00000460826 ERP27Q96DN0 273 aa12.95□□□□□ -0.34
HDLBP-229ENST00000460826 SIGLEC12Q96PQ1 595 aa12.95□□□□□ -0.34
HDLBP-229ENST00000460826 UTP23Q9BRU9 249 aaKnown RBP12.95□□□□□ -0.34
HDLBP-229ENST00000460826 SIKE1Q9BRV8 207 aa12.95□□□□□ -0.34
HDLBP-229ENST00000460826 NXF5Q9H1B4 397 aaKnown RBP12.95□□□□□ -0.34
HDLBP-229ENST00000460826 CXorf36Q9H7Y0 433 aa12.95□□□□□ -0.34
HDLBP-229ENST00000460826 FOLH1BQ9HBA9 442 aa12.95□□□□□ -0.34
HDLBP-229ENST00000460826 ZIM2Q9NZV7 527 aa12.95□□□□□ -0.34
HDLBP-229ENST00000460826 ABI3Q9P2A4 366 aa12.95□□□□□ -0.34
HDLBP-229ENST00000460826 HEMK1Q9Y5R4 338 aaPredicted RBP12.95□□□□□ -0.34
HDLBP-229ENST00000460826 COPG1Q9Y678 874 aaKnown RBP12.95□□□□□ -0.34
HDLBP-229ENST00000460826 SLC22A3O75751 556 aa12.94□□□□□ -0.34
HDLBP-229ENST00000460826 BCAS2O75934 225 aaPredicted RBP12.94□□□□□ -0.34
HDLBP-229ENST00000460826 SLITRK5O94991 958 aa12.94□□□□□ -0.34
HDLBP-229ENST00000460826 OR6B1O95007 311 aa12.94□□□□□ -0.34
HDLBP-229ENST00000460826 TROVE2P10155 538 aaKnown RBP eCLIP12.94□□□□□ -0.34
HDLBP-229ENST00000460826 CD1EP15812 388 aa12.94□□□□□ -0.34
HDLBP-229ENST00000460826 DDX5P17844 614 aaKnown RBP12.94□□□□□ -0.34
HDLBP-229ENST00000460826 KIR3DL1P43629 444 aa12.94□□□□□ -0.34
HDLBP-229ENST00000460826 MRPL19P49406 292 aaKnown RBP12.94□□□□□ -0.34
HDLBP-229ENST00000460826 HLCSP50747 726 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms