RNA–Protein interactions for RNA: ENST00000460060.5

C4A-244, Transcript of complement C4A (Rodgers blood group), humanhuman

TSL 3

Gene C4A, Length 628 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4A-244ENST00000460060 MRPL14Q6P1L8 145 aaKnown RBP11.91□□□□□ -0.5
C4A-244ENST00000460060 ASB18Q6ZVZ8 466 aa11.91□□□□□ -0.5
C4A-244ENST00000460060 ASRGL1Q7L266 308 aa11.91□□□□□ -0.5
C4A-244ENST00000460060 ARPINQ7Z6K5 226 aa11.91□□□□□ -0.5
C4A-244ENST00000460060 MSRB3Q8IXL7 192 aa11.91□□□□□ -0.5
C4A-244ENST00000460060 DEFB107AQ8IZN7 70 aa11.91□□□□□ -0.5
C4A-244ENST00000460060 TRIML2Q8N7C3 387 aa11.91□□□□□ -0.5
C4A-244ENST00000460060 PLPP5Q8NEB5 264 aa11.91□□□□□ -0.5
C4A-244ENST00000460060 PSMA8Q8TAA3 256 aa11.91□□□□□ -0.5
C4A-244ENST00000460060 SUN3Q8TAQ9 357 aa11.91□□□□□ -0.5
C4A-244ENST00000460060 ANKRD27Q96NW4 1050 aa11.91□□□□□ -0.5
C4A-244ENST00000460060 PELOQ9BRX2 385 aaKnown RBP11.91□□□□□ -0.5
C4A-244ENST00000460060 SLC39A3Q9BRY0 314 aa11.91□□□□□ -0.5
C4A-244ENST00000460060 ALOXE3Q9BYJ1 711 aa11.91□□□□□ -0.5
C4A-244ENST00000460060 CXorf36Q9H7Y0 433 aa11.91□□□□□ -0.5
C4A-244ENST00000460060 AKIRIN1Q9H9L7 192 aaPredicted RBP11.91□□□□□ -0.5
C4A-244ENST00000460060 NEUROD4Q9HD90 331 aa11.91□□□□□ -0.5
C4A-244ENST00000460060 NECTIN3Q9NQS3 549 aa11.91□□□□□ -0.5
C4A-244ENST00000460060 SLC6A13Q9NSD5 602 aa11.91□□□□□ -0.5
C4A-244ENST00000460060 VAPAQ9P0L0 249 aa11.91□□□□□ -0.5
C4A-244ENST00000460060 PLEKHB1Q9UF11 243 aaPredicted RBP11.91□□□□□ -0.5
C4A-244ENST00000460060 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.91□□□□□ -0.5
C4A-244ENST00000460060 NXT1Q9UKK6 140 aaKnown RBP11.91□□□□□ -0.5
C4A-244ENST00000460060 MKL2Q9ULH7 1088 aa11.91□□□□□ -0.5
C4A-244ENST00000460060 POLHQ9Y253 713 aa11.91□□□□□ -0.5
C4A-244ENST00000460060 PCDHB14Q9Y5E9 798 aa11.91□□□□□ -0.5
C4A-244ENST00000460060 MDC1Q14676 2089 aaKnown RBP11.9□□□□□ -0.5
C4A-244ENST00000460060 MYOCOSA0A1B0GUC4 107 aa11.9□□□□□ -0.5
C4A-244ENST00000460060 SYNDIG1LA6NDD5 238 aa11.9□□□□□ -0.5
C4A-244ENST00000460060 OR2W5A6NFC9 320 aa11.9□□□□□ -0.5
C4A-244ENST00000460060 TGFBR3LH3BV60 316 aa11.9□□□□□ -0.5
C4A-244ENST00000460060 OR10H2O60403 315 aa11.9□□□□□ -0.5
C4A-244ENST00000460060 DNAJC8O75937 253 aaPredicted RBP11.9□□□□□ -0.5
C4A-244ENST00000460060 RECKO95980 971 aa11.9□□□□□ -0.5
C4A-244ENST00000460060 ATP1B1P05026 303 aa11.9□□□□□ -0.5
C4A-244ENST00000460060 CD63P08962 238 aa11.9□□□□□ -0.5
C4A-244ENST00000460060 NT5EP21589 574 aa11.9□□□□□ -0.5
C4A-244ENST00000460060 UQCRC2P22695 453 aa11.9□□□□□ -0.5
C4A-244ENST00000460060 SLC6A2P23975 617 aa11.9□□□□□ -0.5
C4A-244ENST00000460060 STT3AP46977 705 aa11.9□□□□□ -0.5
C4A-244ENST00000460060 UQCRFS1P47985 274 aa11.9□□□□□ -0.5
C4A-244ENST00000460060 CDK9P50750 372 aaKnown RBP11.9□□□□□ -0.5
C4A-244ENST00000460060 SLC7A2P52569 658 aa11.9□□□□□ -0.5
C4A-244ENST00000460060 SPDYE7PQ495Y7 208 aa11.9□□□□□ -0.5
C4A-244ENST00000460060 GTDC1Q4AE62 458 aa11.9□□□□□ -0.5
C4A-244ENST00000460060 FHL5Q5TD97 284 aa11.9□□□□□ -0.5
C4A-244ENST00000460060 NANOGP8Q6NSW7 305 aa11.9□□□□□ -0.5
C4A-244ENST00000460060 FAM199XQ6PEV8 388 aaPredicted RBP11.9□□□□□ -0.5
C4A-244ENST00000460060 ZNF517Q6ZMY9 492 aaPredicted RBP11.9□□□□□ -0.5
C4A-244ENST00000460060 PRSS58Q8IYP2 241 aa11.9□□□□□ -0.5
C4A-244ENST00000460060 ST13P4Q8IZP2 240 aaPredicted RBP11.9□□□□□ -0.5
C4A-244ENST00000460060 OR8J3Q8NGG0 315 aa11.9□□□□□ -0.5
C4A-244ENST00000460060 OR9A2Q8NGT5 310 aa11.9□□□□□ -0.5
C4A-244ENST00000460060 RBM18Q96H35 190 aaKnown RBP11.9□□□□□ -0.5
C4A-244ENST00000460060 DGAT2Q96PD7 388 aa11.9□□□□□ -0.5
C4A-244ENST00000460060 CDRT15Q96T59 188 aa11.9□□□□□ -0.5
C4A-244ENST00000460060 SH3GL1Q99961 368 aa11.9□□□□□ -0.5
C4A-244ENST00000460060 CADM1Q9BY67 442 aaKnown RBP11.9□□□□□ -0.5
C4A-244ENST00000460060 SOX17Q9H6I2 414 aaPredicted RBP11.9□□□□□ -0.5
C4A-244ENST00000460060 WDR54Q9H977 334 aa11.9□□□□□ -0.5
C4A-244ENST00000460060 NANOGQ9H9S0 305 aa11.9□□□□□ -0.5
C4A-244ENST00000460060 SPAG4Q9NPE6 437 aa11.9□□□□□ -0.5
C4A-244ENST00000460060 SIRT3Q9NTG7 399 aaPredicted RBP11.9□□□□□ -0.5
C4A-244ENST00000460060 SLC25A37Q9NYZ2 338 aa11.9□□□□□ -0.5
C4A-244ENST00000460060 CLDN16Q9Y5I7 305 aa11.9□□□□□ -0.5
C4A-244ENST00000460060 SNX8Q9Y5X2 465 aa11.9□□□□□ -0.5
C4A-244ENST00000460060 HIVEP3Q5T1R4 2406 aa11.9□□□□□ -0.5
C4A-244ENST00000460060 UNC79Q9P2D8 2635 aa11.9□□□□□ -0.51
C4A-244ENST00000460060 IGKV3D-11A0A0A0MRZ8 115 aa11.89□□□□□ -0.51
C4A-244ENST00000460060 EMC8O43402 210 aa11.89□□□□□ -0.51
C4A-244ENST00000460060 CNOT3O75175 753 aaKnown RBP11.89□□□□□ -0.51
C4A-244ENST00000460060 SLITRK5O94991 958 aa11.89□□□□□ -0.51
C4A-244ENST00000460060 AGFG2O95081 481 aa11.89□□□□□ -0.51
C4A-244ENST00000460060 KRT75O95678 551 aa11.89□□□□□ -0.51
C4A-244ENST00000460060 PDGFAP04085 211 aa11.89□□□□□ -0.51
C4A-244ENST00000460060 IFNA16P05015 189 aa11.89□□□□□ -0.51
C4A-244ENST00000460060 HEXBP07686 556 aa11.89□□□□□ -0.51
C4A-244ENST00000460060 IFI6P09912 130 aa11.89□□□□□ -0.51
C4A-244ENST00000460060 TNNI3P19429 210 aa11.89□□□□□ -0.51
C4A-244ENST00000460060 GNLYP22749 145 aa11.89□□□□□ -0.51
C4A-244ENST00000460060 PPIBP23284 216 aaKnown RBP11.89□□□□□ -0.51
C4A-244ENST00000460060 GALNSP34059 522 aa11.89□□□□□ -0.51
C4A-244ENST00000460060 PTGER1P34995 402 aa11.89□□□□□ -0.51
C4A-244ENST00000460060 SOAT1P35610 550 aa11.89□□□□□ -0.51
C4A-244ENST00000460060 PGM1P36871 562 aa11.89□□□□□ -0.51
C4A-244ENST00000460060 EMP2P54851 167 aa11.89□□□□□ -0.51
C4A-244ENST00000460060 GAB1Q13480 694 aa11.89□□□□□ -0.51
C4A-244ENST00000460060 NCF4Q15080 339 aa11.89□□□□□ -0.51
C4A-244ENST00000460060 LTB4RQ15722 352 aa11.89□□□□□ -0.51
C4A-244ENST00000460060 NSDHLQ15738 373 aa11.89□□□□□ -0.51
C4A-244ENST00000460060 ZNF628Q5EBL2 1059 aa11.89□□□□□ -0.51
C4A-244ENST00000460060 FAM198BQ6UWH4 519 aa11.89□□□□□ -0.51
C4A-244ENST00000460060 TMEM64Q6YI46 380 aa11.89□□□□□ -0.51
C4A-244ENST00000460060 BNC2Q6ZN30 1099 aaPredicted RBP11.89□□□□□ -0.51
C4A-244ENST00000460060 SHISA6Q6ZSJ9 500 aa11.89□□□□□ -0.51
C4A-244ENST00000460060 LAPTM4BQ86VI4 370 aa11.89□□□□□ -0.51
C4A-244ENST00000460060 KIF2BQ8N4N8 673 aa11.89□□□□□ -0.51
C4A-244ENST00000460060 GALNT11Q8NCW6 608 aa11.89□□□□□ -0.51
C4A-244ENST00000460060 ZNF675Q8TD23 568 aa11.89□□□□□ -0.51
C4A-244ENST00000460060 ZFP90Q8TF47 636 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms