RNA–Protein interactions for RNA: ENST00000459727.5

HDAC3-202, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 524 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-202ENST00000459727 ARMC5Q96C12 935 aa8.35□□□□□ -1.07
HDAC3-202ENST00000459727 C12orf66Q96MD2 445 aa8.35□□□□□ -1.07
HDAC3-202ENST00000459727 PRAP1Q96NZ9 151 aa8.35□□□□□ -1.07
HDAC3-202ENST00000459727 ACAT2Q9BWD1 397 aa8.35□□□□□ -1.07
HDAC3-202ENST00000459727 BTBD1Q9H0C5 482 aa8.35□□□□□ -1.07
HDAC3-202ENST00000459727 RSPH9Q9H1X1 276 aaPredicted RBP8.35□□□□□ -1.07
HDAC3-202ENST00000459727 KIR3DX1Q9H7L2 352 aa8.35□□□□□ -1.07
HDAC3-202ENST00000459727 EXOSC4Q9NPD3 245 aaKnown RBP8.35□□□□□ -1.07
HDAC3-202ENST00000459727 SLAMF7Q9NQ25 335 aa8.35□□□□□ -1.07
HDAC3-202ENST00000459727 PRSS16Q9NQE7 514 aa8.35□□□□□ -1.07
HDAC3-202ENST00000459727 CUEDC1Q9NWM3 386 aaPredicted RBP8.35□□□□□ -1.07
HDAC3-202ENST00000459727 ADAM30Q9UKF2 790 aa8.35□□□□□ -1.07
HDAC3-202ENST00000459727 FBXL21Q9UKT6 434 aa8.35□□□□□ -1.07
HDAC3-202ENST00000459727 A4GNTQ9UNA3 340 aa8.35□□□□□ -1.07
HDAC3-202ENST00000459727 TMEM98Q9Y2Y6 226 aa8.35□□□□□ -1.07
HDAC3-202ENST00000459727 CMAHPQ9Y471 501 aa8.35□□□□□ -1.07
HDAC3-202ENST00000459727 PCDHGB2Q9Y5G2 931 aa8.35□□□□□ -1.07
HDAC3-202ENST00000459727 HCFC2Q9Y5Z7 792 aa8.35□□□□□ -1.07
HDAC3-202ENST00000459727 ZNF780BQ9Y6R6 833 aa8.35□□□□□ -1.07
HDAC3-202ENST00000459727 TBC1D3KA0A087X1G2 549 aa8.34□□□□□ -1.07
HDAC3-202ENST00000459727 TBC1D3FA6NER0 549 aaPredicted RBP8.34□□□□□ -1.07
HDAC3-202ENST00000459727 IGLON5A6NGN9 336 aa8.34□□□□□ -1.07
HDAC3-202ENST00000459727 AKAP8O43823 692 aaKnown RBP8.34□□□□□ -1.07
HDAC3-202ENST00000459727 TPST2O60704 377 aa8.34□□□□□ -1.07
HDAC3-202ENST00000459727 CSO75390 466 aaKnown RBP8.34□□□□□ -1.07
HDAC3-202ENST00000459727 PCDH8O95206 1070 aa8.34□□□□□ -1.07
HDAC3-202ENST00000459727 OR5F1O95221 314 aa8.34□□□□□ -1.07
HDAC3-202ENST00000459727 TBX6O95947 436 aaPredicted RBP8.34□□□□□ -1.07
HDAC3-202ENST00000459727 AK1P00568 194 aa8.34□□□□□ -1.07
HDAC3-202ENST00000459727 HMGN1P05114 100 aa8.34□□□□□ -1.07
HDAC3-202ENST00000459727 KRT8P05787 483 aa8.34□□□□□ -1.07
HDAC3-202ENST00000459727 FPR3P25089 353 aa8.34□□□□□ -1.07
HDAC3-202ENST00000459727 ITGB8P26012 769 aa8.34□□□□□ -1.07
HDAC3-202ENST00000459727 FGF9P31371 208 aaPredicted RBP8.34□□□□□ -1.07
HDAC3-202ENST00000459727 GABRA5P31644 462 aa8.34□□□□□ -1.07
HDAC3-202ENST00000459727 BUD31P41223 144 aaPredicted RBP8.34□□□□□ -1.07
HDAC3-202ENST00000459727 IL12RB1P42701 662 aa8.34□□□□□ -1.07
HDAC3-202ENST00000459727 MAGEA10P43363 369 aaPredicted RBP8.34□□□□□ -1.07
HDAC3-202ENST00000459727 RPS5P46782 204 aaKnown RBP8.34□□□□□ -1.07
HDAC3-202ENST00000459727 GIPRP48546 466 aa8.34□□□□□ -1.07
HDAC3-202ENST00000459727 SLC9A3P48764 834 aa8.34□□□□□ -1.07
HDAC3-202ENST00000459727 CASP9P55211 416 aa8.34□□□□□ -1.07
HDAC3-202ENST00000459727 TAS2R41P59536 307 aa8.34□□□□□ -1.07
HDAC3-202ENST00000459727 RPS15AP62244 130 aaKnown RBP8.34□□□□□ -1.07
HDAC3-202ENST00000459727 RPS26P62854 115 aaKnown RBP8.34□□□□□ -1.07
HDAC3-202ENST00000459727 BDH1Q02338 343 aa8.34□□□□□ -1.07
HDAC3-202ENST00000459727 SCN1BQ07699 218 aa8.34□□□□□ -1.07
HDAC3-202ENST00000459727 SLAMF1Q13291 335 aa8.34□□□□□ -1.07
HDAC3-202ENST00000459727 DSG2Q14126 1118 aa8.34□□□□□ -1.07
HDAC3-202ENST00000459727 SSX1Q16384 188 aa8.34□□□□□ -1.07
HDAC3-202ENST00000459727 GAB4Q2WGN9 574 aa8.34□□□□□ -1.07
HDAC3-202ENST00000459727 UAP1L1Q3KQV9 507 aa8.34□□□□□ -1.07
HDAC3-202ENST00000459727 PLK5Q496M5 336 aa8.34□□□□□ -1.07
HDAC3-202ENST00000459727 SYT14P1Q58G82 188 aa8.34□□□□□ -1.07
HDAC3-202ENST00000459727 FAM78AQ5JUQ0 283 aa8.34□□□□□ -1.07
HDAC3-202ENST00000459727 IER5LQ5T953 404 aa8.34□□□□□ -1.07
HDAC3-202ENST00000459727 DDI2Q5TDH0 399 aa8.34□□□□□ -1.07
HDAC3-202ENST00000459727 ZNF697Q5TEC3 545 aa8.34□□□□□ -1.07
HDAC3-202ENST00000459727 AGBL4Q5VU57 503 aa8.34□□□□□ -1.07
HDAC3-202ENST00000459727 TBC1D3GQ6DHY5 549 aa8.34□□□□□ -1.07
HDAC3-202ENST00000459727 SLC48A1Q6P1K1 146 aa8.34□□□□□ -1.07
HDAC3-202ENST00000459727 ABHD17CQ6PCB6 329 aa8.34□□□□□ -1.07
HDAC3-202ENST00000459727 METAP1DQ6UB28 335 aaPredicted RBP8.34□□□□□ -1.07
HDAC3-202ENST00000459727 USP30Q70CQ3 517 aa8.34□□□□□ -1.07
HDAC3-202ENST00000459727 SZRD1Q7Z422 152 aa8.34□□□□□ -1.07
HDAC3-202ENST00000459727 NRROSQ86YC3 692 aa8.34□□□□□ -1.07
HDAC3-202ENST00000459727 GID4Q8IVV7 300 aa8.34□□□□□ -1.07
HDAC3-202ENST00000459727 TCEANCQ8N8B7 351 aa8.34□□□□□ -1.07
HDAC3-202ENST00000459727 FAM181AQ8N9Y4 354 aa8.34□□□□□ -1.07
HDAC3-202ENST00000459727 RAB8BQ92930 207 aa8.34□□□□□ -1.07
HDAC3-202ENST00000459727 GAL3ST3Q96A11 431 aa8.34□□□□□ -1.07
HDAC3-202ENST00000459727 SLC25A46Q96AG3 418 aa8.34□□□□□ -1.07
HDAC3-202ENST00000459727 MS4A6EQ96DS6 147 aa8.34□□□□□ -1.07
HDAC3-202ENST00000459727 CHFRQ96EP1 664 aa8.34□□□□□ -1.07
HDAC3-202ENST00000459727 PAWRQ96IZ0 340 aaKnown RBP8.34□□□□□ -1.07
HDAC3-202ENST00000459727 KCTD7Q96MP8 289 aa8.34□□□□□ -1.07
HDAC3-202ENST00000459727 MS4A4EQ96PG1 132 aa8.34□□□□□ -1.07
HDAC3-202ENST00000459727 OR5M11Q96RB7 305 aa8.34□□□□□ -1.07
HDAC3-202ENST00000459727 IL4I1Q96RQ9 567 aa8.34□□□□□ -1.07
HDAC3-202ENST00000459727 CDCA3Q99618 268 aaPredicted RBP8.34□□□□□ -1.07
HDAC3-202ENST00000459727 ARHGDIGQ99819 225 aa8.34□□□□□ -1.07
HDAC3-202ENST00000459727 SORBS1Q9BX66 1292 aaKnown RBP8.34□□□□□ -1.07
HDAC3-202ENST00000459727 JAM3Q9BX67 310 aa8.34□□□□□ -1.07
HDAC3-202ENST00000459727 ACTRT3Q9BYD9 372 aa8.34□□□□□ -1.07
HDAC3-202ENST00000459727 LMAN2LQ9H0V9 348 aa8.34□□□□□ -1.07
HDAC3-202ENST00000459727 ARMC7Q9H6L4 198 aa8.34□□□□□ -1.07
HDAC3-202ENST00000459727 ANKRA2Q9H9E1 313 aa8.34□□□□□ -1.07
HDAC3-202ENST00000459727 HHATLQ9HCP6 504 aa8.34□□□□□ -1.07
HDAC3-202ENST00000459727 ZDHHC4Q9NPG8 344 aa8.34□□□□□ -1.07
HDAC3-202ENST00000459727 LHX9Q9NQ69 397 aa8.34□□□□□ -1.07
HDAC3-202ENST00000459727 TEX10Q9NXF1 929 aaPredicted RBP8.34□□□□□ -1.07
HDAC3-202ENST00000459727 NLGN3Q9NZ94 848 aa8.34□□□□□ -1.07
HDAC3-202ENST00000459727 OR6C2Q9NZP2 312 aa8.34□□□□□ -1.07
HDAC3-202ENST00000459727 DNAJC27Q9NZQ0 273 aa8.34□□□□□ -1.07
HDAC3-202ENST00000459727 NTMQ9P121 344 aa8.34□□□□□ -1.07
HDAC3-202ENST00000459727 RHCGQ9UBD6 479 aa8.34□□□□□ -1.07
HDAC3-202ENST00000459727 TESQ9UGI8 421 aaKnown RBP8.34□□□□□ -1.07
HDAC3-202ENST00000459727 KLF15Q9UIH9 416 aa8.34□□□□□ -1.07
HDAC3-202ENST00000459727 PLAGL1Q9UM63 463 aa8.34□□□□□ -1.07
HDAC3-202ENST00000459727 SCML1Q9UN30 329 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms