RNA–Protein interactions for RNA: ENST00000458530.1

VPS50-207, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 667 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-207ENST00000458530 OR5AK3PQ8NH89 298 aa8.4□□□□□ -1.06
VPS50-207ENST00000458530 RHBDD1Q8TEB9 315 aa8.4□□□□□ -1.06
VPS50-207ENST00000458530 RASSF5Q8WWW0 418 aa8.4□□□□□ -1.06
VPS50-207ENST00000458530 KLHL6Q8WZ60 621 aa8.4□□□□□ -1.06
VPS50-207ENST00000458530 SDCCAG3Q96C92 435 aa8.4□□□□□ -1.06
VPS50-207ENST00000458530 CNRIP1Q96F85 164 aaPredicted RBP8.4□□□□□ -1.06
VPS50-207ENST00000458530 CENPNQ96H22 339 aaPredicted RBP8.4□□□□□ -1.06
VPS50-207ENST00000458530 MS4A4EQ96PG1 132 aa8.4□□□□□ -1.06
VPS50-207ENST00000458530 TACO1Q9BSH4 297 aaKnown RBP8.4□□□□□ -1.06
VPS50-207ENST00000458530 NDC1Q9BTX1 674 aa8.4□□□□□ -1.06
VPS50-207ENST00000458530 BDH2Q9BUT1 245 aa8.4□□□□□ -1.06
VPS50-207ENST00000458530 CHST8Q9H2A9 424 aa8.4□□□□□ -1.06
VPS50-207ENST00000458530 LRRN3Q9H3W5 708 aa8.4□□□□□ -1.06
VPS50-207ENST00000458530 Q9H521 79 aa8.4□□□□□ -1.06
VPS50-207ENST00000458530 TRIM45Q9H8W5 580 aaPredicted RBP8.4□□□□□ -1.06
VPS50-207ENST00000458530 CACYBPQ9HB71 228 aaKnown RBP8.4□□□□□ -1.06
VPS50-207ENST00000458530 A4GALTQ9NPC4 353 aa8.4□□□□□ -1.06
VPS50-207ENST00000458530 SLAMF7Q9NQ25 335 aa8.4□□□□□ -1.06
VPS50-207ENST00000458530 SIRT3Q9NTG7 399 aaPredicted RBP8.4□□□□□ -1.06
VPS50-207ENST00000458530 CALML5Q9NZT1 146 aa8.4□□□□□ -1.06
VPS50-207ENST00000458530 C5AR2Q9P296 337 aa8.4□□□□□ -1.06
VPS50-207ENST00000458530 PTGFRNQ9P2B2 879 aa8.4□□□□□ -1.06
VPS50-207ENST00000458530 P2RX2Q9UBL9 471 aa8.4□□□□□ -1.06
VPS50-207ENST00000458530 RIMS3Q9UJD0 308 aa8.4□□□□□ -1.06
VPS50-207ENST00000458530 BAG5Q9UL15 447 aa8.4□□□□□ -1.06
VPS50-207ENST00000458530 C15orf41Q9Y2V0 281 aa8.4□□□□□ -1.06
VPS50-207ENST00000458530 MAP4K5Q9Y4K4 846 aa8.4□□□□□ -1.06
VPS50-207ENST00000458530 A0A0A6YYC8 382 aaPredicted RBP8.39□□□□□ -1.07
VPS50-207ENST00000458530 ZNF860A6NHJ4 632 aa8.39□□□□□ -1.07
VPS50-207ENST00000458530 DUXAA6NLW8 204 aa8.39□□□□□ -1.07
VPS50-207ENST00000458530 I3L1I5 382 aaPredicted RBP8.39□□□□□ -1.07
VPS50-207ENST00000458530 SGK494L7N484 410 aa8.39□□□□□ -1.07
VPS50-207ENST00000458530 CHST10O43529 356 aa8.39□□□□□ -1.07
VPS50-207ENST00000458530 ASNA1O43681 348 aa8.39□□□□□ -1.07
VPS50-207ENST00000458530 COQ9O75208 318 aa8.39□□□□□ -1.07
VPS50-207ENST00000458530 TNFRSF21O75509 655 aa8.39□□□□□ -1.07
VPS50-207ENST00000458530 ZNF682O95780 498 aa8.39□□□□□ -1.07
VPS50-207ENST00000458530 ATP1B1P05026 303 aa8.39□□□□□ -1.07
VPS50-207ENST00000458530 RPLP0P05388 317 aaKnown RBP8.39□□□□□ -1.07
VPS50-207ENST00000458530 GP1BAP07359 652 aa8.39□□□□□ -1.07
VPS50-207ENST00000458530 HBQ1P09105 142 aa8.39□□□□□ -1.07
VPS50-207ENST00000458530 ETFAP13804 333 aa8.39□□□□□ -1.07
VPS50-207ENST00000458530 KDELR2P33947 212 aa8.39□□□□□ -1.07
VPS50-207ENST00000458530 SOX11P35716 441 aa8.39□□□□□ -1.07
VPS50-207ENST00000458530 FEN1P39748 380 aaKnown RBP8.39□□□□□ -1.07
VPS50-207ENST00000458530 SEPHS1P49903 392 aa8.39□□□□□ -1.07
VPS50-207ENST00000458530 XKP51811 444 aa8.39□□□□□ -1.07
VPS50-207ENST00000458530 CDK6Q00534 326 aa8.39□□□□□ -1.07
VPS50-207ENST00000458530 CFHR1Q03591 330 aa8.39□□□□□ -1.07
VPS50-207ENST00000458530 LCE2AQ5TA79 106 aaPredicted RBP8.39□□□□□ -1.07
VPS50-207ENST00000458530 OGFRL1Q5TC84 451 aaPredicted RBP8.39□□□□□ -1.07
VPS50-207ENST00000458530 PRAMEF8Q5VWM4 474 aa8.39□□□□□ -1.07
VPS50-207ENST00000458530 PRAMEF7Q5VXH5 474 aa8.39□□□□□ -1.07
VPS50-207ENST00000458530 REEP3Q6NUK4 255 aa8.39□□□□□ -1.07
VPS50-207ENST00000458530 TREML4Q6UXN2 200 aa8.39□□□□□ -1.07
VPS50-207ENST00000458530 CCDC80Q76M96 950 aa8.39□□□□□ -1.07
VPS50-207ENST00000458530 EIF3MQ7L2H7 374 aaKnown RBP8.39□□□□□ -1.07
VPS50-207ENST00000458530 BPHLQ86WA6 291 aaPredicted RBP8.39□□□□□ -1.07
VPS50-207ENST00000458530 KRT73Q86Y46 540 aa8.39□□□□□ -1.07
VPS50-207ENST00000458530 PTOV1Q86YD1 416 aa8.39□□□□□ -1.07
VPS50-207ENST00000458530 PDSS2Q86YH6 399 aa8.39□□□□□ -1.07
VPS50-207ENST00000458530 CCDC116Q8IYX3 515 aa8.39□□□□□ -1.07
VPS50-207ENST00000458530 CACTIN-AS1Q8N1I8 211 aa8.39□□□□□ -1.07
VPS50-207ENST00000458530 ARHGEF39Q8N4T4 335 aa8.39□□□□□ -1.07
VPS50-207ENST00000458530 PACRGLQ8N7B6 248 aa8.39□□□□□ -1.07
VPS50-207ENST00000458530 ICA1LQ8NDH6 482 aa8.39□□□□□ -1.07
VPS50-207ENST00000458530 OR9A4Q8NGU2 314 aa8.39□□□□□ -1.07
VPS50-207ENST00000458530 FBXO30Q8TB52 745 aa8.39□□□□□ -1.07
VPS50-207ENST00000458530 IFI44Q8TCB0 444 aa8.39□□□□□ -1.07
VPS50-207ENST00000458530 MIPOL1Q8TD10 442 aa8.39□□□□□ -1.07
VPS50-207ENST00000458530 ZNF675Q8TD23 568 aa8.39□□□□□ -1.07
VPS50-207ENST00000458530 DNAJC9Q8WXX5 260 aa8.39□□□□□ -1.07
VPS50-207ENST00000458530 EME1Q96AY2 570 aa8.39□□□□□ -1.07
VPS50-207ENST00000458530 NXPE2Q96DL1 559 aa8.39□□□□□ -1.07
VPS50-207ENST00000458530 MMABQ96EY8 250 aaPredicted RBP8.39□□□□□ -1.07
VPS50-207ENST00000458530 PYURFQ96I23 114 aa8.39□□□□□ -1.07
VPS50-207ENST00000458530 C10orf90Q96M02 699 aa8.39□□□□□ -1.07
VPS50-207ENST00000458530 ZNF681Q96N22 645 aa8.39□□□□□ -1.07
VPS50-207ENST00000458530 ZNF578Q96N58 590 aaPredicted RBP8.39□□□□□ -1.07
VPS50-207ENST00000458530 OR1F2PQ96R84 312 aa8.39□□□□□ -1.07
VPS50-207ENST00000458530 GFM1Q96RP9 751 aaKnown RBP8.39□□□□□ -1.07
VPS50-207ENST00000458530 ZNF607Q96SK3 696 aa8.39□□□□□ -1.07
VPS50-207ENST00000458530 SEPHS2Q99611 448 aa8.39□□□□□ -1.07
VPS50-207ENST00000458530 ZNF184Q99676 751 aaPredicted RBP8.39□□□□□ -1.07
VPS50-207ENST00000458530 C9orf16Q9BUW7 83 aa8.39□□□□□ -1.07
VPS50-207ENST00000458530 SPATA5L1Q9BVQ7 753 aa8.39□□□□□ -1.07
VPS50-207ENST00000458530 SLC7A5P2Q9GIP4 190 aa8.39□□□□□ -1.07
VPS50-207ENST00000458530 NRSN2Q9GZP1 204 aa8.39□□□□□ -1.07
VPS50-207ENST00000458530 EPS8L2Q9H6S3 715 aa8.39□□□□□ -1.07
VPS50-207ENST00000458530 SYNDIG1Q9H7V2 258 aa8.39□□□□□ -1.07
VPS50-207ENST00000458530 STARD5Q9NSY2 213 aa8.39□□□□□ -1.07
VPS50-207ENST00000458530 CUTCQ9NTM9 273 aa8.39□□□□□ -1.07
VPS50-207ENST00000458530 DDX18Q9NVP1 670 aaKnown RBP8.39□□□□□ -1.07
VPS50-207ENST00000458530 ACSL6Q9UKU0 697 aa8.39□□□□□ -1.07
VPS50-207ENST00000458530 CNOT11Q9UKZ1 510 aaKnown RBP8.39□□□□□ -1.07
VPS50-207ENST00000458530 USP22Q9UPT9 525 aa8.39□□□□□ -1.07
VPS50-207ENST00000458530 MRPS2Q9Y399 296 aaKnown RBP8.39□□□□□ -1.07
VPS50-207ENST00000458530 DTNAQ9Y4J8 743 aa8.39□□□□□ -1.07
VPS50-207ENST00000458530 PCDHGB3Q9Y5G1 929 aa8.39□□□□□ -1.07
VPS50-207ENST00000458530 PCDHGA1Q9Y5H4 931 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms