RNA–Protein interactions for RNA: ENST00000453937.2

LAMA4-209, Transcript of laminin subunit alpha 4, humanhuman

TSL 1 (best) BASIC

Gene LAMA4, Length 645 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA4-209ENST00000453937 CNPPD1Q9BV87 410 aa13.52□□□□□ -0.25
LAMA4-209ENST00000453937 PAIP1Q9H074 479 aaKnown RBP13.52□□□□□ -0.25
LAMA4-209ENST00000453937 ING2Q9H160 280 aa13.52□□□□□ -0.25
LAMA4-209ENST00000453937 ATP13A2Q9NQ11 1180 aa13.52□□□□□ -0.25
LAMA4-209ENST00000453937 PTGFRNQ9P2B2 879 aa13.52□□□□□ -0.25
LAMA4-209ENST00000453937 DTX4Q9Y2E6 619 aa13.52□□□□□ -0.25
LAMA4-209ENST00000453937 CAPN7Q9Y6W3 813 aa13.52□□□□□ -0.25
LAMA4-209ENST00000453937 DSPP15924 2871 aaKnown RBP13.52□□□□□ -0.25
LAMA4-209ENST00000453937 TRBV5-3A0A0A0MS03 114 aa13.51□□□□□ -0.25
LAMA4-209ENST00000453937 NR5A2O00482 541 aa13.51□□□□□ -0.25
LAMA4-209ENST00000453937 NDUFAB1O14561 156 aa13.51□□□□□ -0.25
LAMA4-209ENST00000453937 SNRPB2P08579 225 aaKnown RBP13.51□□□□□ -0.25
LAMA4-209ENST00000453937 ZCCHC18P0CG32 403 aa13.51□□□□□ -0.25
LAMA4-209ENST00000453937 ICAM2P13598 275 aa13.51□□□□□ -0.25
LAMA4-209ENST00000453937 SOX11P35716 441 aa13.51□□□□□ -0.25
LAMA4-209ENST00000453937 RRADP55042 308 aa13.51□□□□□ -0.25
LAMA4-209ENST00000453937 KCNK10P57789 538 aa13.51□□□□□ -0.25
LAMA4-209ENST00000453937 LRRC74AQ0VAA2 488 aa13.51□□□□□ -0.25
LAMA4-209ENST00000453937 GAB1Q13480 694 aa13.51□□□□□ -0.25
LAMA4-209ENST00000453937 LRIF1Q5T3J3 769 aa13.51□□□□□ -0.25
LAMA4-209ENST00000453937 SLC2A7Q6PXP3 512 aa13.51□□□□□ -0.25
LAMA4-209ENST00000453937 DLEU7Q6UYE1 221 aa13.51□□□□□ -0.25
LAMA4-209ENST00000453937 MSRB3Q8IXL7 192 aa13.51□□□□□ -0.25
LAMA4-209ENST00000453937 KBTBD2Q8IY47 623 aa13.51□□□□□ -0.25
LAMA4-209ENST00000453937 DPP10Q8N608 796 aa13.51□□□□□ -0.25
LAMA4-209ENST00000453937 CCDC197Q8NCU1 140 aa13.51□□□□□ -0.25
LAMA4-209ENST00000453937 C16orf52Q8NHV5 167 aa13.51□□□□□ -0.25
LAMA4-209ENST00000453937 ADIPOR1Q96A54 375 aa13.51□□□□□ -0.25
LAMA4-209ENST00000453937 FAM120BQ96EK7 910 aaKnown RBP13.51□□□□□ -0.25
LAMA4-209ENST00000453937 ART5Q96L15 291 aa13.51□□□□□ -0.25
LAMA4-209ENST00000453937 OR10A5Q9H207 317 aa13.51□□□□□ -0.25
LAMA4-209ENST00000453937 NEUROD4Q9HD90 331 aa13.51□□□□□ -0.25
LAMA4-209ENST00000453937 MAP10Q9P2G4 905 aa13.51□□□□□ -0.25
LAMA4-209ENST00000453937 CPAMD8Q8IZJ3 1885 aa13.5□□□□□ -0.25
LAMA4-209ENST00000453937 ITPR1Q14643 2758 aa13.5□□□□□ -0.25
LAMA4-209ENST00000453937 CCDC154A6NI56 674 aa13.5□□□□□ -0.25
LAMA4-209ENST00000453937 OR6C76A6NM76 312 aa13.5□□□□□ -0.25
LAMA4-209ENST00000453937 NME6O75414 186 aaPredicted RBP13.5□□□□□ -0.25
LAMA4-209ENST00000453937 TRPC1P48995 793 aa13.5□□□□□ -0.25
LAMA4-209ENST00000453937 CLCN2P51788 898 aa13.5□□□□□ -0.25
LAMA4-209ENST00000453937 RNF4P78317 190 aa13.5□□□□□ -0.25
LAMA4-209ENST00000453937 EBPQ15125 230 aaKnown RBP13.5□□□□□ -0.25
LAMA4-209ENST00000453937 MAPKAPK3Q16644 382 aa13.5□□□□□ -0.25
LAMA4-209ENST00000453937 TBR1Q16650 682 aa13.5□□□□□ -0.25
LAMA4-209ENST00000453937 JMJD6Q6NYC1 403 aaPredicted RBP13.5□□□□□ -0.25
LAMA4-209ENST00000453937 GALNT16Q8N428 558 aa13.5□□□□□ -0.25
LAMA4-209ENST00000453937 FITM2Q8N6M3 262 aa13.5□□□□□ -0.25
LAMA4-209ENST00000453937 VPS37AQ8NEZ2 397 aa13.5□□□□□ -0.25
LAMA4-209ENST00000453937 OR52R1Q8NGF1 315 aa13.5□□□□□ -0.25
LAMA4-209ENST00000453937 SFXN5Q8TD22 340 aa13.5□□□□□ -0.25
LAMA4-209ENST00000453937 VSTM2LQ96N03 204 aa13.5□□□□□ -0.25
LAMA4-209ENST00000453937 SLC25A23Q9BV35 468 aa13.5□□□□□ -0.25
LAMA4-209ENST00000453937 LHPPQ9H008 270 aa13.5□□□□□ -0.25
LAMA4-209ENST00000453937 GPATCH2Q9NW75 528 aa13.5□□□□□ -0.25
LAMA4-209ENST00000453937 SLC25A37Q9NYZ2 338 aa13.5□□□□□ -0.25
LAMA4-209ENST00000453937 SLAMF8Q9P0V8 285 aa13.5□□□□□ -0.25
LAMA4-209ENST00000453937 HEMK1Q9Y5R4 338 aaPredicted RBP13.5□□□□□ -0.25
LAMA4-209ENST00000453937 GMEB1Q9Y692 573 aa13.5□□□□□ -0.25
LAMA4-209ENST00000453937 A0A096LPI6 279 aa13.49□□□□□ -0.25
LAMA4-209ENST00000453937 TRBV11-1A0A0K0K1C0 115 aa13.49□□□□□ -0.25
LAMA4-209ENST00000453937 EMC8O43402 210 aa13.49□□□□□ -0.25
LAMA4-209ENST00000453937 DYRK3O43781 588 aa13.49□□□□□ -0.25
LAMA4-209ENST00000453937 MAN1A2O60476 641 aa13.49□□□□□ -0.25
LAMA4-209ENST00000453937 ZNF354AO60765 605 aaPredicted RBP13.49□□□□□ -0.25
LAMA4-209ENST00000453937 BCAS2O75934 225 aaPredicted RBP13.49□□□□□ -0.25
LAMA4-209ENST00000453937 DCTN3O75935 186 aa13.49□□□□□ -0.25
LAMA4-209ENST00000453937 UQCRC2P22695 453 aa13.49□□□□□ -0.25
LAMA4-209ENST00000453937 CCT3P49368 545 aaKnown RBP13.49□□□□□ -0.25
LAMA4-209ENST00000453937 MAN2A2P49641 1150 aa13.49□□□□□ -0.25
LAMA4-209ENST00000453937 MVDP53602 400 aa13.49□□□□□ -0.25
LAMA4-209ENST00000453937 CXADRP78310 365 aa13.49□□□□□ -0.25
LAMA4-209ENST00000453937 MYBPC3Q14896 1274 aa13.49□□□□□ -0.25
LAMA4-209ENST00000453937 GTDC1Q4AE62 458 aa13.49□□□□□ -0.25
LAMA4-209ENST00000453937 COQ5Q5HYK3 327 aa13.49□□□□□ -0.25
LAMA4-209ENST00000453937 HSDL2Q6YN16 418 aa13.49□□□□□ -0.25
LAMA4-209ENST00000453937 RNF111Q6ZNA4 994 aa13.49□□□□□ -0.25
LAMA4-209ENST00000453937 GPR155Q7Z3F1 870 aa13.49□□□□□ -0.25
LAMA4-209ENST00000453937 SNX32Q86XE0 403 aa13.49□□□□□ -0.25
LAMA4-209ENST00000453937 CLEC4FQ8N1N0 589 aa13.49□□□□□ -0.25
LAMA4-209ENST00000453937 CLEC1AQ8NC01 280 aa13.49□□□□□ -0.25
LAMA4-209ENST00000453937 OR4A15Q8NGL6 344 aa13.49□□□□□ -0.25
LAMA4-209ENST00000453937 RP9Q8TA86 221 aaKnown RBP13.49□□□□□ -0.25
LAMA4-209ENST00000453937 NUBPLQ8TB37 319 aa13.49□□□□□ -0.25
LAMA4-209ENST00000453937 APOBEC4Q8WW27 367 aaKnown RBP13.49□□□□□ -0.25
LAMA4-209ENST00000453937 THOC3Q96J01 351 aaKnown RBP13.49□□□□□ -0.25
LAMA4-209ENST00000453937 ITCHQ96J02 903 aa13.49□□□□□ -0.25
LAMA4-209ENST00000453937 LRRC37BQ96QE4 947 aa13.49□□□□□ -0.25
LAMA4-209ENST00000453937 WWTR1Q9GZV5 400 aa13.49□□□□□ -0.25
LAMA4-209ENST00000453937 SERHL2Q9H4I8 314 aa13.49□□□□□ -0.25
LAMA4-209ENST00000453937 ZNF552Q9H707 407 aaPredicted RBP13.49□□□□□ -0.25
LAMA4-209ENST00000453937 LEF1Q9UJU2 399 aaPredicted RBP13.49□□□□□ -0.25
LAMA4-209ENST00000453937 FXYD1O00168 92 aa13.48□□□□□ -0.25
LAMA4-209ENST00000453937 RFXANKO14593 260 aa13.48□□□□□ -0.25
LAMA4-209ENST00000453937 PRAMEF2O60811 474 aa13.48□□□□□ -0.25
LAMA4-209ENST00000453937 NADKO95544 446 aaPredicted RBP13.48□□□□□ -0.25
LAMA4-209ENST00000453937 CPSF4O95639 269 aaKnown RBP13.48□□□□□ -0.25
LAMA4-209ENST00000453937 ITGB2P05107 769 aa13.48□□□□□ -0.25
LAMA4-209ENST00000453937 GSNP06396 782 aa13.48□□□□□ -0.25
LAMA4-209ENST00000453937 ABCB1P08183 1280 aaPredicted RBP13.48□□□□□ -0.25
LAMA4-209ENST00000453937 COX4I1P13073 169 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms