RNA–Protein interactions for RNA: ENST00000450169.6

LSM5-208, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM5, Length 2,258 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-208ENST00000450169 ZNF70Q9UC06 446 aaPredicted RBP8.17□□□□□ -1.1
LSM5-208ENST00000450169 MKL2Q9ULH7 1088 aa8.17□□□□□ -1.1
LSM5-208ENST00000450169 RPH3AQ9Y2J0 694 aaPredicted RBP8.17□□□□□ -1.1
LSM5-208ENST00000450169 COMMD10Q9Y6G5 202 aa8.17□□□□□ -1.1
LSM5-208ENST00000450169 CHURC1-FNTBB4DL54 471 aa8.17□□□□□ -1.1
LSM5-208ENST00000450169 WRBO00258 174 aa8.17□□□□□ -1.1
LSM5-208ENST00000450169 SULT1C2O00338 296 aa8.17□□□□□ -1.1
LSM5-208ENST00000450169 ZNF593O00488 134 aaPredicted RBP8.17□□□□□ -1.1
LSM5-208ENST00000450169 ADAM12O43184 909 aa8.17□□□□□ -1.1
LSM5-208ENST00000450169 PAGE1O75459 146 aa8.17□□□□□ -1.1
LSM5-208ENST00000450169 NDUFS3O75489 264 aa8.17□□□□□ -1.1
LSM5-208ENST00000450169 LRATO95237 230 aa8.17□□□□□ -1.1
LSM5-208ENST00000450169 IGHV2-70P01814 119 aa8.17□□□□□ -1.1
LSM5-208ENST00000450169 HPXP02790 462 aa8.17□□□□□ -1.1
LSM5-208ENST00000450169 NR2F6P10588 404 aa8.17□□□□□ -1.1
LSM5-208ENST00000450169 ARF4P18085 180 aaPredicted RBP8.17□□□□□ -1.1
LSM5-208ENST00000450169 PTAFRP25105 342 aa8.17□□□□□ -1.1
LSM5-208ENST00000450169 S100A11P31949 105 aa8.17□□□□□ -1.1
LSM5-208ENST00000450169 KIR3DL1P43629 444 aa8.17□□□□□ -1.1
LSM5-208ENST00000450169 PITPNBP48739 271 aa8.17□□□□□ -1.1
LSM5-208ENST00000450169 CCR6P51684 374 aa8.17□□□□□ -1.1
LSM5-208ENST00000450169 DAOAP59103 153 aa8.17□□□□□ -1.1
LSM5-208ENST00000450169 RAB8AP61006 207 aa8.17□□□□□ -1.1
LSM5-208ENST00000450169 CXCL9Q07325 125 aa8.17□□□□□ -1.1
LSM5-208ENST00000450169 TPBGQ13641 420 aa8.17□□□□□ -1.1
LSM5-208ENST00000450169 HACD4Q5VWC8 232 aa8.17□□□□□ -1.1
LSM5-208ENST00000450169 SEZ6L2Q6UXD5 910 aa8.17□□□□□ -1.1
LSM5-208ENST00000450169 DEF8Q6ZN54 512 aa8.17□□□□□ -1.1
LSM5-208ENST00000450169 MSANTD1Q6ZTZ1 278 aa8.17□□□□□ -1.1
LSM5-208ENST00000450169 BCDIN3DQ7Z5W3 292 aaKnown RBP8.17□□□□□ -1.1
LSM5-208ENST00000450169 PLEKHH3Q7Z736 793 aa8.17□□□□□ -1.1
LSM5-208ENST00000450169 LRRC28Q86X40 367 aaPredicted RBP8.17□□□□□ -1.1
LSM5-208ENST00000450169 IL17RCQ8NAC3 791 aa8.17□□□□□ -1.1
LSM5-208ENST00000450169 B3GALNT2Q8NCR0 500 aa8.17□□□□□ -1.1
LSM5-208ENST00000450169 TTC16Q8NEE8 873 aa8.17□□□□□ -1.1
LSM5-208ENST00000450169 DBF4BQ8NFT6 615 aa8.17□□□□□ -1.1
LSM5-208ENST00000450169 NEIL3Q8TAT5 605 aa8.17□□□□□ -1.1
LSM5-208ENST00000450169 GANCQ8TET4 914 aa8.17□□□□□ -1.1
LSM5-208ENST00000450169 GLYATL2Q8WU03 294 aa8.17□□□□□ -1.1
LSM5-208ENST00000450169 ATG4CQ96DT6 458 aa8.17□□□□□ -1.1
LSM5-208ENST00000450169 NARS2Q96I59 477 aaKnown RBP8.17□□□□□ -1.1
LSM5-208ENST00000450169 ACTR6Q9GZN1 396 aa8.17□□□□□ -1.1
LSM5-208ENST00000450169 CXCL16Q9H2A7 254 aa8.17□□□□□ -1.1
LSM5-208ENST00000450169 FN3KQ9H479 309 aa8.17□□□□□ -1.1
LSM5-208ENST00000450169 OSGEPL1Q9H4B0 414 aa8.17□□□□□ -1.1
LSM5-208ENST00000450169 BEX1Q9HBH7 125 aa8.17□□□□□ -1.1
LSM5-208ENST00000450169 STARD7Q9NQZ5 370 aa8.17□□□□□ -1.1
LSM5-208ENST00000450169 CYSLTR2Q9NS75 346 aa8.17□□□□□ -1.1
LSM5-208ENST00000450169 UXTQ9UBK9 157 aaPredicted RBP8.17□□□□□ -1.1
LSM5-208ENST00000450169 MIOXQ9UGB7 285 aa8.17□□□□□ -1.1
LSM5-208ENST00000450169 UBQLN1Q9UMX0 589 aaKnown RBP8.17□□□□□ -1.1
LSM5-208ENST00000450169 CHST2Q9Y4C5 530 aa8.17□□□□□ -1.1
LSM5-208ENST00000450169 AP1M2Q9Y6Q5 423 aa8.17□□□□□ -1.1
LSM5-208ENST00000450169 A0A0U1RQF3 1178 aa8.16□□□□□ -1.1
LSM5-208ENST00000450169 A0A1B0GW55 424 aa8.16□□□□□ -1.1
LSM5-208ENST00000450169 TRDV1A0A1B0GX56 115 aa8.16□□□□□ -1.1
LSM5-208ENST00000450169 OR6C75A6NL08 312 aa8.16□□□□□ -1.1
LSM5-208ENST00000450169 EFCAB7A8K855 629 aa8.16□□□□□ -1.1
LSM5-208ENST00000450169 MCRIP1C9JLW8 97 aa8.16□□□□□ -1.1
LSM5-208ENST00000450169 NFKBIEO00221 500 aa8.16□□□□□ -1.1
LSM5-208ENST00000450169 PRKYO43930 277 aa8.16□□□□□ -1.1
LSM5-208ENST00000450169 SUSD5O60279 629 aa8.16□□□□□ -1.1
LSM5-208ENST00000450169 NBNO60934 754 aa8.16□□□□□ -1.1
LSM5-208ENST00000450169 HPP00738 406 aa8.16□□□□□ -1.1
LSM5-208ENST00000450169 GASTP01350 101 aa8.16□□□□□ -1.1
LSM5-208ENST00000450169 OPN1SWP03999 348 aa8.16□□□□□ -1.1
LSM5-208ENST00000450169 MMP2P08253 660 aa8.16□□□□□ -1.1
LSM5-208ENST00000450169 ALPIP09923 528 aa8.16□□□□□ -1.1
LSM5-208ENST00000450169 ATXN1LP0C7T5 689 aaKnown RBP8.16□□□□□ -1.1
LSM5-208ENST00000450169 DUX4L2P0CJ85 424 aa8.16□□□□□ -1.1
LSM5-208ENST00000450169 DUX4L3P0CJ86 424 aa8.16□□□□□ -1.1
LSM5-208ENST00000450169 DUX4L4P0CJ87 422 aa8.16□□□□□ -1.1
LSM5-208ENST00000450169 DUX4L5P0CJ88 424 aa8.16□□□□□ -1.1
LSM5-208ENST00000450169 DUX4L6P0CJ89 424 aa8.16□□□□□ -1.1
LSM5-208ENST00000450169 DUX4L7P0CJ90 424 aa8.16□□□□□ -1.1
LSM5-208ENST00000450169 SDHBP21912 280 aa8.16□□□□□ -1.1
LSM5-208ENST00000450169 TACR1P25103 407 aa8.16□□□□□ -1.1
LSM5-208ENST00000450169 RBMS1P29558 406 aaKnown RBP8.16□□□□□ -1.1
LSM5-208ENST00000450169 CTSCP53634 463 aa8.16□□□□□ -1.1
LSM5-208ENST00000450169 IHHQ14623 411 aa8.16□□□□□ -1.1
LSM5-208ENST00000450169 SLC36A2Q495M3 483 aa8.16□□□□□ -1.1
LSM5-208ENST00000450169 IFI44LQ53G44 452 aa8.16□□□□□ -1.1
LSM5-208ENST00000450169 OR2G6Q5TZ20 316 aa8.16□□□□□ -1.1
LSM5-208ENST00000450169 ZNF425Q6IV72 752 aa8.16□□□□□ -1.1
LSM5-208ENST00000450169 CASP12Q6UXS9 341 aa8.16□□□□□ -1.1
LSM5-208ENST00000450169 RNF165Q6ZSG1 346 aa8.16□□□□□ -1.1
LSM5-208ENST00000450169 CLEC20AQ6ZU45 233 aa8.16□□□□□ -1.1
LSM5-208ENST00000450169 BTN2A1Q7KYR7 527 aa8.16□□□□□ -1.1
LSM5-208ENST00000450169 TMEM17Q86X19 198 aa8.16□□□□□ -1.1
LSM5-208ENST00000450169 GPR135Q8IZ08 494 aa8.16□□□□□ -1.1
LSM5-208ENST00000450169 TOMM5Q8N4H5 51 aa8.16□□□□□ -1.1
LSM5-208ENST00000450169 OR52I1Q8NGK6 324 aa8.16□□□□□ -1.1
LSM5-208ENST00000450169 OR5M9Q8NGP3 310 aa8.16□□□□□ -1.1
LSM5-208ENST00000450169 OR5M3Q8NGP4 307 aa8.16□□□□□ -1.1
LSM5-208ENST00000450169 OR56B4Q8NH76 319 aa8.16□□□□□ -1.1
LSM5-208ENST00000450169 ELP5Q8TE02 316 aa8.16□□□□□ -1.1
LSM5-208ENST00000450169 FAM151AQ8WW52 585 aa8.16□□□□□ -1.1
LSM5-208ENST00000450169 EDARADDQ8WWZ3 215 aa8.16□□□□□ -1.1
LSM5-208ENST00000450169 ACOT12Q8WYK0 555 aa8.16□□□□□ -1.1
LSM5-208ENST00000450169 MAL2Q969L2 176 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms