RNA–Protein interactions for RNA: ENST00000449954.1

LINC01961-201, Transcript of long intergenic non-protein coding RNA 1961, humanhuman

TSL 5 BASIC

Gene LINC01961, Length 745 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01961-201ENST00000449954 CASC4Q6P4E1 433 aa7.04□□□□□ -1.28
LINC01961-201ENST00000449954 LCTLQ6UWM7 567 aa7.04□□□□□ -1.28
LINC01961-201ENST00000449954 FAM214BQ7L5A3 538 aa7.04□□□□□ -1.28
LINC01961-201ENST00000449954 SLC29A4Q7RTT9 530 aa7.04□□□□□ -1.28
LINC01961-201ENST00000449954 CLNKQ7Z7G1 428 aa7.04□□□□□ -1.28
LINC01961-201ENST00000449954 LINC00523Q86TU6 105 aa7.04□□□□□ -1.28
LINC01961-201ENST00000449954 CDKL3Q8IVW4 592 aaPredicted RBP7.04□□□□□ -1.28
LINC01961-201ENST00000449954 REXO1L1PQ8IX06 675 aa7.04□□□□□ -1.28
LINC01961-201ENST00000449954 FAM47BQ8NA70 645 aa7.04□□□□□ -1.28
LINC01961-201ENST00000449954 OR4K1Q8NGD4 311 aa7.04□□□□□ -1.28
LINC01961-201ENST00000449954 OR14L1PQ8NHC6 308 aa7.04□□□□□ -1.28
LINC01961-201ENST00000449954 SPPL2AQ8TCT8 520 aa7.04□□□□□ -1.28
LINC01961-201ENST00000449954 CTNNBL1Q8WYA6 563 aaPredicted RBP7.04□□□□□ -1.28
LINC01961-201ENST00000449954 FAR2Q96K12 515 aa7.04□□□□□ -1.28
LINC01961-201ENST00000449954 BTBD9Q96Q07 612 aa7.04□□□□□ -1.28
LINC01961-201ENST00000449954 HAUS8Q9BT25 410 aa7.04□□□□□ -1.28
LINC01961-201ENST00000449954 ALOXE3Q9BYJ1 711 aa7.04□□□□□ -1.28
LINC01961-201ENST00000449954 KRTAP17-1Q9BYP8 105 aa7.04□□□□□ -1.28
LINC01961-201ENST00000449954 OR2B2Q9GZK3 357 aa7.04□□□□□ -1.28
LINC01961-201ENST00000449954 ACTR8Q9H981 624 aa7.04□□□□□ -1.28
LINC01961-201ENST00000449954 RNF122Q9H9V4 155 aa7.04□□□□□ -1.28
LINC01961-201ENST00000449954 CBLN4Q9NTU7 201 aa7.04□□□□□ -1.28
LINC01961-201ENST00000449954 WWOXQ9NZC7 414 aa7.04□□□□□ -1.28
LINC01961-201ENST00000449954 HEY2Q9UBP5 337 aa7.04□□□□□ -1.28
LINC01961-201ENST00000449954 ZNF175Q9Y473 711 aa7.04□□□□□ -1.28
LINC01961-201ENST00000449954 PTGDR2Q9Y5Y4 395 aa7.04□□□□□ -1.28
LINC01961-201ENST00000449954 TENM3Q9P273 2699 aa7.03□□□□□ -1.28
LINC01961-201ENST00000449954 LRRC10BA6NIK2 292 aa7.03□□□□□ -1.28
LINC01961-201ENST00000449954 APOC4-APOC2K7ER74 178 aa7.03□□□□□ -1.28
LINC01961-201ENST00000449954 CDC7O00311 574 aa7.03□□□□□ -1.28
LINC01961-201ENST00000449954 NDUFS3O75489 264 aa7.03□□□□□ -1.28
LINC01961-201ENST00000449954 APOC2P02655 101 aa7.03□□□□□ -1.28
LINC01961-201ENST00000449954 SERPINA6P08185 405 aa7.03□□□□□ -1.28
LINC01961-201ENST00000449954 H2AFZP0C0S5 128 aa7.03□□□□□ -1.28
LINC01961-201ENST00000449954 RHOXF2BP0C7M4 288 aa7.03□□□□□ -1.28
LINC01961-201ENST00000449954 FCGR2AP12318 317 aa7.03□□□□□ -1.28
LINC01961-201ENST00000449954 SKILP12757 684 aa7.03□□□□□ -1.28
LINC01961-201ENST00000449954 ZNF23P17027 643 aa7.03□□□□□ -1.28
LINC01961-201ENST00000449954 FMO4P31512 558 aa7.03□□□□□ -1.28
LINC01961-201ENST00000449954 HNF4AP41235 474 aa7.03□□□□□ -1.28
LINC01961-201ENST00000449954 CASP3P42574 277 aa7.03□□□□□ -1.28
LINC01961-201ENST00000449954 PDLIM4P50479 330 aa7.03□□□□□ -1.28
LINC01961-201ENST00000449954 STXBP1P61764 594 aaKnown RBP7.03□□□□□ -1.28
LINC01961-201ENST00000449954 BSPH1Q075Z2 132 aa7.03□□□□□ -1.28
LINC01961-201ENST00000449954 BCL2A1Q16548 175 aa7.03□□□□□ -1.28
LINC01961-201ENST00000449954 ACSBG2Q5FVE4 666 aa7.03□□□□□ -1.28
LINC01961-201ENST00000449954 CTSL3PQ5NE16 218 aa7.03□□□□□ -1.28
LINC01961-201ENST00000449954 BICRALQ6AI39 1079 aa7.03□□□□□ -1.28
LINC01961-201ENST00000449954 ALKBH5Q6P6C2 394 aaKnown RBP7.03□□□□□ -1.28
LINC01961-201ENST00000449954 RINLQ6ZS11 566 aa7.03□□□□□ -1.28
LINC01961-201ENST00000449954 H2AFVQ71UI9 128 aa7.03□□□□□ -1.28
LINC01961-201ENST00000449954 CCDC50Q8IVM0 306 aa7.03□□□□□ -1.28
LINC01961-201ENST00000449954 SNX31Q8N9S9 440 aa7.03□□□□□ -1.28
LINC01961-201ENST00000449954 TMEM52Q8NDY8 209 aa7.03□□□□□ -1.28
LINC01961-201ENST00000449954 STEAP2Q8NFT2 490 aa7.03□□□□□ -1.28
LINC01961-201ENST00000449954 OR6K3Q8NGY3 331 aa7.03□□□□□ -1.28
LINC01961-201ENST00000449954 KCTD4Q8WVF5 259 aa7.03□□□□□ -1.28
LINC01961-201ENST00000449954 GAL3ST3Q96A11 431 aa7.03□□□□□ -1.28
LINC01961-201ENST00000449954 C3orf49Q96BT1 292 aa7.03□□□□□ -1.28
LINC01961-201ENST00000449954 GAL3ST4Q96RP7 486 aa7.03□□□□□ -1.28
LINC01961-201ENST00000449954 PLSCR4Q9NRQ2 329 aa7.03□□□□□ -1.28
LINC01961-201ENST00000449954 SLC2A6Q9UGQ3 507 aa7.03□□□□□ -1.28
LINC01961-201ENST00000449954 EMC9Q9Y3B6 208 aa7.03□□□□□ -1.28
LINC01961-201ENST00000449954 CADP27708 2225 aa7.03□□□□□ -1.28
LINC01961-201ENST00000449954 hCG_1818297A0A087WSY0 165 aa7.02□□□□□ -1.29
LINC01961-201ENST00000449954 IGHV4-61A0A0C4DH41 118 aa7.02□□□□□ -1.29
LINC01961-201ENST00000449954 ESYT3A0FGR9 886 aa7.02□□□□□ -1.29
LINC01961-201ENST00000449954 OR6C76A6NM76 312 aa7.02□□□□□ -1.29
LINC01961-201ENST00000449954 C4orf51C9J302 202 aa7.02□□□□□ -1.29
LINC01961-201ENST00000449954 E5RI56 91 aa7.02□□□□□ -1.29
LINC01961-201ENST00000449954 CYR61O00622 381 aa7.02□□□□□ -1.29
LINC01961-201ENST00000449954 SMAD9O15198 467 aaKnown RBP7.02□□□□□ -1.29
LINC01961-201ENST00000449954 PFDN6O15212 129 aa7.02□□□□□ -1.29
LINC01961-201ENST00000449954 CD3EAPO15446 510 aaKnown RBP7.02□□□□□ -1.29
LINC01961-201ENST00000449954 PSMD3O43242 534 aa7.02□□□□□ -1.29
LINC01961-201ENST00000449954 B3GALT2O43825 422 aa7.02□□□□□ -1.29
LINC01961-201ENST00000449954 SHOX2O60902 331 aaPredicted RBP7.02□□□□□ -1.29
LINC01961-201ENST00000449954 NIPSNAP2O75323 286 aa7.02□□□□□ -1.29
LINC01961-201ENST00000449954 CBR3O75828 277 aa7.02□□□□□ -1.29
LINC01961-201ENST00000449954 ETHE1O95571 254 aa7.02□□□□□ -1.29
LINC01961-201ENST00000449954 ESR1P03372 595 aa7.02□□□□□ -1.29
LINC01961-201ENST00000449954 COL6A2P12110 1019 aa7.02□□□□□ -1.29
LINC01961-201ENST00000449954 ENO3P13929 434 aaPredicted RBP7.02□□□□□ -1.29
LINC01961-201ENST00000449954 EEFSECP57772 596 aaKnown RBP7.02□□□□□ -1.29
LINC01961-201ENST00000449954 BTN3A2P78410 334 aa7.02□□□□□ -1.29
LINC01961-201ENST00000449954 CDH17Q12864 832 aa7.02□□□□□ -1.29
LINC01961-201ENST00000449954 GPS1Q13098 491 aa7.02□□□□□ -1.29
LINC01961-201ENST00000449954 RUNX2Q13950 521 aa7.02□□□□□ -1.29
LINC01961-201ENST00000449954 EBPQ15125 230 aaKnown RBP7.02□□□□□ -1.29
LINC01961-201ENST00000449954 PARP6Q2NL67 630 aa7.02□□□□□ -1.29
LINC01961-201ENST00000449954 TMEM81Q6P7N7 255 aa7.02□□□□□ -1.29
LINC01961-201ENST00000449954 UGT2A3Q6UWM9 527 aa7.02□□□□□ -1.29
LINC01961-201ENST00000449954 ANGPTL8Q6UXH0 198 aa7.02□□□□□ -1.29
LINC01961-201ENST00000449954 STK32CQ86UX6 486 aa7.02□□□□□ -1.29
LINC01961-201ENST00000449954 ZNF540Q8NDQ6 660 aa7.02□□□□□ -1.29
LINC01961-201ENST00000449954 SENP5Q96HI0 755 aaPredicted RBP7.02□□□□□ -1.29
LINC01961-201ENST00000449954 FBXL20Q96IG2 436 aa7.02□□□□□ -1.29
LINC01961-201ENST00000449954 SFXN2Q96NB2 322 aa7.02□□□□□ -1.29
LINC01961-201ENST00000449954 BIRC8Q96P09 236 aa7.02□□□□□ -1.29
LINC01961-201ENST00000449954 HDHD5Q9BXW7 423 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms