RNA–Protein interactions for RNA: ENST00000448872.6

RCL1-208, Transcript of RNA terminal phosphate cyclase like 1, humanhuman

TSL 1 (best) BASIC

Gene RCL1, Length 1,459 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1-208ENST00000448872 NATD1Q8N6N6 113 aa11.01□□□□□ -0.65
RCL1-208ENST00000448872 SIRT6Q8N6T7 355 aa11.01□□□□□ -0.65
RCL1-208ENST00000448872 CLEC1AQ8NC01 280 aa11.01□□□□□ -0.65
RCL1-208ENST00000448872 VPS37AQ8NEZ2 397 aa11.01□□□□□ -0.65
RCL1-208ENST00000448872 C16orf52Q8NHV5 167 aa11.01□□□□□ -0.65
RCL1-208ENST00000448872 PSMA8Q8TAA3 256 aa11.01□□□□□ -0.65
RCL1-208ENST00000448872 M1APQ8TC57 530 aa11.01□□□□□ -0.65
RCL1-208ENST00000448872 BRIX1Q8TDN6 353 aaKnown RBP11.01□□□□□ -0.65
RCL1-208ENST00000448872 PSMF1Q92530 271 aa11.01□□□□□ -0.65
RCL1-208ENST00000448872 OTUB1Q96FW1 271 aaPredicted RBP11.01□□□□□ -0.65
RCL1-208ENST00000448872 VMP1Q96GC9 406 aa11.01□□□□□ -0.65
RCL1-208ENST00000448872 C16orf58Q96GQ5 468 aa11.01□□□□□ -0.65
RCL1-208ENST00000448872 THOC3Q96J01 351 aaKnown RBP11.01□□□□□ -0.65
RCL1-208ENST00000448872 LRRC37BQ96QE4 947 aa11.01□□□□□ -0.65
RCL1-208ENST00000448872 NPAS2Q99743 824 aa11.01□□□□□ -0.65
RCL1-208ENST00000448872 SEMA4CQ9C0C4 833 aa11.01□□□□□ -0.65
RCL1-208ENST00000448872 ATP13A2Q9NQ11 1180 aa11.01□□□□□ -0.65
RCL1-208ENST00000448872 EQTNQ9NQ60 294 aa11.01□□□□□ -0.65
RCL1-208ENST00000448872 MAP10Q9P2G4 905 aa11.01□□□□□ -0.65
RCL1-208ENST00000448872 C19orf53Q9UNZ5 99 aaPredicted RBP11.01□□□□□ -0.65
RCL1-208ENST00000448872 NDUFAF1Q9Y375 327 aa11.01□□□□□ -0.65
RCL1-208ENST00000448872 GIMAP1-GIMAP5A0A087WTJ2 511 aa11□□□□□ -0.65
RCL1-208ENST00000448872 A0A087WV62 115 aa11□□□□□ -0.65
RCL1-208ENST00000448872 TMEM200CA6NKL6 621 aa11□□□□□ -0.65
RCL1-208ENST00000448872 A8MUI8 341 aa11□□□□□ -0.65
RCL1-208ENST00000448872 RFXANKO14593 260 aa11□□□□□ -0.65
RCL1-208ENST00000448872 ANGPT2O15123 496 aa11□□□□□ -0.65
RCL1-208ENST00000448872 SLC22A2O15244 555 aa11□□□□□ -0.65
RCL1-208ENST00000448872 DCTN3O75935 186 aa11□□□□□ -0.65
RCL1-208ENST00000448872 PSMG1O95456 288 aa11□□□□□ -0.65
RCL1-208ENST00000448872 SERPINA7P05543 415 aa11□□□□□ -0.65
RCL1-208ENST00000448872 COX4I1P13073 169 aa11□□□□□ -0.65
RCL1-208ENST00000448872 ITGA3P26006 1051 aa11□□□□□ -0.65
RCL1-208ENST00000448872 ADSLP30566 484 aaPredicted RBP11□□□□□ -0.65
RCL1-208ENST00000448872 EMDP50402 254 aa11□□□□□ -0.65
RCL1-208ENST00000448872 CLCN2P51788 898 aa11□□□□□ -0.65
RCL1-208ENST00000448872 RPS26P62854 115 aaKnown RBP11□□□□□ -0.65
RCL1-208ENST00000448872 AIMP2Q13155 320 aaKnown RBP11□□□□□ -0.65
RCL1-208ENST00000448872 CYLC2Q14093 348 aaPredicted RBP11□□□□□ -0.65
RCL1-208ENST00000448872 NNATQ16517 81 aa11□□□□□ -0.65
RCL1-208ENST00000448872 REP15Q6BDI9 236 aa11□□□□□ -0.65
RCL1-208ENST00000448872 HSDL2Q6YN16 418 aa11□□□□□ -0.65
RCL1-208ENST00000448872 RNF111Q6ZNA4 994 aa11□□□□□ -0.65
RCL1-208ENST00000448872 ZNF621Q6ZSS3 439 aa11□□□□□ -0.65
RCL1-208ENST00000448872 MSANTD1Q6ZTZ1 278 aa11□□□□□ -0.65
RCL1-208ENST00000448872 MSRB3Q8IXL7 192 aa11□□□□□ -0.65
RCL1-208ENST00000448872 TMEM102Q8N9M5 508 aaPredicted RBP11□□□□□ -0.65
RCL1-208ENST00000448872 C7orf57Q8NEG2 295 aa11□□□□□ -0.65
RCL1-208ENST00000448872 NUP43Q8NFH3 380 aa11□□□□□ -0.65
RCL1-208ENST00000448872 OR7G1Q8NGA0 311 aa11□□□□□ -0.65
RCL1-208ENST00000448872 FBXO30Q8TB52 745 aa11□□□□□ -0.65
RCL1-208ENST00000448872 GIMAP5Q96F15 307 aa11□□□□□ -0.65
RCL1-208ENST00000448872 AURKBQ96GD4 344 aaPredicted RBP11□□□□□ -0.65
RCL1-208ENST00000448872 ITCHQ96J02 903 aa11□□□□□ -0.65
RCL1-208ENST00000448872 VPS50Q96JG6 964 aa11□□□□□ -0.65
RCL1-208ENST00000448872 GAL3ST4Q96RP7 486 aa11□□□□□ -0.65
RCL1-208ENST00000448872 YIPF4Q9BSR8 244 aa11□□□□□ -0.65
RCL1-208ENST00000448872 SLC25A23Q9BV35 468 aa11□□□□□ -0.65
RCL1-208ENST00000448872 TRIM8Q9BZR9 551 aa11□□□□□ -0.65
RCL1-208ENST00000448872 PAIP1Q9H074 479 aaKnown RBP11□□□□□ -0.65
RCL1-208ENST00000448872 RMND5AQ9H871 391 aa11□□□□□ -0.65
RCL1-208ENST00000448872 IL1RL2Q9HB29 575 aa11□□□□□ -0.65
RCL1-208ENST00000448872 NEUROD4Q9HD90 331 aa11□□□□□ -0.65
RCL1-208ENST00000448872 ZCCHC3Q9NUD5 404 aaKnown RBP11□□□□□ -0.65
RCL1-208ENST00000448872 ARL8BQ9NVJ2 186 aa11□□□□□ -0.65
RCL1-208ENST00000448872 SLC25A37Q9NYZ2 338 aa11□□□□□ -0.65
RCL1-208ENST00000448872 PTGFRNQ9P2B2 879 aa11□□□□□ -0.65
RCL1-208ENST00000448872 COPS7AQ9UBW8 275 aa11□□□□□ -0.65
RCL1-208ENST00000448872 PCDHGB4Q9UN71 923 aa11□□□□□ -0.65
RCL1-208ENST00000448872 RNF103-CHMP3A0A140T963 221 aa11□□□□□ -0.65
RCL1-208ENST00000448872 EMC8O43402 210 aa11□□□□□ -0.65
RCL1-208ENST00000448872 ICAM2P13598 275 aa11□□□□□ -0.65
RCL1-208ENST00000448872 HOXB9P17482 250 aaPredicted RBP11□□□□□ -0.65
RCL1-208ENST00000448872 CPA2P48052 419 aa11□□□□□ -0.65
RCL1-208ENST00000448872 CCT3P49368 545 aaKnown RBP11□□□□□ -0.65
RCL1-208ENST00000448872 CORO7P57737 925 aa11□□□□□ -0.65
RCL1-208ENST00000448872 RNF4P78317 190 aa11□□□□□ -0.65
RCL1-208ENST00000448872 TP53BP2Q13625 1128 aa11□□□□□ -0.65
RCL1-208ENST00000448872 EBPQ15125 230 aaKnown RBP11□□□□□ -0.65
RCL1-208ENST00000448872 TBR1Q16650 682 aa11□□□□□ -0.65
RCL1-208ENST00000448872 ST3GAL2Q16842 350 aa11□□□□□ -0.65
RCL1-208ENST00000448872 TCTN3Q6NUS6 607 aa11□□□□□ -0.65
RCL1-208ENST00000448872 DLEU7Q6UYE1 221 aa11□□□□□ -0.65
RCL1-208ENST00000448872 GALNT16Q8N428 558 aa11□□□□□ -0.65
RCL1-208ENST00000448872 GOT1L1Q8NHS2 421 aaPredicted RBP11□□□□□ -0.65
RCL1-208ENST00000448872 PNPT1Q8TCS8 783 aaKnown RBP11□□□□□ -0.65
RCL1-208ENST00000448872 EXTL1Q92935 676 aa11□□□□□ -0.65
RCL1-208ENST00000448872 RCN3Q96D15 328 aa11□□□□□ -0.65
RCL1-208ENST00000448872 ART5Q96L15 291 aa11□□□□□ -0.65
RCL1-208ENST00000448872 SLC35A5Q9BS91 424 aa11□□□□□ -0.65
RCL1-208ENST00000448872 ITPAQ9BY32 194 aa11□□□□□ -0.65
RCL1-208ENST00000448872 SERHL2Q9H4I8 314 aa11□□□□□ -0.65
RCL1-208ENST00000448872 FOLH1BQ9HBA9 442 aa11□□□□□ -0.65
RCL1-208ENST00000448872 NTMQ9P121 344 aa11□□□□□ -0.65
RCL1-208ENST00000448872 LEF1Q9UJU2 399 aaPredicted RBP11□□□□□ -0.65
RCL1-208ENST00000448872 VPS4AQ9UN37 437 aa11□□□□□ -0.65
RCL1-208ENST00000448872 PCDHB14Q9Y5E9 798 aa11□□□□□ -0.65
RCL1-208ENST00000448872 HEMK1Q9Y5R4 338 aaPredicted RBP11□□□□□ -0.65
RCL1-208ENST00000448872 WWP2O00308 870 aa10.99□□□□□ -0.65
RCL1-208ENST00000448872 ZNF354AO60765 605 aaPredicted RBP10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms