RNA–Protein interactions for RNA: ENST00000448310.1

CBX4-202, Transcript of chromobox 4, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene CBX4, Length 718 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-202ENST00000448310 BRINP2Q9C0B6 783 aa25.87■■□□□ 1.73
CBX4-202ENST00000448310 CRIM1Q9NZV1 1036 aa25.87■■□□□ 1.73
CBX4-202ENST00000448310 MTRF1LQ9UGC7 380 aaKnown RBP25.87■■□□□ 1.73
CBX4-202ENST00000448310 CES1P1Q9UKY3 287 aa25.87■■□□□ 1.73
CBX4-202ENST00000448310 PCDHA9Q9Y5H5 950 aa25.87■■□□□ 1.73
CBX4-202ENST00000448310 PRRC2AP48634 2157 aaKnown RBP25.87■■□□□ 1.73
CBX4-202ENST00000448310 ERAL1O75616 437 aaKnown RBP25.86■■□□□ 1.73
CBX4-202ENST00000448310 RPS17P08708 135 aaKnown RBP25.86■■□□□ 1.73
CBX4-202ENST00000448310 CEACAM8P31997 349 aaPredicted RBP25.86■■□□□ 1.73
CBX4-202ENST00000448310 FEN1P39748 380 aaKnown RBP25.86■■□□□ 1.73
CBX4-202ENST00000448310 CDH13P55290 713 aa25.86■■□□□ 1.73
CBX4-202ENST00000448310 GGTA1PQ4G0N0 100 aa25.86■■□□□ 1.73
CBX4-202ENST00000448310 SLC48A1Q6P1K1 146 aa25.86■■□□□ 1.73
CBX4-202ENST00000448310 VWA5B2Q8N398 1253 aa25.86■■□□□ 1.73
CBX4-202ENST00000448310 SIMC1Q8NDZ2 872 aa25.86■■□□□ 1.73
CBX4-202ENST00000448310 ITPAQ9BY32 194 aa25.86■■□□□ 1.73
CBX4-202ENST00000448310 POLDIP3Q9BY77 421 aaKnown RBP25.86■■□□□ 1.73
CBX4-202ENST00000448310 LIME1Q9H400 295 aa25.86■■□□□ 1.73
CBX4-202ENST00000448310 BCAP29Q9UHQ4 241 aa25.86■■□□□ 1.73
CBX4-202ENST00000448310 CAMK2AQ9UQM7 478 aa25.86■■□□□ 1.73
CBX4-202ENST00000448310 IKBKGQ9Y6K9 419 aa25.86■■□□□ 1.73
CBX4-202ENST00000448310 HRNRQ86YZ3 2850 aaPredicted RBP25.86■■□□□ 1.73
CBX4-202ENST00000448310 SYT5O00445 386 aa25.85■■□□□ 1.73
CBX4-202ENST00000448310 DVL2O14641 736 aa25.85■■□□□ 1.73
CBX4-202ENST00000448310 PDYNP01213 254 aa25.85■■□□□ 1.73
CBX4-202ENST00000448310 ABCB1P08183 1280 aaPredicted RBP25.85■■□□□ 1.73
CBX4-202ENST00000448310 KRT15P19012 456 aa25.85■■□□□ 1.73
CBX4-202ENST00000448310 RPP38P78345 283 aaKnown RBP25.85■■□□□ 1.73
CBX4-202ENST00000448310 DUSP2Q05923 314 aa25.85■■□□□ 1.73
CBX4-202ENST00000448310 MGAT2Q10469 447 aa25.85■■□□□ 1.73
CBX4-202ENST00000448310 GALNT1Q10472 559 aaPredicted RBP25.85■■□□□ 1.73
CBX4-202ENST00000448310 TSNAXIP1Q2TAA8 658 aa25.85■■□□□ 1.73
CBX4-202ENST00000448310 PRICKLE4Q2TBC4 344 aa25.85■■□□□ 1.73
CBX4-202ENST00000448310 WIPI1Q5MNZ9 446 aaPredicted RBP25.85■■□□□ 1.73
CBX4-202ENST00000448310 DCST1Q5T197 706 aa25.85■■□□□ 1.73
CBX4-202ENST00000448310 C10orf62Q5T681 223 aaPredicted RBP25.85■■□□□ 1.73
CBX4-202ENST00000448310 FAM180BQ6P0A1 224 aa25.85■■□□□ 1.73
CBX4-202ENST00000448310 LETMD1Q6P1Q0 360 aa25.85■■□□□ 1.73
CBX4-202ENST00000448310 RELL1Q8IUW5 271 aa25.85■■□□□ 1.73
CBX4-202ENST00000448310 LACC1Q8IV20 430 aa25.85■■□□□ 1.73
CBX4-202ENST00000448310 C17orf47Q8NEP4 570 aa25.85■■□□□ 1.73
CBX4-202ENST00000448310 ADCY4Q8NFM4 1077 aa25.85■■□□□ 1.73
CBX4-202ENST00000448310 UHMK1Q8TAS1 419 aaKnown RBP25.85■■□□□ 1.73
CBX4-202ENST00000448310 SELENOMQ8WWX9 145 aa25.85■■□□□ 1.73
CBX4-202ENST00000448310 HBEGFQ99075 208 aa25.85■■□□□ 1.73
CBX4-202ENST00000448310 SH3GL2Q99962 352 aa25.85■■□□□ 1.73
CBX4-202ENST00000448310 PRDM14Q9GZV8 571 aa25.85■■□□□ 1.73
CBX4-202ENST00000448310 MAT2BQ9NZL9 334 aa25.85■■□□□ 1.73
CBX4-202ENST00000448310 C1orf226A1L170 272 aa25.84■■□□□ 1.73
CBX4-202ENST00000448310 POC1B-GALNT4F8VUJ3 575 aa25.84■■□□□ 1.73
CBX4-202ENST00000448310 BMP7P18075 431 aa25.84■■□□□ 1.73
CBX4-202ENST00000448310 DEKP35659 375 aaKnown RBP25.84■■□□□ 1.73
CBX4-202ENST00000448310 SERPINB9P50453 376 aa25.84■■□□□ 1.73
CBX4-202ENST00000448310 ASCL1P50553 236 aa25.84■■□□□ 1.73
CBX4-202ENST00000448310 VASNQ6EMK4 673 aa25.84■■□□□ 1.73
CBX4-202ENST00000448310 POMZP3Q6PJE2 187 aa25.84■■□□□ 1.73
CBX4-202ENST00000448310 ZNF483Q8TF39 744 aaPredicted RBP25.84■■□□□ 1.73
CBX4-202ENST00000448310 TM4SF18Q96CE8 201 aa25.84■■□□□ 1.73
CBX4-202ENST00000448310 TMEM41AQ96HV5 264 aa25.84■■□□□ 1.73
CBX4-202ENST00000448310 UGT2B28Q9BY64 529 aa25.84■■□□□ 1.73
CBX4-202ENST00000448310 METTL7AQ9H8H3 244 aa25.84■■□□□ 1.73
CBX4-202ENST00000448310 DMGDHQ9UI17 866 aaKnown RBP25.84■■□□□ 1.73
CBX4-202ENST00000448310 C2orf72A6NCS6 295 aa25.83■■□□□ 1.73
CBX4-202ENST00000448310 GOLGA6L10A6NI86 522 aa25.83■■□□□ 1.73
CBX4-202ENST00000448310 TRIM49D1C9J1S8 452 aa25.83■■□□□ 1.73
CBX4-202ENST00000448310 PPM1BO75688 479 aa25.83■■□□□ 1.73
CBX4-202ENST00000448310 SBK3P0C264 359 aa25.83■■□□□ 1.73
CBX4-202ENST00000448310 PTPN6P29350 595 aa25.83■■□□□ 1.73
CBX4-202ENST00000448310 TIMP3P35625 211 aa25.83■■□□□ 1.73
CBX4-202ENST00000448310 SOX18P35713 384 aa25.83■■□□□ 1.73
CBX4-202ENST00000448310 ZNF136P52737 540 aa25.83■■□□□ 1.73
CBX4-202ENST00000448310 TIGD3Q6B0B8 471 aa25.83■■□□□ 1.73
CBX4-202ENST00000448310 ANGPTL8Q6UXH0 198 aa25.83■■□□□ 1.73
CBX4-202ENST00000448310 TAOK1Q7L7X3 1001 aa25.83■■□□□ 1.73
CBX4-202ENST00000448310 PM20D2Q8IYS1 436 aa25.83■■□□□ 1.73
CBX4-202ENST00000448310 TRPC4APQ8TEL6 797 aa25.83■■□□□ 1.73
CBX4-202ENST00000448310 RNASE6Q93091 150 aaKnown RBP25.83■■□□□ 1.73
CBX4-202ENST00000448310 KLHL29Q96CT2 875 aa25.83■■□□□ 1.73
CBX4-202ENST00000448310 NTNG2Q96CW9 530 aa25.83■■□□□ 1.73
CBX4-202ENST00000448310 TRIB1Q96RU8 372 aa25.83■■□□□ 1.73
CBX4-202ENST00000448310 NODALQ96S42 347 aa25.83■■□□□ 1.73
CBX4-202ENST00000448310 MRPL57Q9BQC6 102 aaKnown RBP25.83■■□□□ 1.73
CBX4-202ENST00000448310 MRPL46Q9H2W6 279 aaKnown RBP25.83■■□□□ 1.73
CBX4-202ENST00000448310 CCM2LQ9NUG4 571 aaPredicted RBP25.83■■□□□ 1.73
CBX4-202ENST00000448310 EHD3Q9NZN3 535 aa25.83■■□□□ 1.73
CBX4-202ENST00000448310 MAP1AP78559 2803 aaPredicted RBP25.83■■□□□ 1.73
CBX4-202ENST00000448310 A8MT66 165 aa25.82■■□□□ 1.72
CBX4-202ENST00000448310 GUCY1B2O75343 617 aa25.82■■□□□ 1.72
CBX4-202ENST00000448310 KRT38O76015 456 aa25.82■■□□□ 1.72
CBX4-202ENST00000448310 OTCP00480 354 aa25.82■■□□□ 1.72
CBX4-202ENST00000448310 IL2RAP01589 272 aa25.82■■□□□ 1.72
CBX4-202ENST00000448310 COL6A2P12110 1019 aa25.82■■□□□ 1.72
CBX4-202ENST00000448310 AGFG1P52594 562 aaKnown RBP25.82■■□□□ 1.72
CBX4-202ENST00000448310 MAP4K2Q12851 820 aa25.82■■□□□ 1.72
CBX4-202ENST00000448310 LTB4RQ15722 352 aa25.82■■□□□ 1.72
CBX4-202ENST00000448310 TCHHL1Q5QJ38 904 aaPredicted RBP25.82■■□□□ 1.72
CBX4-202ENST00000448310 NSUN5P2Q63ZY6 315 aa25.82■■□□□ 1.72
CBX4-202ENST00000448310 YRDCQ86U90 279 aaKnown RBP25.82■■□□□ 1.72
CBX4-202ENST00000448310 OR1J4Q8NGS1 313 aa25.82■■□□□ 1.72
CBX4-202ENST00000448310 DCAKDQ8WVC6 231 aa25.82■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms