RNA–Protein interactions for RNA: ENST00000448238.2

NIPBL-202, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 1 (best) BASIC

Gene NIPBL, Length 8,729 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-202ENST00000448238 HLA-DMAP28067 261 aa8.58□□□□□ -1.04
NIPBL-202ENST00000448238 PRDX3P30048 256 aaKnown RBP8.58□□□□□ -1.04
NIPBL-202ENST00000448238 RAP2BP61225 183 aa8.58□□□□□ -1.04
NIPBL-202ENST00000448238 H3F3AP84243 136 aa8.58□□□□□ -1.04
NIPBL-202ENST00000448238 TEX44Q53QW1 395 aa8.58□□□□□ -1.04
NIPBL-202ENST00000448238 HACD4Q5VWC8 232 aa8.58□□□□□ -1.04
NIPBL-202ENST00000448238 ZNF662Q6ZS27 426 aa8.58□□□□□ -1.04
NIPBL-202ENST00000448238 ZNF100Q8IYN0 542 aa8.58□□□□□ -1.04
NIPBL-202ENST00000448238 C10orf90Q96M02 699 aa8.58□□□□□ -1.04
NIPBL-202ENST00000448238 SAP130Q9H0E3 1048 aa8.58□□□□□ -1.04
NIPBL-202ENST00000448238 KCTD3Q9Y597 815 aa8.58□□□□□ -1.04
NIPBL-202ENST00000448238 CEP250Q9BV73 2442 aa8.58□□□□□ -1.04
NIPBL-202ENST00000448238 CCKARP32238 428 aa8.58□□□□□ -1.04
NIPBL-202ENST00000448238 YIF1BQ5BJH7 314 aa8.58□□□□□ -1.04
NIPBL-202ENST00000448238 LMNTD1Q8N9Z9 388 aa8.58□□□□□ -1.04
NIPBL-202ENST00000448238 RPL10LQ96L21 214 aaKnown RBP8.58□□□□□ -1.04
NIPBL-202ENST00000448238 PINK1Q9BXM7 581 aa8.58□□□□□ -1.04
NIPBL-202ENST00000448238 WDR55Q9H6Y2 383 aaPredicted RBP8.58□□□□□ -1.04
NIPBL-202ENST00000448238 NMUR1Q9HB89 426 aa8.58□□□□□ -1.04
NIPBL-202ENST00000448238 LOXHD1Q8IVV2 1947 aa8.57□□□□□ -1.04
NIPBL-202ENST00000448238 POLR1AO95602 1720 aaPredicted RBP8.57□□□□□ -1.04
NIPBL-202ENST00000448238 CEBPZOSA8MTT3 80 aa8.57□□□□□ -1.04
NIPBL-202ENST00000448238 ZNF17P17021 662 aa8.57□□□□□ -1.04
NIPBL-202ENST00000448238 RPS12P25398 132 aaKnown RBP8.57□□□□□ -1.04
NIPBL-202ENST00000448238 OAZ1P54368 228 aa8.57□□□□□ -1.04
NIPBL-202ENST00000448238 YBEYP58557 167 aaPredicted RBP8.57□□□□□ -1.04
NIPBL-202ENST00000448238 ZNF266Q14584 549 aa8.57□□□□□ -1.04
NIPBL-202ENST00000448238 TGFBIQ15582 683 aa8.57□□□□□ -1.04
NIPBL-202ENST00000448238 PLCXD3Q63HM9 321 aa8.57□□□□□ -1.04
NIPBL-202ENST00000448238 FKBP10Q96AY3 582 aa8.57□□□□□ -1.04
NIPBL-202ENST00000448238 ZNF587Q96SQ5 575 aaPredicted RBP8.57□□□□□ -1.04
NIPBL-202ENST00000448238 HRH4Q9H3N8 390 aa8.57□□□□□ -1.04
NIPBL-202ENST00000448238 DZANK1Q9NVP4 752 aa8.57□□□□□ -1.04
NIPBL-202ENST00000448238 CNTN3Q9P232 1028 aa8.57□□□□□ -1.04
NIPBL-202ENST00000448238 CNTN6Q9UQ52 1028 aa8.57□□□□□ -1.04
NIPBL-202ENST00000448238 MYPNQ86TC9 1320 aa8.57□□□□□ -1.04
NIPBL-202ENST00000448238 CFAP74Q9C0B2 1584 aa8.57□□□□□ -1.04
NIPBL-202ENST00000448238 A0A1W2PPK0 400 aa8.57□□□□□ -1.04
NIPBL-202ENST00000448238 RGL2O15211 777 aa8.57□□□□□ -1.04
NIPBL-202ENST00000448238 ECI2O75521 394 aa8.57□□□□□ -1.04
NIPBL-202ENST00000448238 MT-ND4P03905 459 aa8.57□□□□□ -1.04
NIPBL-202ENST00000448238 ARAFP10398 606 aa8.57□□□□□ -1.04
NIPBL-202ENST00000448238 PLA2G7Q13093 441 aa8.57□□□□□ -1.04
NIPBL-202ENST00000448238 CCINQ13939 588 aa8.57□□□□□ -1.04
NIPBL-202ENST00000448238 FAM69BQ5VUD6 431 aa8.57□□□□□ -1.04
NIPBL-202ENST00000448238 ENPP7Q6UWV6 458 aa8.57□□□□□ -1.04
NIPBL-202ENST00000448238 SLC35D2Q76EJ3 337 aa8.57□□□□□ -1.04
NIPBL-202ENST00000448238 OR2J1Q9GZK6 312 aa8.57□□□□□ -1.04
NIPBL-202ENST00000448238 FAM120CQ9NX05 1096 aaKnown RBP8.57□□□□□ -1.04
NIPBL-202ENST00000448238 TMEM181Q9P2C4 612 aa8.57□□□□□ -1.04
NIPBL-202ENST00000448238 TRBC2A0A5B9 178 aa8.57□□□□□ -1.04
NIPBL-202ENST00000448238 CAPN15O75808 1086 aa8.57□□□□□ -1.04
NIPBL-202ENST00000448238 STAG3L3P0CL85 134 aa8.57□□□□□ -1.04
NIPBL-202ENST00000448238 MAP2K4P45985 399 aa8.57□□□□□ -1.04
NIPBL-202ENST00000448238 AGFG1P52594 562 aaKnown RBP8.57□□□□□ -1.04
NIPBL-202ENST00000448238 ACY1Q03154 408 aa8.57□□□□□ -1.04
NIPBL-202ENST00000448238 EPHA10Q5JZY3 1008 aa8.57□□□□□ -1.04
NIPBL-202ENST00000448238 CTSL3PQ5NE16 218 aa8.57□□□□□ -1.04
NIPBL-202ENST00000448238 TMEM150AQ86TG1 271 aa8.57□□□□□ -1.04
NIPBL-202ENST00000448238 ZNF546Q86UE3 836 aa8.57□□□□□ -1.04
NIPBL-202ENST00000448238 ZNF440Q8IYI8 595 aa8.57□□□□□ -1.04
NIPBL-202ENST00000448238 FBXW5Q969U6 566 aa8.57□□□□□ -1.04
NIPBL-202ENST00000448238 TRMT61BQ9BVS5 477 aaKnown RBP8.57□□□□□ -1.04
NIPBL-202ENST00000448238 ADGRL3Q9HAR2 1447 aa8.57□□□□□ -1.04
NIPBL-202ENST00000448238 NIT2Q9NQR4 276 aa8.57□□□□□ -1.04
NIPBL-202ENST00000448238 FETUBQ9UGM5 382 aa8.57□□□□□ -1.04
NIPBL-202ENST00000448238 ARL2-SNX15V9GYD0 113 aa8.57□□□□□ -1.04
NIPBL-202ENST00000448238 PI4KAP42356 2102 aa8.57□□□□□ -1.04
NIPBL-202ENST00000448238 CEMIPQ8WUJ3 1361 aa8.57□□□□□ -1.04
NIPBL-202ENST00000448238 FAM24AA6NFZ4 105 aa8.57□□□□□ -1.04
NIPBL-202ENST00000448238 POP4O95707 220 aaKnown RBP8.57□□□□□ -1.04
NIPBL-202ENST00000448238 MTPNP58546 118 aa8.57□□□□□ -1.04
NIPBL-202ENST00000448238 BTN1A1Q13410 526 aa8.57□□□□□ -1.04
NIPBL-202ENST00000448238 CAMK2BQ13554 666 aa8.57□□□□□ -1.04
NIPBL-202ENST00000448238 SLC25A52Q3SY17 297 aa8.57□□□□□ -1.04
NIPBL-202ENST00000448238 LIPKQ5VXJ0 399 aa8.57□□□□□ -1.04
NIPBL-202ENST00000448238 LRFN4Q6PJG9 635 aa8.57□□□□□ -1.04
NIPBL-202ENST00000448238 VITQ6UXI7 678 aa8.57□□□□□ -1.04
NIPBL-202ENST00000448238 ABHD12BQ7Z5M8 362 aaPredicted RBP8.57□□□□□ -1.04
NIPBL-202ENST00000448238 DEFB128Q7Z7B8 93 aa8.57□□□□□ -1.04
NIPBL-202ENST00000448238 SCML4Q8N228 414 aa8.57□□□□□ -1.04
NIPBL-202ENST00000448238 TPPP3Q9BW30 176 aa8.57□□□□□ -1.04
NIPBL-202ENST00000448238 TMPRSS4Q9NRS4 437 aa8.57□□□□□ -1.04
NIPBL-202ENST00000448238 SERTAD3Q9UJW9 196 aa8.57□□□□□ -1.04
NIPBL-202ENST00000448238 ABCA8O94911 1581 aa8.57□□□□□ -1.04
NIPBL-202ENST00000448238 CADP27708 2225 aa8.57□□□□□ -1.04
NIPBL-202ENST00000448238 PCCBP05166 539 aa8.57□□□□□ -1.04
NIPBL-202ENST00000448238 DTYMKP23919 212 aa8.57□□□□□ -1.04
NIPBL-202ENST00000448238 CDK5Q00535 292 aa8.57□□□□□ -1.04
NIPBL-202ENST00000448238 TBCEQ15813 527 aaPredicted RBP8.57□□□□□ -1.04
NIPBL-202ENST00000448238 IQCJQ1A5X6 159 aa8.57□□□□□ -1.04
NIPBL-202ENST00000448238 ZNF630Q2M218 657 aaPredicted RBP8.57□□□□□ -1.04
NIPBL-202ENST00000448238 HHIPL2Q6UWX4 724 aa8.57□□□□□ -1.04
NIPBL-202ENST00000448238 FAM185AQ8N0U4 392 aa8.57□□□□□ -1.04
NIPBL-202ENST00000448238 ACBD7Q8N6N7 88 aa8.57□□□□□ -1.04
NIPBL-202ENST00000448238 TSTD1Q8NFU3 115 aa8.57□□□□□ -1.04
NIPBL-202ENST00000448238 OR14C36Q8NHC7 312 aa8.57□□□□□ -1.04
NIPBL-202ENST00000448238 SFXN5Q8TD22 340 aa8.57□□□□□ -1.04
NIPBL-202ENST00000448238 LRRN4Q8WUT4 740 aa8.57□□□□□ -1.04
NIPBL-202ENST00000448238 ZCCHC4Q9H5U6 513 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms