RNA–Protein interactions for RNA: ENST00000444440.1

SF3A1-203, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 5

Gene SF3A1, Length 777 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-203ENST00000444440 CCDC151A5D8V7 595 aa9.98□□□□□ -0.81
SF3A1-203ENST00000444440 KDM4EB2RXH2 506 aaPredicted RBP9.98□□□□□ -0.81
SF3A1-203ENST00000444440 ACOT7O00154 380 aa9.98□□□□□ -0.81
SF3A1-203ENST00000444440 COPEO14579 308 aa9.98□□□□□ -0.81
SF3A1-203ENST00000444440 PCDH7O60245 1069 aa9.98□□□□□ -0.81
SF3A1-203ENST00000444440 PLIN3O60664 434 aa9.98□□□□□ -0.81
SF3A1-203ENST00000444440 TRIM3O75382 744 aaPredicted RBP9.98□□□□□ -0.81
SF3A1-203ENST00000444440 ESRRBO95718 433 aa9.98□□□□□ -0.81
SF3A1-203ENST00000444440 KRT6AP02538 564 aa9.98□□□□□ -0.81
SF3A1-203ENST00000444440 KRT6BP04259 564 aa9.98□□□□□ -0.81
SF3A1-203ENST00000444440 ATP1B1P05026 303 aa9.98□□□□□ -0.81
SF3A1-203ENST00000444440 MYL2P10916 166 aa9.98□□□□□ -0.81
SF3A1-203ENST00000444440 PCSK2P16519 638 aa9.98□□□□□ -0.81
SF3A1-203ENST00000444440 SERPINB3P29508 390 aa9.98□□□□□ -0.81
SF3A1-203ENST00000444440 HMOX2P30519 316 aa9.98□□□□□ -0.81
SF3A1-203ENST00000444440 KRT6CP48668 564 aa9.98□□□□□ -0.81
SF3A1-203ENST00000444440 ALDH9A1P49189 494 aa9.98□□□□□ -0.81
SF3A1-203ENST00000444440 EMDP50402 254 aa9.98□□□□□ -0.81
SF3A1-203ENST00000444440 SMSP52788 366 aa9.98□□□□□ -0.81
SF3A1-203ENST00000444440 NUP107P57740 925 aa9.98□□□□□ -0.81
SF3A1-203ENST00000444440 BTKQ06187 659 aa9.98□□□□□ -0.81
SF3A1-203ENST00000444440 MAP4K2Q12851 820 aa9.98□□□□□ -0.81
SF3A1-203ENST00000444440 CSTF3Q12996 717 aaKnown RBP9.98□□□□□ -0.81
SF3A1-203ENST00000444440 ERCC6LQ2NKX8 1250 aa9.98□□□□□ -0.81
SF3A1-203ENST00000444440 GXYLT1Q4G148 440 aa9.98□□□□□ -0.81
SF3A1-203ENST00000444440 FRMD7Q6ZUT3 714 aa9.98□□□□□ -0.81
SF3A1-203ENST00000444440 CCDC71Q8IV32 467 aaPredicted RBP9.98□□□□□ -0.81
SF3A1-203ENST00000444440 ZNF295-AS1Q8N0V1 137 aa9.98□□□□□ -0.81
SF3A1-203ENST00000444440 C4orf33Q8N1A6 199 aa9.98□□□□□ -0.81
SF3A1-203ENST00000444440 LRRC25Q8N386 305 aaPredicted RBP9.98□□□□□ -0.81
SF3A1-203ENST00000444440 VWA5B2Q8N398 1253 aa9.98□□□□□ -0.81
SF3A1-203ENST00000444440 CCNYL1Q8N7R7 359 aa9.98□□□□□ -0.81
SF3A1-203ENST00000444440 AENQ8WTP8 325 aaKnown RBP9.98□□□□□ -0.81
SF3A1-203ENST00000444440 C16orf78Q8WTQ4 265 aa9.98□□□□□ -0.81
SF3A1-203ENST00000444440 CAVIN3Q969G5 261 aa9.98□□□□□ -0.81
SF3A1-203ENST00000444440 SDCCAG3Q96C92 435 aa9.98□□□□□ -0.81
SF3A1-203ENST00000444440 SMC6Q96SB8 1091 aa9.98□□□□□ -0.81
SF3A1-203ENST00000444440 ITPAQ9BY32 194 aa9.98□□□□□ -0.81
SF3A1-203ENST00000444440 PARD6BQ9BYG5 372 aa9.98□□□□□ -0.81
SF3A1-203ENST00000444440 SHCBP1LQ9BZQ2 653 aa9.98□□□□□ -0.81
SF3A1-203ENST00000444440 TRIM8Q9BZR9 551 aa9.98□□□□□ -0.81
SF3A1-203ENST00000444440 MID1IP1Q9NPA3 183 aa9.98□□□□□ -0.81
SF3A1-203ENST00000444440 SDAD1Q9NVU7 687 aaKnown RBP eCLIP9.98□□□□□ -0.81
SF3A1-203ENST00000444440 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.98□□□□□ -0.81
SF3A1-203ENST00000444440 MCM8Q9UJA3 840 aa9.98□□□□□ -0.81
SF3A1-203ENST00000444440 RNF6Q9Y252 685 aa9.98□□□□□ -0.81
SF3A1-203ENST00000444440 DLGAP4Q9Y2H0 992 aa9.98□□□□□ -0.81
SF3A1-203ENST00000444440 PLLPQ9Y342 182 aa9.98□□□□□ -0.81
SF3A1-203ENST00000444440 NPFFR2Q9Y5X5 522 aa9.98□□□□□ -0.81
SF3A1-203ENST00000444440 PTGDR2Q9Y5Y4 395 aa9.98□□□□□ -0.81
SF3A1-203ENST00000444440 V9GYY5 206 aaPredicted RBP9.98□□□□□ -0.81
SF3A1-203ENST00000444440 OTOGQ6ZRI0 2925 aa9.97□□□□□ -0.81
SF3A1-203ENST00000444440 NKX2-6A6NCS4 301 aa9.97□□□□□ -0.81
SF3A1-203ENST00000444440 ULK1O75385 1050 aa9.97□□□□□ -0.81
SF3A1-203ENST00000444440 ENO1P06733 434 aaKnown RBP9.97□□□□□ -0.81
SF3A1-203ENST00000444440 NUDT17P0C025 328 aa9.97□□□□□ -0.81
SF3A1-203ENST00000444440 HSD3B1P14060 373 aa9.97□□□□□ -0.81
SF3A1-203ENST00000444440 KRT4P19013 534 aa9.97□□□□□ -0.81
SF3A1-203ENST00000444440 HSD3B2P26439 372 aa9.97□□□□□ -0.81
SF3A1-203ENST00000444440 ABCD3P28288 659 aa9.97□□□□□ -0.81
SF3A1-203ENST00000444440 TIA1P31483 386 aaKnown RBP eCLIP9.97□□□□□ -0.81
SF3A1-203ENST00000444440 PTGDSP41222 190 aa9.97□□□□□ -0.81
SF3A1-203ENST00000444440 TRPC1P48995 793 aa9.97□□□□□ -0.81
SF3A1-203ENST00000444440 NAGLUP54802 743 aa9.97□□□□□ -0.81
SF3A1-203ENST00000444440 PKNOX1P55347 436 aa9.97□□□□□ -0.81
SF3A1-203ENST00000444440 TRA2BP62995 288 aaKnown RBP9.97□□□□□ -0.81
SF3A1-203ENST00000444440 KCNJ2P63252 427 aa9.97□□□□□ -0.81
SF3A1-203ENST00000444440 TFF3Q07654 80 aa9.97□□□□□ -0.81
SF3A1-203ENST00000444440 PCLAFQ15004 111 aa9.97□□□□□ -0.81
SF3A1-203ENST00000444440 RPS6KA2Q15349 733 aa9.97□□□□□ -0.81
SF3A1-203ENST00000444440 ZNF628Q5EBL2 1059 aa9.97□□□□□ -0.81
SF3A1-203ENST00000444440 RGS9BPQ6ZS82 235 aa9.97□□□□□ -0.81
SF3A1-203ENST00000444440 CCDC116Q8IYX3 515 aa9.97□□□□□ -0.81
SF3A1-203ENST00000444440 CCDC63Q8NA47 563 aa9.97□□□□□ -0.81
SF3A1-203ENST00000444440 ACBD4Q8NC06 268 aa9.97□□□□□ -0.81
SF3A1-203ENST00000444440 OR7G1Q8NGA0 311 aa9.97□□□□□ -0.81
SF3A1-203ENST00000444440 OR52R1Q8NGF1 315 aa9.97□□□□□ -0.81
SF3A1-203ENST00000444440 OR9A2Q8NGT5 310 aa9.97□□□□□ -0.81
SF3A1-203ENST00000444440 RDH11Q8TC12 318 aa9.97□□□□□ -0.81
SF3A1-203ENST00000444440 SPPL2AQ8TCT8 520 aa9.97□□□□□ -0.81
SF3A1-203ENST00000444440 KAT2AQ92830 837 aa9.97□□□□□ -0.81
SF3A1-203ENST00000444440 TP53INP1Q96A56 240 aa9.97□□□□□ -0.81
SF3A1-203ENST00000444440 EXOSC8Q96B26 276 aaKnown RBP9.97□□□□□ -0.81
SF3A1-203ENST00000444440 JSRP1Q96MG2 331 aaPredicted RBP9.97□□□□□ -0.81
SF3A1-203ENST00000444440 NODALQ96S42 347 aa9.97□□□□□ -0.81
SF3A1-203ENST00000444440 DOHHQ9BU89 302 aa9.97□□□□□ -0.81
SF3A1-203ENST00000444440 UCK2Q9BZX2 261 aa9.97□□□□□ -0.81
SF3A1-203ENST00000444440 IQCGQ9H095 443 aaKnown RBP9.97□□□□□ -0.81
SF3A1-203ENST00000444440 TP63Q9H3D4 680 aaPredicted RBP9.97□□□□□ -0.81
SF3A1-203ENST00000444440 ZFP64Q9NPA5 681 aa9.97□□□□□ -0.81
SF3A1-203ENST00000444440 NPDC1Q9NQX5 325 aaPredicted RBP9.97□□□□□ -0.81
SF3A1-203ENST00000444440 EHD3Q9NZN3 535 aa9.97□□□□□ -0.81
SF3A1-203ENST00000444440 BCAP29Q9UHQ4 241 aa9.97□□□□□ -0.81
SF3A1-203ENST00000444440 MID2Q9UJV3 735 aa9.97□□□□□ -0.81
SF3A1-203ENST00000444440 UTS2RQ9UKP6 389 aa9.97□□□□□ -0.81
SF3A1-203ENST00000444440 EXO1Q9UQ84 846 aaKnown RBP9.97□□□□□ -0.81
SF3A1-203ENST00000444440 HRNRQ86YZ3 2850 aaPredicted RBP9.97□□□□□ -0.81
SF3A1-203ENST00000444440 MPDZO75970 2070 aa9.96□□□□□ -0.81
SF3A1-203ENST00000444440 SERTM1A2A2V5 107 aa9.96□□□□□ -0.82
SF3A1-203ENST00000444440 C2orf72A6NCS6 295 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 131.7 ms