RNA–Protein interactions for RNA: ENST00000442201.6

CCDC39-201, Transcript of coiled-coil domain containing 39, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC39, Length 3,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-201ENST00000442201 NEUROD4Q9HD90 331 aa7.62□□□□□ -1.19
CCDC39-201ENST00000442201 SLC35C2Q9NQQ7 365 aa7.62□□□□□ -1.19
CCDC39-201ENST00000442201 STARD5Q9NSY2 213 aa7.62□□□□□ -1.19
CCDC39-201ENST00000442201 MS4A12Q9NXJ0 267 aa7.62□□□□□ -1.19
CCDC39-201ENST00000442201 MAGEL2Q9UJ55 1249 aa7.62□□□□□ -1.19
CCDC39-201ENST00000442201 PSME2Q9UL46 239 aa7.62□□□□□ -1.19
CCDC39-201ENST00000442201 RAB23Q9ULC3 237 aa7.62□□□□□ -1.19
CCDC39-201ENST00000442201 MKL2Q9ULH7 1088 aa7.62□□□□□ -1.19
CCDC39-201ENST00000442201 CORO2BQ9UQ03 480 aa7.62□□□□□ -1.19
CCDC39-201ENST00000442201 MRPS2Q9Y399 296 aaKnown RBP7.62□□□□□ -1.19
CCDC39-201ENST00000442201 ELOVL7A1L3X0 281 aa7.61□□□□□ -1.19
CCDC39-201ENST00000442201 GLOD5A6NK44 160 aa7.61□□□□□ -1.19
CCDC39-201ENST00000442201 AQP12BA6NM10 295 aa7.61□□□□□ -1.19
CCDC39-201ENST00000442201 SULT1B1O43704 296 aa7.61□□□□□ -1.19
CCDC39-201ENST00000442201 DYRK3O43781 588 aa7.61□□□□□ -1.19
CCDC39-201ENST00000442201 PCDHGA12O60330 932 aa7.61□□□□□ -1.19
CCDC39-201ENST00000442201 NR2F6P10588 404 aa7.61□□□□□ -1.19
CCDC39-201ENST00000442201 GPX2P18283 190 aa7.61□□□□□ -1.19
CCDC39-201ENST00000442201 ITIH1P19827 911 aa7.61□□□□□ -1.19
CCDC39-201ENST00000442201 CPN2P22792 545 aa7.61□□□□□ -1.19
CCDC39-201ENST00000442201 NTSP30990 170 aa7.61□□□□□ -1.19
CCDC39-201ENST00000442201 TLX1P31314 330 aaPredicted RBP7.61□□□□□ -1.19
CCDC39-201ENST00000442201 SKP1P63208 163 aa7.61□□□□□ -1.19
CCDC39-201ENST00000442201 RHDQ02161 417 aa7.61□□□□□ -1.19
CCDC39-201ENST00000442201 SNTA1Q13424 505 aa7.61□□□□□ -1.19
CCDC39-201ENST00000442201 GAB1Q13480 694 aa7.61□□□□□ -1.19
CCDC39-201ENST00000442201 NDUFA9Q16795 377 aa7.61□□□□□ -1.19
CCDC39-201ENST00000442201 PRTGQ2VWP7 1150 aa7.61□□□□□ -1.19
CCDC39-201ENST00000442201 TCTE1Q5JU00 501 aa7.61□□□□□ -1.19
CCDC39-201ENST00000442201 C18orf63Q68DL7 685 aa7.61□□□□□ -1.19
CCDC39-201ENST00000442201 FAM180BQ6P0A1 224 aa7.61□□□□□ -1.19
CCDC39-201ENST00000442201 SLC48A1Q6P1K1 146 aa7.61□□□□□ -1.19
CCDC39-201ENST00000442201 GUSBP11Q6P575 273 aa7.61□□□□□ -1.19
CCDC39-201ENST00000442201 WDR74Q6RFH5 385 aaPredicted RBP7.61□□□□□ -1.19
CCDC39-201ENST00000442201 ZNF704Q6ZNC4 412 aaPredicted RBP7.61□□□□□ -1.19
CCDC39-201ENST00000442201 PROSER1Q86XN7 944 aa7.61□□□□□ -1.19
CCDC39-201ENST00000442201 AQP12AQ8IXF9 295 aa7.61□□□□□ -1.19
CCDC39-201ENST00000442201 GRPEL2Q8TAA5 225 aa7.61□□□□□ -1.19
CCDC39-201ENST00000442201 BBS4Q96RK4 519 aa7.61□□□□□ -1.19
CCDC39-201ENST00000442201 ARRDC1-AS1Q9H2J1 176 aa7.61□□□□□ -1.19
CCDC39-201ENST00000442201 SLA2Q9H6Q3 261 aa7.61□□□□□ -1.19
CCDC39-201ENST00000442201 NARFLQ9H6Q4 476 aa7.61□□□□□ -1.19
CCDC39-201ENST00000442201 CPNE5Q9HCH3 593 aa7.61□□□□□ -1.19
CCDC39-201ENST00000442201 ANKHQ9HCJ1 492 aa7.61□□□□□ -1.19
CCDC39-201ENST00000442201 ACSS1Q9NUB1 689 aaPredicted RBP7.61□□□□□ -1.19
CCDC39-201ENST00000442201 GIMAP4Q9NUV9 329 aa7.61□□□□□ -1.19
CCDC39-201ENST00000442201 DAPP1Q9UN19 280 aa7.61□□□□□ -1.19
CCDC39-201ENST00000442201 USP22Q9UPT9 525 aa7.61□□□□□ -1.19
CCDC39-201ENST00000442201 PCDHGA5Q9Y5G8 931 aa7.61□□□□□ -1.19
CCDC39-201ENST00000442201 SPACA6W5XKT8 324 aa7.61□□□□□ -1.19
CCDC39-201ENST00000442201 SNRNP200O75643 2136 aaKnown RBP7.61□□□□□ -1.19
CCDC39-201ENST00000442201 MN1Q10571 1320 aaPredicted RBP7.61□□□□□ -1.19
CCDC39-201ENST00000442201 ZNF860A6NHJ4 632 aa7.61□□□□□ -1.19
CCDC39-201ENST00000442201 PGRMC2O15173 223 aa7.61□□□□□ -1.19
CCDC39-201ENST00000442201 GSTA4O15217 222 aa7.61□□□□□ -1.19
CCDC39-201ENST00000442201 GALR3O60755 368 aaPredicted RBP7.61□□□□□ -1.19
CCDC39-201ENST00000442201 PRKRAO75569 313 aaKnown RBP7.61□□□□□ -1.19
CCDC39-201ENST00000442201 ERAL1O75616 437 aaKnown RBP7.61□□□□□ -1.19
CCDC39-201ENST00000442201 NTRK1P04629 796 aa7.61□□□□□ -1.19
CCDC39-201ENST00000442201 RETP07949 1114 aa7.61□□□□□ -1.19
CCDC39-201ENST00000442201 ATP6V1B2P21281 511 aa7.61□□□□□ -1.19
CCDC39-201ENST00000442201 CSF2RBP32927 897 aa7.61□□□□□ -1.19
CCDC39-201ENST00000442201 SOAT1P35610 550 aa7.61□□□□□ -1.19
CCDC39-201ENST00000442201 FRKP42685 505 aaPredicted RBP7.61□□□□□ -1.19
CCDC39-201ENST00000442201 BLVRAP53004 296 aa7.61□□□□□ -1.19
CCDC39-201ENST00000442201 PCBP4P57723 403 aaKnown RBP7.61□□□□□ -1.19
CCDC39-201ENST00000442201 SNRPNP63162 240 aaKnown RBP7.61□□□□□ -1.19
CCDC39-201ENST00000442201 HSD11B2P80365 405 aa7.61□□□□□ -1.19
CCDC39-201ENST00000442201 CFHR1Q03591 330 aa7.61□□□□□ -1.19
CCDC39-201ENST00000442201 RUNX1T1Q06455 604 aa7.61□□□□□ -1.19
CCDC39-201ENST00000442201 CDK10Q15131 360 aa7.61□□□□□ -1.19
CCDC39-201ENST00000442201 CYP51A1Q16850 503 aa7.61□□□□□ -1.19
CCDC39-201ENST00000442201 SNAP47Q5SQN1 464 aa7.61□□□□□ -1.19
CCDC39-201ENST00000442201 GTF2IRD2BQ6EKJ0 949 aa7.61□□□□□ -1.19
CCDC39-201ENST00000442201 GLYATQ6IB77 296 aa7.61□□□□□ -1.19
CCDC39-201ENST00000442201 GTF2IRD2Q86UP8 949 aa7.61□□□□□ -1.19
CCDC39-201ENST00000442201 CARM1Q86X55 608 aa7.61□□□□□ -1.19
CCDC39-201ENST00000442201 PNPT1Q8TCS8 783 aaKnown RBP7.61□□□□□ -1.19
CCDC39-201ENST00000442201 ZFP90Q8TF47 636 aa7.61□□□□□ -1.19
CCDC39-201ENST00000442201 CNBD2Q96M20 576 aa7.61□□□□□ -1.19
CCDC39-201ENST00000442201 SLC35A5Q9BS91 424 aa7.61□□□□□ -1.19
CCDC39-201ENST00000442201 SLAMF7Q9NQ25 335 aa7.61□□□□□ -1.19
CCDC39-201ENST00000442201 ENTPD4Q9Y227 616 aa7.61□□□□□ -1.19
CCDC39-201ENST00000442201 NAALAD2Q9Y3Q0 740 aa7.61□□□□□ -1.19
CCDC39-201ENST00000442201 TESMINQ9Y4I5 508 aa7.61□□□□□ -1.19
CCDC39-201ENST00000442201 FAM220BPB1ANY3 271 aa7.61□□□□□ -1.19
CCDC39-201ENST00000442201 TMX2-CTNND1H3BSU7 103 aa7.61□□□□□ -1.19
CCDC39-201ENST00000442201 TAF4O00268 1085 aa7.61□□□□□ -1.19
CCDC39-201ENST00000442201 KHNYNO15037 678 aaKnown RBP7.61□□□□□ -1.19
CCDC39-201ENST00000442201 NCK1P16333 377 aa7.61□□□□□ -1.19
CCDC39-201ENST00000442201 GABRA4P48169 554 aa7.61□□□□□ -1.19
CCDC39-201ENST00000442201 SEPHS1P49903 392 aa7.61□□□□□ -1.19
CCDC39-201ENST00000442201 LIM2P55344 173 aa7.61□□□□□ -1.19
CCDC39-201ENST00000442201 RHAGQ02094 409 aa7.61□□□□□ -1.19
CCDC39-201ENST00000442201 TNFRSF17Q02223 184 aa7.61□□□□□ -1.19
CCDC39-201ENST00000442201 SLC14A1Q13336 389 aa7.61□□□□□ -1.19
CCDC39-201ENST00000442201 RUNX2Q13950 521 aa7.61□□□□□ -1.19
CCDC39-201ENST00000442201 ANGPTL8Q6UXH0 198 aa7.61□□□□□ -1.19
CCDC39-201ENST00000442201 PRSS41Q7RTY9 318 aa7.61□□□□□ -1.19
CCDC39-201ENST00000442201 ZNF551Q7Z340 670 aaPredicted RBP7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms