RNA–Protein interactions for RNA: ENST00000441443.6

SHOX2-203, Transcript of short stature homeobox 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHOX2, Length 3,038 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-203ENST00000441443 METAP1DQ6UB28 335 aaPredicted RBP19.19■□□□□ 0.66
SHOX2-203ENST00000441443 CRTC1Q6UUV9 634 aa19.19■□□□□ 0.66
SHOX2-203ENST00000441443 LMNTD1Q8N9Z9 388 aa19.19■□□□□ 0.66
SHOX2-203ENST00000441443 C7orf57Q8NEG2 295 aa19.19■□□□□ 0.66
SHOX2-203ENST00000441443 TOR1AIP2Q8NFQ8 470 aa19.19■□□□□ 0.66
SHOX2-203ENST00000441443 CEP76Q8TAP6 659 aa19.19■□□□□ 0.66
SHOX2-203ENST00000441443 GPBP1L1Q9HC44 474 aaPredicted RBP19.19■□□□□ 0.66
SHOX2-203ENST00000441443 SLCO1C1Q9NYB5 712 aa19.19■□□□□ 0.66
SHOX2-203ENST00000441443 GULP1Q9UBP9 304 aa19.19■□□□□ 0.66
SHOX2-203ENST00000441443 FRMPD3Q5JV73 1810 aa19.19■□□□□ 0.66
SHOX2-203ENST00000441443 H0YIV9 168 aa19.19■□□□□ 0.66
SHOX2-203ENST00000441443 TFPIP10646 304 aa19.19■□□□□ 0.66
SHOX2-203ENST00000441443 GJA1P17302 382 aa19.19■□□□□ 0.66
SHOX2-203ENST00000441443 ZNF81P51508 661 aa19.19■□□□□ 0.66
SHOX2-203ENST00000441443 ZNF763Q0D2J5 394 aa19.19■□□□□ 0.66
SHOX2-203ENST00000441443 DEFB115Q30KQ5 88 aa19.19■□□□□ 0.66
SHOX2-203ENST00000441443 SPIN4Q56A73 249 aa19.19■□□□□ 0.66
SHOX2-203ENST00000441443 GRHL2Q6ISB3 625 aa19.19■□□□□ 0.66
SHOX2-203ENST00000441443 TMEM107Q6UX40 140 aa19.19■□□□□ 0.66
SHOX2-203ENST00000441443 WDR48Q8TAF3 677 aa19.19■□□□□ 0.66
SHOX2-203ENST00000441443 APOBEC4Q8WW27 367 aaKnown RBP19.19■□□□□ 0.66
SHOX2-203ENST00000441443 RAB8BQ92930 207 aa19.19■□□□□ 0.66
SHOX2-203ENST00000441443 BRD9Q9H8M2 597 aa19.19■□□□□ 0.66
SHOX2-203ENST00000441443 ATP6V1HQ9UI12 483 aa19.19■□□□□ 0.66
SHOX2-203ENST00000441443 RPS10-NUDT3A0A1W2PQS6 291 aa19.18■□□□□ 0.66
SHOX2-203ENST00000441443 C5orf58C9J3I9 102 aa19.18■□□□□ 0.66
SHOX2-203ENST00000441443 GPR37L1O60883 481 aa19.18■□□□□ 0.66
SHOX2-203ENST00000441443 NME6O75414 186 aaPredicted RBP19.18■□□□□ 0.66
SHOX2-203ENST00000441443 TGFB1P01137 390 aa19.18■□□□□ 0.66
SHOX2-203ENST00000441443 GAS1P54826 345 aa19.18■□□□□ 0.66
SHOX2-203ENST00000441443 AP1S2P56377 157 aa19.18■□□□□ 0.66
SHOX2-203ENST00000441443 REEP3Q6NUK4 255 aa19.18■□□□□ 0.66
SHOX2-203ENST00000441443 IL20RBQ6UXL0 311 aa19.18■□□□□ 0.66
SHOX2-203ENST00000441443 KRT74Q7RTS7 529 aa19.18■□□□□ 0.66
SHOX2-203ENST00000441443 COMMD6Q7Z4G1 85 aa19.18■□□□□ 0.66
SHOX2-203ENST00000441443 DNAJB7Q7Z6W7 309 aaPredicted RBP19.18■□□□□ 0.66
SHOX2-203ENST00000441443 APCDD1Q8J025 514 aa19.18■□□□□ 0.66
SHOX2-203ENST00000441443 ZNF461Q8TAF7 563 aa19.18■□□□□ 0.66
SHOX2-203ENST00000441443 CLP1Q92989 425 aaKnown RBP19.18■□□□□ 0.66
SHOX2-203ENST00000441443 AIFM2Q9BRQ8 373 aa19.18■□□□□ 0.66
SHOX2-203ENST00000441443 RNF32Q9H0A6 362 aa19.18■□□□□ 0.66
SHOX2-203ENST00000441443 RANBP3Q9H6Z4 567 aaPredicted RBP19.18■□□□□ 0.66
SHOX2-203ENST00000441443 CLCA2Q9UQC9 943 aa19.18■□□□□ 0.66
SHOX2-203ENST00000441443 RWDD3Q9Y3V2 267 aa19.18■□□□□ 0.66
SHOX2-203ENST00000441443 HELZP42694 1942 aaKnown RBP19.18■□□□□ 0.66
SHOX2-203ENST00000441443 C5orf42Q9H799 3197 aa19.18■□□□□ 0.66
SHOX2-203ENST00000441443 LOC105369274A0A096LPK9 316 aa19.18■□□□□ 0.66
SHOX2-203ENST00000441443 ARHGEF33A8MVX0 844 aa19.18■□□□□ 0.66
SHOX2-203ENST00000441443 FURINP09958 794 aa19.18■□□□□ 0.66
SHOX2-203ENST00000441443 CELP19835 753 aa19.18■□□□□ 0.66
SHOX2-203ENST00000441443 STOMP27105 288 aa19.18■□□□□ 0.66
SHOX2-203ENST00000441443 SRP9P49458 86 aaKnown RBP19.18■□□□□ 0.66
SHOX2-203ENST00000441443 TAS2R50P59544 299 aa19.18■□□□□ 0.66
SHOX2-203ENST00000441443 RAET1GQ6H3X3 334 aa19.18■□□□□ 0.66
SHOX2-203ENST00000441443 BRAT1Q6PJG6 821 aa19.18■□□□□ 0.66
SHOX2-203ENST00000441443 AGTRAPQ6RW13 159 aa19.18■□□□□ 0.66
SHOX2-203ENST00000441443 OR4N4Q8N0Y3 316 aa19.18■□□□□ 0.66
SHOX2-203ENST00000441443 PLA2G15Q8NCC3 412 aa19.18■□□□□ 0.66
SHOX2-203ENST00000441443 IGSF21Q96ID5 467 aa19.18■□□□□ 0.66
SHOX2-203ENST00000441443 C1QTNF6Q9BXI9 259 aa19.18■□□□□ 0.66
SHOX2-203ENST00000441443 POLDIP3Q9BY77 421 aaKnown RBP19.18■□□□□ 0.66
SHOX2-203ENST00000441443 OR51B5Q9H339 312 aa19.18■□□□□ 0.66
SHOX2-203ENST00000441443 CTPS2Q9NRF8 586 aa19.18■□□□□ 0.66
SHOX2-203ENST00000441443 A0A1W2PRB8 838 aa19.17■□□□□ 0.66
SHOX2-203ENST00000441443 PRR23AA6NEV1 266 aa19.17■□□□□ 0.66
SHOX2-203ENST00000441443 AGAP14A8MT82 685 aa19.17■□□□□ 0.66
SHOX2-203ENST00000441443 FAAHO00519 579 aa19.17■□□□□ 0.66
SHOX2-203ENST00000441443 HOXA2O43364 376 aa19.17■□□□□ 0.66
SHOX2-203ENST00000441443 UGDHO60701 494 aa19.17■□□□□ 0.66
SHOX2-203ENST00000441443 MPC2O95563 127 aa19.17■□□□□ 0.66
SHOX2-203ENST00000441443 HK1P19367 917 aa19.17■□□□□ 0.66
SHOX2-203ENST00000441443 FGF9P31371 208 aaPredicted RBP19.17■□□□□ 0.66
SHOX2-203ENST00000441443 GIPRP48546 466 aa19.17■□□□□ 0.66
SHOX2-203ENST00000441443 DGKGP49619 791 aa19.17■□□□□ 0.66
SHOX2-203ENST00000441443 ATP12AP54707 1039 aa19.17■□□□□ 0.66
SHOX2-203ENST00000441443 PLA1AQ53H76 456 aa19.17■□□□□ 0.66
SHOX2-203ENST00000441443 C3orf38Q5JPI3 329 aa19.17■□□□□ 0.66
SHOX2-203ENST00000441443 TMEM91Q6ZNR0 172 aa19.17■□□□□ 0.66
SHOX2-203ENST00000441443 ADGRD2Q7Z7M1 963 aa19.17■□□□□ 0.66
SHOX2-203ENST00000441443 SLC38A5Q8WUX1 472 aa19.17■□□□□ 0.66
SHOX2-203ENST00000441443 TMEM169Q96HH4 297 aa19.17■□□□□ 0.66
SHOX2-203ENST00000441443 BRF2Q9HAW0 419 aa19.17■□□□□ 0.66
SHOX2-203ENST00000441443 CDH23Q9H251 3354 aa19.17■□□□□ 0.66
SHOX2-203ENST00000441443 PIPSLA2A3N6 862 aa19.17■□□□□ 0.66
SHOX2-203ENST00000441443 TMEM202A6NGA9 273 aa19.17■□□□□ 0.66
SHOX2-203ENST00000441443 EPHA5P54756 1037 aa19.17■□□□□ 0.66
SHOX2-203ENST00000441443 GRK1Q15835 563 aa19.17■□□□□ 0.66
SHOX2-203ENST00000441443 GPR139Q6DWJ6 353 aa19.17■□□□□ 0.66
SHOX2-203ENST00000441443 HMGN2P46Q86SG4 172 aa19.17■□□□□ 0.66
SHOX2-203ENST00000441443 TMPRSS11BQ86T26 416 aa19.17■□□□□ 0.66
SHOX2-203ENST00000441443 SORCS2Q96PQ0 1159 aa19.17■□□□□ 0.66
SHOX2-203ENST00000441443 GPA33Q99795 319 aa19.17■□□□□ 0.66
SHOX2-203ENST00000441443 CFDP00746 253 aaPredicted RBP19.17■□□□□ 0.66
SHOX2-203ENST00000441443 EPHX1P07099 455 aa19.17■□□□□ 0.66
SHOX2-203ENST00000441443 LIMS3P0CW19 117 aa19.17■□□□□ 0.66
SHOX2-203ENST00000441443 LIMS4P0CW20 117 aa19.17■□□□□ 0.66
SHOX2-203ENST00000441443 TALDO1P37837 337 aa19.17■□□□□ 0.66
SHOX2-203ENST00000441443 ETV3P41162 512 aa19.17■□□□□ 0.66
SHOX2-203ENST00000441443 CLCNKAP51800 687 aa19.17■□□□□ 0.66
SHOX2-203ENST00000441443 LGALSLQ3ZCW2 172 aaPredicted RBP19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms