RNA–Protein interactions for RNA: ENST00000439765.3

CCDC188-201, Transcript of coiled-coil domain containing 188, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CCDC188, Length 1,475 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188-201ENST00000439765 OR2J2O76002 312 aa16.39■□□□□ 0.21
CCDC188-201ENST00000439765 CT62P0C5K7 136 aa16.39■□□□□ 0.21
CCDC188-201ENST00000439765 PORP16435 677 aaPredicted RBP16.39■□□□□ 0.21
CCDC188-201ENST00000439765 MAPK1P28482 360 aa16.39■□□□□ 0.21
CCDC188-201ENST00000439765 SSTR4P31391 388 aa16.39■□□□□ 0.21
CCDC188-201ENST00000439765 RNF4P78317 190 aa16.39■□□□□ 0.21
CCDC188-201ENST00000439765 C6orf163Q5TEZ5 329 aa16.39■□□□□ 0.21
CCDC188-201ENST00000439765 SPINK14Q6IE38 97 aa16.39■□□□□ 0.21
CCDC188-201ENST00000439765 ARMC10Q8N2F6 343 aa16.39■□□□□ 0.21
CCDC188-201ENST00000439765 LRRC25Q8N386 305 aaPredicted RBP16.39■□□□□ 0.21
CCDC188-201ENST00000439765 MDS2Q8NDY4 140 aa16.39■□□□□ 0.21
CCDC188-201ENST00000439765 GAL3ST4Q96RP7 486 aa16.39■□□□□ 0.21
CCDC188-201ENST00000439765 BRINP2Q9C0B6 783 aa16.39■□□□□ 0.21
CCDC188-201ENST00000439765 MYNNQ9NPC7 610 aa16.39■□□□□ 0.21
CCDC188-201ENST00000439765 MIEF1Q9NQG6 463 aa16.39■□□□□ 0.21
CCDC188-201ENST00000439765 KLHL1Q9NR64 748 aa16.39■□□□□ 0.21
CCDC188-201ENST00000439765 NOP53Q9NZM5 478 aaKnown RBP16.39■□□□□ 0.21
CCDC188-201ENST00000439765 LRFN1Q9P244 771 aa16.39■□□□□ 0.21
CCDC188-201ENST00000439765 MYOTQ9UBF9 498 aa16.39■□□□□ 0.21
CCDC188-201ENST00000439765 PSME2Q9UL46 239 aa16.39■□□□□ 0.21
CCDC188-201ENST00000439765 COPG1Q9Y678 874 aaKnown RBP16.39■□□□□ 0.21
CCDC188-201ENST00000439765 ZNF780BQ9Y6R6 833 aa16.39■□□□□ 0.21
CCDC188-201ENST00000439765 CENPEQ02224 2701 aa16.39■□□□□ 0.21
CCDC188-201ENST00000439765 NBPF19A0A087WUL8 3843 aa16.38■□□□□ 0.21
CCDC188-201ENST00000439765 PRAMEF2O60811 474 aa16.38■□□□□ 0.21
CCDC188-201ENST00000439765 RNF224P0DH78 156 aa16.38■□□□□ 0.21
CCDC188-201ENST00000439765 PRPS2P11908 318 aa16.38■□□□□ 0.21
CCDC188-201ENST00000439765 BCKDHAP12694 445 aa16.38■□□□□ 0.21
CCDC188-201ENST00000439765 DRD2P14416 443 aa16.38■□□□□ 0.21
CCDC188-201ENST00000439765 CSNK2A2P19784 350 aaPredicted RBP16.38■□□□□ 0.21
CCDC188-201ENST00000439765 NCF2P19878 526 aaPredicted RBP16.38■□□□□ 0.21
CCDC188-201ENST00000439765 TACR1P25103 407 aa16.38■□□□□ 0.21
CCDC188-201ENST00000439765 GSTM5P46439 218 aa16.38■□□□□ 0.21
CCDC188-201ENST00000439765 CYB561P49447 251 aa16.38■□□□□ 0.21
CCDC188-201ENST00000439765 DIO3P55073 304 aa16.38■□□□□ 0.21
CCDC188-201ENST00000439765 C2orf80Q0P641 193 aa16.38■□□□□ 0.21
CCDC188-201ENST00000439765 LTB4RQ15722 352 aa16.38■□□□□ 0.21
CCDC188-201ENST00000439765 GSTA3Q16772 222 aa16.38■□□□□ 0.21
CCDC188-201ENST00000439765 ZNF766Q5HY98 468 aa16.38■□□□□ 0.21
CCDC188-201ENST00000439765 RNF111Q6ZNA4 994 aa16.38■□□□□ 0.21
CCDC188-201ENST00000439765 TMEM156Q8N614 296 aa16.38■□□□□ 0.21
CCDC188-201ENST00000439765 ADCY4Q8NFM4 1077 aa16.38■□□□□ 0.21
CCDC188-201ENST00000439765 CLHC1Q8NHS4 586 aa16.38■□□□□ 0.21
CCDC188-201ENST00000439765 AIG1Q9NVV5 245 aa16.38■□□□□ 0.21
CCDC188-201ENST00000439765 ENTPD4Q9Y227 616 aa16.38■□□□□ 0.21
CCDC188-201ENST00000439765 PCNX1Q96RV3 2341 aa16.38■□□□□ 0.21
CCDC188-201ENST00000439765 NEURL1O76050 574 aa16.37■□□□□ 0.21
CCDC188-201ENST00000439765 CLPSP04118 112 aa16.37■□□□□ 0.21
CCDC188-201ENST00000439765 ATP1B1P05026 303 aa16.37■□□□□ 0.21
CCDC188-201ENST00000439765 SDC1P18827 310 aa16.37■□□□□ 0.21
CCDC188-201ENST00000439765 DDCP20711 480 aa16.37■□□□□ 0.21
CCDC188-201ENST00000439765 SSR4P51571 173 aa16.37■□□□□ 0.21
CCDC188-201ENST00000439765 PMP22Q01453 160 aa16.37■□□□□ 0.21
CCDC188-201ENST00000439765 CYP4Z2PQ8N1L4 340 aa16.37■□□□□ 0.21
CCDC188-201ENST00000439765 VWA5B2Q8N398 1253 aa16.37■□□□□ 0.21
CCDC188-201ENST00000439765 LIX1Q8N485 282 aa16.37■□□□□ 0.21
CCDC188-201ENST00000439765 OR8K3Q8NH51 312 aa16.37■□□□□ 0.21
CCDC188-201ENST00000439765 PRR7Q8TB68 274 aa16.37■□□□□ 0.21
CCDC188-201ENST00000439765 GFM2Q969S9 779 aaKnown RBP16.37■□□□□ 0.21
CCDC188-201ENST00000439765 EGLN2Q96KS0 407 aa16.37■□□□□ 0.21
CCDC188-201ENST00000439765 MARK4Q96L34 752 aa16.37■□□□□ 0.21
CCDC188-201ENST00000439765 C5orf34Q96MH7 638 aa16.37■□□□□ 0.21
CCDC188-201ENST00000439765 ZNF681Q96N22 645 aa16.37■□□□□ 0.21
CCDC188-201ENST00000439765 TSSK3Q96PN8 268 aa16.37■□□□□ 0.21
CCDC188-201ENST00000439765 RASL10BQ96S79 203 aa16.37■□□□□ 0.21
CCDC188-201ENST00000439765 AGPAT4Q9NRZ5 378 aa16.37■□□□□ 0.21
CCDC188-201ENST00000439765 PLEKHB1Q9UF11 243 aaPredicted RBP16.37■□□□□ 0.21
CCDC188-201ENST00000439765 YARS2Q9Y2Z4 477 aaKnown RBP16.37■□□□□ 0.21
CCDC188-201ENST00000439765 GPR45Q9Y5Y3 372 aa16.37■□□□□ 0.21
CCDC188-201ENST00000439765 ANKUB1A6NFN9 424 aa16.36■□□□□ 0.21
CCDC188-201ENST00000439765 CCDC22O60826 627 aa16.36■□□□□ 0.21
CCDC188-201ENST00000439765 SLC25A12O75746 678 aa16.36■□□□□ 0.21
CCDC188-201ENST00000439765 LRATO95237 230 aa16.36■□□□□ 0.21
CCDC188-201ENST00000439765 G6PDP11413 515 aa16.36■□□□□ 0.21
CCDC188-201ENST00000439765 IDO1P14902 403 aa16.36■□□□□ 0.21
CCDC188-201ENST00000439765 PCSK2P16519 638 aa16.36■□□□□ 0.21
CCDC188-201ENST00000439765 GALNSP34059 522 aa16.36■□□□□ 0.21
CCDC188-201ENST00000439765 SOX3P41225 446 aa16.36■□□□□ 0.21
CCDC188-201ENST00000439765 SLC37A1P57057 533 aa16.36■□□□□ 0.21
CCDC188-201ENST00000439765 IRX1P78414 480 aaPredicted RBP16.36■□□□□ 0.21
CCDC188-201ENST00000439765 MRPS35P82673 323 aaKnown RBP16.36■□□□□ 0.21
CCDC188-201ENST00000439765 PRICKLE4Q2TBC4 344 aa16.36■□□□□ 0.21
CCDC188-201ENST00000439765 FAM71E1Q6IPT2 247 aa16.36■□□□□ 0.21
CCDC188-201ENST00000439765 FAM111BQ6SJ93 734 aa16.36■□□□□ 0.21
CCDC188-201ENST00000439765 FAM180AQ6UWF9 173 aa16.36■□□□□ 0.21
CCDC188-201ENST00000439765 SLC29A4Q7RTT9 530 aa16.36■□□□□ 0.21
CCDC188-201ENST00000439765 MTDHQ86UE4 582 aaKnown RBP16.36■□□□□ 0.21
CCDC188-201ENST00000439765 ZNF227Q86WZ6 799 aa16.36■□□□□ 0.21
CCDC188-201ENST00000439765 TICAM1Q8IUC6 712 aa16.36■□□□□ 0.21
CCDC188-201ENST00000439765 OR5L2Q8NGL0 311 aa16.36■□□□□ 0.21
CCDC188-201ENST00000439765 PUM2Q8TB72 1066 aaKnown RBP eCLIP16.36■□□□□ 0.21
CCDC188-201ENST00000439765 GRHL3Q8TE85 626 aa16.36■□□□□ 0.21
CCDC188-201ENST00000439765 ASB15Q8WXK1 588 aa16.36■□□□□ 0.21
CCDC188-201ENST00000439765 ZNF385DQ9H6B1 395 aa16.36■□□□□ 0.21
CCDC188-201ENST00000439765 SAR1AQ9NR31 198 aa16.36■□□□□ 0.21
CCDC188-201ENST00000439765 GIMAP4Q9NUV9 329 aa16.36■□□□□ 0.21
CCDC188-201ENST00000439765 SDAD1Q9NVU7 687 aaKnown RBP eCLIP16.36■□□□□ 0.21
CCDC188-201ENST00000439765 MAT2BQ9NZL9 334 aa16.36■□□□□ 0.21
CCDC188-201ENST00000439765 EHD3Q9NZN3 535 aa16.36■□□□□ 0.21
CCDC188-201ENST00000439765 BAIAP2L1Q9UHR4 511 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms