RNA–Protein interactions for RNA: ENST00000439468.1

VPS41-207, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 354 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-207ENST00000439468 FASTKQ14296 549 aaKnown RBP2.81□□□□□ -1.96
VPS41-207ENST00000439468 CCL14Q16627 93 aa2.81□□□□□ -1.96
VPS41-207ENST00000439468 HKDC1Q2TB90 917 aa2.81□□□□□ -1.96
VPS41-207ENST00000439468 AGKQ53H12 422 aa2.81□□□□□ -1.96
VPS41-207ENST00000439468 C9orf66Q5T8R8 295 aa2.81□□□□□ -1.96
VPS41-207ENST00000439468 NEK5Q6P3R8 708 aa2.81□□□□□ -1.96
VPS41-207ENST00000439468 ASRGL1Q7L266 308 aa2.81□□□□□ -1.96
VPS41-207ENST00000439468 RNF130Q86XS8 419 aa2.81□□□□□ -1.96
VPS41-207ENST00000439468 HIST2H2ABQ8IUE6 130 aaPredicted RBP2.81□□□□□ -1.96
VPS41-207ENST00000439468 LMNTD2Q8IXW0 634 aa2.81□□□□□ -1.96
VPS41-207ENST00000439468 SAMD12Q8N8I0 201 aa2.81□□□□□ -1.96
VPS41-207ENST00000439468 ZNF491Q8N8L2 437 aa2.81□□□□□ -1.96
VPS41-207ENST00000439468 ICA1LQ8NDH6 482 aa2.81□□□□□ -1.96
VPS41-207ENST00000439468 FBXO25Q8TCJ0 367 aa2.81□□□□□ -1.96
VPS41-207ENST00000439468 NPRL2Q8WTW4 380 aa2.81□□□□□ -1.96
VPS41-207ENST00000439468 TMEM37Q8WXS4 190 aa2.81□□□□□ -1.96
VPS41-207ENST00000439468 HIST1H2ACQ93077 130 aa2.81□□□□□ -1.96
VPS41-207ENST00000439468 HSD17B14Q9BPX1 270 aa2.81□□□□□ -1.96
VPS41-207ENST00000439468 OCR1Q9BZK8 76 aa2.81□□□□□ -1.96
VPS41-207ENST00000439468 LRRCC1Q9C099 1032 aa2.81□□□□□ -1.96
VPS41-207ENST00000439468 C1orf21Q9H246 121 aa2.81□□□□□ -1.96
VPS41-207ENST00000439468 HEXA-AS1Q9H8Q6 139 aa2.81□□□□□ -1.96
VPS41-207ENST00000439468 NRN1Q9NPD7 142 aa2.81□□□□□ -1.96
VPS41-207ENST00000439468 RPS10P5Q9NQ39 176 aa2.81□□□□□ -1.96
VPS41-207ENST00000439468 RCOR3Q9P2K3 495 aaPredicted RBP2.81□□□□□ -1.96
VPS41-207ENST00000439468 MIOXQ9UGB7 285 aa2.81□□□□□ -1.96
VPS41-207ENST00000439468 PLA2G4CQ9UP65 541 aa2.81□□□□□ -1.96
VPS41-207ENST00000439468 ZNF175Q9Y473 711 aa2.81□□□□□ -1.96
VPS41-207ENST00000439468 AUP1Q9Y679 476 aa2.81□□□□□ -1.96
VPS41-207ENST00000439468 CLCA3PQ9Y6N3 262 aa2.81□□□□□ -1.96
VPS41-207ENST00000439468 PBRM1Q86U86 1689 aa2.81□□□□□ -1.96
VPS41-207ENST00000439468 CACNA1FO60840 1977 aa2.81□□□□□ -1.96
VPS41-207ENST00000439468 PREX1Q8TCU6 1659 aa2.8□□□□□ -1.96
VPS41-207ENST00000439468 GLI2P10070 1586 aa2.8□□□□□ -1.96
VPS41-207ENST00000439468 TOPBP1Q92547 1522 aa2.8□□□□□ -1.96
VPS41-207ENST00000439468 RNF103-CHMP3A0A140T963 221 aa2.8□□□□□ -1.96
VPS41-207ENST00000439468 A0A1W2PPR1 153 aa2.8□□□□□ -1.96
VPS41-207ENST00000439468 SRRM5B3KS81 715 aa2.8□□□□□ -1.96
VPS41-207ENST00000439468 TXNL1O43396 289 aa2.8□□□□□ -1.96
VPS41-207ENST00000439468 PDGFBP01127 241 aaPredicted RBP2.8□□□□□ -1.96
VPS41-207ENST00000439468 SERPINF2P08697 491 aa2.8□□□□□ -1.96
VPS41-207ENST00000439468 UCP1P25874 307 aa2.8□□□□□ -1.96
VPS41-207ENST00000439468 PRDX2P32119 198 aa2.8□□□□□ -1.96
VPS41-207ENST00000439468 HMGCLP35914 325 aa2.8□□□□□ -1.96
VPS41-207ENST00000439468 CD86P42081 329 aa2.8□□□□□ -1.96
VPS41-207ENST00000439468 ALDH3B1P43353 468 aa2.8□□□□□ -1.96
VPS41-207ENST00000439468 NOVP48745 357 aa2.8□□□□□ -1.96
VPS41-207ENST00000439468 CSRP3P50461 194 aa2.8□□□□□ -1.96
VPS41-207ENST00000439468 SSTP61278 116 aa2.8□□□□□ -1.96
VPS41-207ENST00000439468 MS4A2Q01362 244 aa2.8□□□□□ -1.96
VPS41-207ENST00000439468 FUT7Q11130 342 aa2.8□□□□□ -1.96
VPS41-207ENST00000439468 SPP2Q13103 211 aa2.8□□□□□ -1.96
VPS41-207ENST00000439468 GAMTQ14353 236 aa2.8□□□□□ -1.96
VPS41-207ENST00000439468 ZNF239Q16600 458 aaKnown RBP2.8□□□□□ -1.96
VPS41-207ENST00000439468 EMBQ6PCB8 327 aa2.8□□□□□ -1.96
VPS41-207ENST00000439468 RFWD3Q6PCD5 774 aa2.8□□□□□ -1.96
VPS41-207ENST00000439468 ADAMTSL5Q6ZMM2 481 aa2.8□□□□□ -1.96
VPS41-207ENST00000439468 GPR142Q7Z601 462 aa2.8□□□□□ -1.96
VPS41-207ENST00000439468 LUZP1Q86V48 1076 aa2.8□□□□□ -1.96
VPS41-207ENST00000439468 CATSPER3Q86XQ3 398 aa2.8□□□□□ -1.96
VPS41-207ENST00000439468 KDM8Q8N371 416 aa2.8□□□□□ -1.96
VPS41-207ENST00000439468 C4orf32Q8N8J7 132 aa2.8□□□□□ -1.96
VPS41-207ENST00000439468 MRPL43Q8N983 215 aaKnown RBP2.8□□□□□ -1.96
VPS41-207ENST00000439468 OR4F17Q8NGA8 305 aa2.8□□□□□ -1.96
VPS41-207ENST00000439468 RDH11Q8TC12 318 aa2.8□□□□□ -1.96
VPS41-207ENST00000439468 NTNG2Q96CW9 530 aa2.8□□□□□ -1.96
VPS41-207ENST00000439468 OR4F4Q96R69 305 aa2.8□□□□□ -1.96
VPS41-207ENST00000439468 RNF41Q9H4P4 317 aaPredicted RBP2.8□□□□□ -1.96
VPS41-207ENST00000439468 JPT2Q9H910 190 aa2.8□□□□□ -1.96
VPS41-207ENST00000439468 KLK13Q9UKR3 277 aa2.8□□□□□ -1.96
VPS41-207ENST00000439468 RARRES3Q9UL19 164 aa2.8□□□□□ -1.96
VPS41-207ENST00000439468 MGAT4AQ9UM21 535 aa2.8□□□□□ -1.96
VPS41-207ENST00000439468 CPQQ9Y646 472 aa2.8□□□□□ -1.96
VPS41-207ENST00000439468 FER1L5A0AVI2 2057 aa2.8□□□□□ -1.96
VPS41-207ENST00000439468 TP53BP1Q12888 1972 aaPredicted RBP2.8□□□□□ -1.96
VPS41-207ENST00000439468 CFAP43Q8NDM7 1665 aa2.79□□□□□ -1.96
VPS41-207ENST00000439468 CFTRP13569 1480 aa2.79□□□□□ -1.96
VPS41-207ENST00000439468 UBE4BO95155 1302 aa2.79□□□□□ -1.96
VPS41-207ENST00000439468 AFF2P51816 1311 aa2.79□□□□□ -1.96
VPS41-207ENST00000439468 IGHV3-16A0A0C4DH30 117 aa2.79□□□□□ -1.96
VPS41-207ENST00000439468 PHF1O43189 567 aaPredicted RBP2.79□□□□□ -1.96
VPS41-207ENST00000439468 RANBP6O60518 1105 aaKnown RBP2.79□□□□□ -1.96
VPS41-207ENST00000439468 LMO2P25791 158 aa2.79□□□□□ -1.96
VPS41-207ENST00000439468 TMOD1P28289 359 aa2.79□□□□□ -1.96
VPS41-207ENST00000439468 CHRNA3P32297 505 aa2.79□□□□□ -1.96
VPS41-207ENST00000439468 SGSHP51688 502 aa2.79□□□□□ -1.96
VPS41-207ENST00000439468 NDST1P52848 882 aa2.79□□□□□ -1.96
VPS41-207ENST00000439468 NAAAQ02083 359 aa2.79□□□□□ -1.96
VPS41-207ENST00000439468 GABPB1Q06547 395 aaPredicted RBP2.79□□□□□ -1.96
VPS41-207ENST00000439468 FCHO2Q0JRZ9 810 aa2.79□□□□□ -1.96
VPS41-207ENST00000439468 RAPSNQ13702 412 aa2.79□□□□□ -1.96
VPS41-207ENST00000439468 ZNF699Q32M78 642 aa2.79□□□□□ -1.96
VPS41-207ENST00000439468 C1orf189Q5VU69 101 aa2.79□□□□□ -1.96
VPS41-207ENST00000439468 FAM219BQ5XKK7 198 aa2.79□□□□□ -1.96
VPS41-207ENST00000439468 SPINK14Q6IE38 97 aa2.79□□□□□ -1.96
VPS41-207ENST00000439468 RHBDD2Q6NTF9 364 aa2.79□□□□□ -1.96
VPS41-207ENST00000439468 ZNF841Q6ZN19 808 aa2.79□□□□□ -1.96
VPS41-207ENST00000439468 HDDC3Q8N4P3 179 aa2.79□□□□□ -1.96
VPS41-207ENST00000439468 MLKLQ8NB16 471 aa2.79□□□□□ -1.96
VPS41-207ENST00000439468 ZNF397Q8NF99 534 aaPredicted RBP2.79□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms