RNA–Protein interactions for RNA: ENST00000439453.5

HPS4-206, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best)

Gene HPS4, Length 3,936 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-206ENST00000439453 DNAH14Q0VDD8 3507 aa8.11□□□□□ -1.11
HPS4-206ENST00000439453 JUPP14923 745 aa8.1□□□□□ -1.11
HPS4-206ENST00000439453 GLULP15104 373 aa8.1□□□□□ -1.11
HPS4-206ENST00000439453 LHCGRP22888 699 aa8.1□□□□□ -1.11
HPS4-206ENST00000439453 SLC6A12P48065 614 aa8.1□□□□□ -1.11
HPS4-206ENST00000439453 STARD6P59095 220 aa8.1□□□□□ -1.11
HPS4-206ENST00000439453 ILKQ13418 452 aa8.1□□□□□ -1.11
HPS4-206ENST00000439453 IKZF1Q13422 519 aa8.1□□□□□ -1.11
HPS4-206ENST00000439453 DDX39BQ13838 428 aaKnown RBP8.1□□□□□ -1.11
HPS4-206ENST00000439453 POU4F3Q15319 338 aa8.1□□□□□ -1.11
HPS4-206ENST00000439453 FCN2Q15485 313 aa8.1□□□□□ -1.11
HPS4-206ENST00000439453 TAF12Q16514 161 aa8.1□□□□□ -1.11
HPS4-206ENST00000439453 PLK5Q496M5 336 aa8.1□□□□□ -1.11
HPS4-206ENST00000439453 CRTC2Q53ET0 693 aaPredicted RBP8.1□□□□□ -1.11
HPS4-206ENST00000439453 FAM122CQ6P4D5 195 aa8.1□□□□□ -1.11
HPS4-206ENST00000439453 LINGO4Q6UY18 593 aa8.1□□□□□ -1.11
HPS4-206ENST00000439453 BMP8AQ7Z5Y6 402 aa8.1□□□□□ -1.11
HPS4-206ENST00000439453 COMMD7Q86VX2 200 aa8.1□□□□□ -1.11
HPS4-206ENST00000439453 TCEANCQ8N8B7 351 aa8.1□□□□□ -1.11
HPS4-206ENST00000439453 GALNT11Q8NCW6 608 aa8.1□□□□□ -1.11
HPS4-206ENST00000439453 CREB3L1Q96BA8 519 aa8.1□□□□□ -1.11
HPS4-206ENST00000439453 PHF21AQ96BD5 680 aa8.1□□□□□ -1.11
HPS4-206ENST00000439453 KCNJ15Q99712 375 aa8.1□□□□□ -1.11
HPS4-206ENST00000439453 LINC00597Q9H2U6 94 aa8.1□□□□□ -1.11
HPS4-206ENST00000439453 PIGUQ9H490 435 aa8.1□□□□□ -1.11
HPS4-206ENST00000439453 IL26Q9NPH9 171 aa8.1□□□□□ -1.11
HPS4-206ENST00000439453 DNAJC11Q9NVH1 559 aa8.1□□□□□ -1.11
HPS4-206ENST00000439453 WNT16Q9UBV4 365 aa8.1□□□□□ -1.11
HPS4-206ENST00000439453 NDOR1Q9UHB4 597 aa8.1□□□□□ -1.11
HPS4-206ENST00000439453 HCN2Q9UL51 889 aa8.1□□□□□ -1.11
HPS4-206ENST00000439453 MGAT4AQ9UM21 535 aa8.1□□□□□ -1.11
HPS4-206ENST00000439453 RABL2BQ9UNT1 228 aa8.1□□□□□ -1.11
HPS4-206ENST00000439453 ATG2BQ96BY7 2078 aa8.1□□□□□ -1.11
HPS4-206ENST00000439453 TRBV4-1A0A0J9YWV2 114 aa8.1□□□□□ -1.11
HPS4-206ENST00000439453 TRBC2A0A5B9 178 aa8.1□□□□□ -1.11
HPS4-206ENST00000439453 SH3BP5O60239 455 aa8.1□□□□□ -1.11
HPS4-206ENST00000439453 ACSL4O60488 711 aa8.1□□□□□ -1.11
HPS4-206ENST00000439453 RAF1P04049 648 aa8.1□□□□□ -1.11
HPS4-206ENST00000439453 CBSLP0DN79 551 aa8.1□□□□□ -1.11
HPS4-206ENST00000439453 IDSP22304 550 aa8.1□□□□□ -1.11
HPS4-206ENST00000439453 GDI1P31150 447 aa8.1□□□□□ -1.11
HPS4-206ENST00000439453 CBSP35520 551 aa8.1□□□□□ -1.11
HPS4-206ENST00000439453 TALDO1P37837 337 aa8.1□□□□□ -1.11
HPS4-206ENST00000439453 ETV5P41161 510 aa8.1□□□□□ -1.11
HPS4-206ENST00000439453 ETV1P50549 477 aa8.1□□□□□ -1.11
HPS4-206ENST00000439453 AGFG1P52594 562 aaKnown RBP8.1□□□□□ -1.11
HPS4-206ENST00000439453 RBBP4Q09028 425 aa8.1□□□□□ -1.11
HPS4-206ENST00000439453 MESP2Q0VG99 397 aa8.1□□□□□ -1.11
HPS4-206ENST00000439453 ZNF284Q2VY69 593 aa8.1□□□□□ -1.11
HPS4-206ENST00000439453 ZNF57Q68EA5 555 aaPredicted RBP8.1□□□□□ -1.11
HPS4-206ENST00000439453 C12orf73Q69YU5 71 aa8.1□□□□□ -1.11
HPS4-206ENST00000439453 CEACAM20Q6UY09 585 aa8.1□□□□□ -1.11
HPS4-206ENST00000439453 KIF18BQ86Y91 864 aa8.1□□□□□ -1.11
HPS4-206ENST00000439453 OR52I1Q8NGK6 324 aa8.1□□□□□ -1.11
HPS4-206ENST00000439453 TM9SF4Q92544 642 aa8.1□□□□□ -1.11
HPS4-206ENST00000439453 MTERF1Q99551 399 aaKnown RBP8.1□□□□□ -1.11
HPS4-206ENST00000439453 PHF11Q9UIL8 331 aa8.1□□□□□ -1.11
HPS4-206ENST00000439453 WNT6Q9Y6F9 365 aa8.1□□□□□ -1.11
HPS4-206ENST00000439453 CCDC88CQ9P219 2028 aa8.1□□□□□ -1.11
HPS4-206ENST00000439453 TRBV5-4A0A0C4DH59 114 aa8.1□□□□□ -1.11
HPS4-206ENST00000439453 SGK494L7N484 410 aa8.1□□□□□ -1.11
HPS4-206ENST00000439453 QSOX1O00391 747 aa8.1□□□□□ -1.11
HPS4-206ENST00000439453 STK25O00506 426 aa8.1□□□□□ -1.11
HPS4-206ENST00000439453 SLC30A4O14863 429 aa8.1□□□□□ -1.11
HPS4-206ENST00000439453 BET1O15155 118 aa8.1□□□□□ -1.11
HPS4-206ENST00000439453 LRRTM2O43300 516 aa8.1□□□□□ -1.11
HPS4-206ENST00000439453 STC2O76061 302 aa8.1□□□□□ -1.11
HPS4-206ENST00000439453 ADAP00813 363 aa8.1□□□□□ -1.11
HPS4-206ENST00000439453 IFNA14P01570 189 aa8.1□□□□□ -1.11
HPS4-206ENST00000439453 CKMP06732 381 aa8.1□□□□□ -1.11
HPS4-206ENST00000439453 TPOP07202 933 aa8.1□□□□□ -1.11
HPS4-206ENST00000439453 EVX1P49640 407 aa8.1□□□□□ -1.11
HPS4-206ENST00000439453 BTG1P62324 171 aa8.1□□□□□ -1.11
HPS4-206ENST00000439453 CDK6Q00534 326 aa8.1□□□□□ -1.11
HPS4-206ENST00000439453 HEPACAMQ14CZ8 416 aa8.1□□□□□ -1.11
HPS4-206ENST00000439453 LYPLAL1Q5VWZ2 237 aa8.1□□□□□ -1.11
HPS4-206ENST00000439453 OR8J1Q8NGP2 316 aa8.1□□□□□ -1.11
HPS4-206ENST00000439453 WACQ9BTA9 647 aa8.1□□□□□ -1.11
HPS4-206ENST00000439453 TRMT61BQ9BVS5 477 aaKnown RBP8.1□□□□□ -1.11
HPS4-206ENST00000439453 FOLH1BQ9HBA9 442 aa8.1□□□□□ -1.11
HPS4-206ENST00000439453 ZNF224Q9NZL3 707 aa8.1□□□□□ -1.11
HPS4-206ENST00000439453 CA14Q9ULX7 337 aa8.1□□□□□ -1.11
HPS4-206ENST00000439453 DIMT1Q9UNQ2 313 aaKnown RBP8.1□□□□□ -1.11
HPS4-206ENST00000439453 NCKAP1Q9Y2A7 1128 aa8.1□□□□□ -1.11
HPS4-206ENST00000439453 GSTK1Q9Y2Q3 226 aa8.1□□□□□ -1.11
HPS4-206ENST00000439453 NINQ8N4C6 2090 aa8.1□□□□□ -1.11
HPS4-206ENST00000439453 A0A0A6YYJ9 748 aa8.1□□□□□ -1.11
HPS4-206ENST00000439453 ANTXRLA6NF34 631 aa8.1□□□□□ -1.11
HPS4-206ENST00000439453 HNRNPCL2B2RXH8 293 aa8.1□□□□□ -1.11
HPS4-206ENST00000439453 H3BN98 237 aa8.1□□□□□ -1.11
HPS4-206ENST00000439453 PI15O43692 258 aa8.1□□□□□ -1.11
HPS4-206ENST00000439453 CHP2O43745 196 aa8.1□□□□□ -1.11
HPS4-206ENST00000439453 FZD6O60353 706 aa8.1□□□□□ -1.11
HPS4-206ENST00000439453 TPPPO94811 219 aa8.1□□□□□ -1.11
HPS4-206ENST00000439453 RAB36O95755 333 aa8.1□□□□□ -1.11
HPS4-206ENST00000439453 ANXA4P09525 319 aaPredicted RBP8.1□□□□□ -1.11
HPS4-206ENST00000439453 HIST1H2AGP0C0S8 130 aaPredicted RBP8.1□□□□□ -1.11
HPS4-206ENST00000439453 HK1P19367 917 aa8.1□□□□□ -1.11
HPS4-206ENST00000439453 HIST1H2ADP20671 130 aa8.1□□□□□ -1.11
HPS4-206ENST00000439453 PTBP1P26599 531 aaKnown RBP eCLIP8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms