RNA–Protein interactions for RNA: ENST00000431429.1

HMGB1P27-201, Transcript of high mobility group box 1 pseudogene 27, humanhuman

BASIC

Gene HMGB1P27, Length 603 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P27-201ENST00000431429 ZNF131P52739 623 aa2.6□□□□□ -1.99
HMGB1P27-201ENST00000431429 TMEM50BP56557 158 aa2.6□□□□□ -1.99
HMGB1P27-201ENST00000431429 SLC26A5P58743 744 aa2.6□□□□□ -1.99
HMGB1P27-201ENST00000431429 HILS1P60008 231 aa2.6□□□□□ -1.99
HMGB1P27-201ENST00000431429 RPS4XP62701 263 aaKnown RBP2.6□□□□□ -1.99
HMGB1P27-201ENST00000431429 MYBPC1Q00872 1141 aa2.6□□□□□ -1.99
HMGB1P27-201ENST00000431429 PMP22Q01453 160 aa2.6□□□□□ -1.99
HMGB1P27-201ENST00000431429 RBBP4Q09028 425 aa2.6□□□□□ -1.99
HMGB1P27-201ENST00000431429 SCGB2A2Q13296 93 aa2.6□□□□□ -1.99
HMGB1P27-201ENST00000431429 GCKRQ14397 625 aa2.6□□□□□ -1.99
HMGB1P27-201ENST00000431429 TAF7Q15545 349 aaPredicted RBP2.6□□□□□ -1.99
HMGB1P27-201ENST00000431429 CLPPQ16740 277 aaPredicted RBP2.6□□□□□ -1.99
HMGB1P27-201ENST00000431429 POM121L1PQ3SYA9 428 aa2.6□□□□□ -1.99
HMGB1P27-201ENST00000431429 MOGAT2Q3SYC2 334 aa2.6□□□□□ -1.99
HMGB1P27-201ENST00000431429 LIPKQ5VXJ0 399 aa2.6□□□□□ -1.99
HMGB1P27-201ENST00000431429 STEAP1BQ6NZ63 245 aa2.6□□□□□ -1.99
HMGB1P27-201ENST00000431429 LCLAT1Q6UWP7 414 aa2.6□□□□□ -1.99
HMGB1P27-201ENST00000431429 Q71RC1 249 aaPredicted RBP2.6□□□□□ -1.99
HMGB1P27-201ENST00000431429 ZNF329Q86UD4 541 aa2.6□□□□□ -1.99
HMGB1P27-201ENST00000431429 TBC1D10CQ8IV04 446 aa2.6□□□□□ -1.99
HMGB1P27-201ENST00000431429 OR1K1Q8NGR3 316 aa2.6□□□□□ -1.99
HMGB1P27-201ENST00000431429 SPPL2AQ8TCT8 520 aa2.6□□□□□ -1.99
HMGB1P27-201ENST00000431429 TMEM37Q8WXS4 190 aa2.6□□□□□ -1.99
HMGB1P27-201ENST00000431429 PHYHIPQ92561 330 aa2.6□□□□□ -1.99
HMGB1P27-201ENST00000431429 MCHR2Q969V1 340 aa2.6□□□□□ -1.99
HMGB1P27-201ENST00000431429 NTNG2Q96CW9 530 aa2.6□□□□□ -1.99
HMGB1P27-201ENST00000431429 ATXN7L3BQ96GX2 97 aa2.6□□□□□ -1.99
HMGB1P27-201ENST00000431429 POM121L2Q96KW2 1035 aa2.6□□□□□ -1.99
HMGB1P27-201ENST00000431429 ART5Q96L15 291 aa2.6□□□□□ -1.99
HMGB1P27-201ENST00000431429 C16orf45Q96MC5 204 aaPredicted RBP2.6□□□□□ -1.99
HMGB1P27-201ENST00000431429 DEFB118Q96PH6 123 aa2.6□□□□□ -1.99
HMGB1P27-201ENST00000431429 SYT15Q9BQS2 421 aa2.6□□□□□ -1.99
HMGB1P27-201ENST00000431429 MRPL13Q9BYD1 178 aaKnown RBP2.6□□□□□ -1.99
HMGB1P27-201ENST00000431429 BARHL1Q9BZE3 327 aa2.6□□□□□ -1.99
HMGB1P27-201ENST00000431429 ROPN1Q9HAT0 212 aaPredicted RBP2.6□□□□□ -1.99
HMGB1P27-201ENST00000431429 SLC25A19Q9HC21 320 aa2.6□□□□□ -1.99
HMGB1P27-201ENST00000431429 B3GAT2Q9NPZ5 323 aa2.6□□□□□ -1.99
HMGB1P27-201ENST00000431429 SPHK2Q9NRA0 654 aa2.6□□□□□ -1.99
HMGB1P27-201ENST00000431429 ZNF446Q9NWS9 450 aa2.6□□□□□ -1.99
HMGB1P27-201ENST00000431429 THYN1Q9P016 225 aa2.6□□□□□ -1.99
HMGB1P27-201ENST00000431429 ATXN10Q9UBB4 475 aa2.6□□□□□ -1.99
HMGB1P27-201ENST00000431429 MBD2Q9UBB5 411 aa2.6□□□□□ -1.99
HMGB1P27-201ENST00000431429 TUBGCP4Q9UGJ1 667 aa2.6□□□□□ -1.99
HMGB1P27-201ENST00000431429 SPATA2Q9UM82 520 aa2.6□□□□□ -1.99
HMGB1P27-201ENST00000431429 AURKCQ9UQB9 309 aa2.6□□□□□ -1.99
HMGB1P27-201ENST00000431429 EXOGQ9Y2C4 368 aaKnown RBP2.6□□□□□ -1.99
HMGB1P27-201ENST00000431429 SLC6A5Q9Y345 797 aa2.6□□□□□ -1.99
HMGB1P27-201ENST00000431429 PARD3Q8TEW0 1356 aa2.6□□□□□ -1.99
HMGB1P27-201ENST00000431429 ROBO1Q9Y6N7 1651 aa2.6□□□□□ -1.99
HMGB1P27-201ENST00000431429 PTCH1Q13635 1447 aa2.59□□□□□ -1.99
HMGB1P27-201ENST00000431429 SUPT6HQ7KZ85 1726 aaKnown RBP2.59□□□□□ -1.99
HMGB1P27-201ENST00000431429 NKTRP30414 1462 aaKnown RBP2.59□□□□□ -1.99
HMGB1P27-201ENST00000431429 A0A0U1RQV5 110 aa2.59□□□□□ -1.99
HMGB1P27-201ENST00000431429 BCLAF3A2AJT9 711 aaKnown RBP2.59□□□□□ -1.99
HMGB1P27-201ENST00000431429 FBP2O00757 339 aa2.59□□□□□ -1.99
HMGB1P27-201ENST00000431429 ANGPT2O15123 496 aa2.59□□□□□ -1.99
HMGB1P27-201ENST00000431429 CLDN3O15551 220 aa2.59□□□□□ -1.99
HMGB1P27-201ENST00000431429 DUS4LO95620 317 aaKnown RBP2.59□□□□□ -1.99
HMGB1P27-201ENST00000431429 DIRAS3O95661 229 aa2.59□□□□□ -1.99
HMGB1P27-201ENST00000431429 GUCA1CO95843 209 aa2.59□□□□□ -1.99
HMGB1P27-201ENST00000431429 CALCAP01258 141 aa2.59□□□□□ -1.99
HMGB1P27-201ENST00000431429 KRT8P05787 483 aa2.59□□□□□ -1.99
HMGB1P27-201ENST00000431429 LYNP07948 512 aa2.59□□□□□ -1.99
HMGB1P27-201ENST00000431429 CYP11B1P15538 503 aa2.59□□□□□ -1.99
HMGB1P27-201ENST00000431429 POLR2FP61218 127 aaKnown RBP2.59□□□□□ -1.99
HMGB1P27-201ENST00000431429 IDI1Q13907 227 aa2.59□□□□□ -1.99
HMGB1P27-201ENST00000431429 ZKSCAN8Q15776 578 aaPredicted RBP2.59□□□□□ -1.99
HMGB1P27-201ENST00000431429 HKDC1Q2TB90 917 aa2.59□□□□□ -1.99
HMGB1P27-201ENST00000431429 ADPRMQ3LIE5 342 aa2.59□□□□□ -1.99
HMGB1P27-201ENST00000431429 ZC2HC1BQ5TFG8 222 aa2.59□□□□□ -1.99
HMGB1P27-201ENST00000431429 BSPRYQ5W0U4 402 aa2.59□□□□□ -1.99
HMGB1P27-201ENST00000431429 ATRAIDQ6UW56 229 aa2.59□□□□□ -1.99
HMGB1P27-201ENST00000431429 ARSKQ6UWY0 536 aa2.59□□□□□ -1.99
HMGB1P27-201ENST00000431429 ABRAXAS1Q6UWZ7 409 aa2.59□□□□□ -1.99
HMGB1P27-201ENST00000431429 DPY19L2P2Q6ZN68 376 aa2.59□□□□□ -1.99
HMGB1P27-201ENST00000431429 WDSUB1Q8N9V3 476 aa2.59□□□□□ -1.99
HMGB1P27-201ENST00000431429 AQP11Q8NBQ7 271 aa2.59□□□□□ -1.99
HMGB1P27-201ENST00000431429 RELL2Q8NC24 303 aaPredicted RBP2.59□□□□□ -1.99
HMGB1P27-201ENST00000431429 NFAM1Q8NET5 270 aaPredicted RBP2.59□□□□□ -1.99
HMGB1P27-201ENST00000431429 OR2T6Q8NHC8 308 aa2.59□□□□□ -1.99
HMGB1P27-201ENST00000431429 FLVCR1-AS1Q8TAF5 88 aa2.59□□□□□ -1.99
HMGB1P27-201ENST00000431429 AGAP4Q96P64 663 aa2.59□□□□□ -1.99
HMGB1P27-201ENST00000431429 RCHY1Q96PM5 261 aa2.59□□□□□ -1.99
HMGB1P27-201ENST00000431429 TESK2Q96S53 571 aa2.59□□□□□ -1.99
HMGB1P27-201ENST00000431429 CPXM1Q96SM3 734 aa2.59□□□□□ -1.99
HMGB1P27-201ENST00000431429 LGMNQ99538 433 aa2.59□□□□□ -1.99
HMGB1P27-201ENST00000431429 GPA33Q99795 319 aa2.59□□□□□ -1.99
HMGB1P27-201ENST00000431429 OPRPNQ99935 248 aaPredicted RBP2.59□□□□□ -1.99
HMGB1P27-201ENST00000431429 ST6GALNAC5Q9BVH7 336 aa2.59□□□□□ -1.99
HMGB1P27-201ENST00000431429 DGCR6LQ9BY27 220 aa2.59□□□□□ -1.99
HMGB1P27-201ENST00000431429 FGFBP2Q9BYJ0 223 aa2.59□□□□□ -1.99
HMGB1P27-201ENST00000431429 NLNQ9BYT8 704 aa2.59□□□□□ -1.99
HMGB1P27-201ENST00000431429 Q9HAA7 133 aa2.59□□□□□ -1.99
HMGB1P27-201ENST00000431429 PLEKHA3Q9HB20 300 aa2.59□□□□□ -1.99
HMGB1P27-201ENST00000431429 ZDHHC18Q9NUE0 388 aa2.59□□□□□ -1.99
HMGB1P27-201ENST00000431429 TEX10Q9NXF1 929 aaPredicted RBP2.59□□□□□ -1.99
HMGB1P27-201ENST00000431429 ANKMY1Q9P2S6 941 aa2.59□□□□□ -1.99
HMGB1P27-201ENST00000431429 ERVK-18Q9QC07 812 aa2.59□□□□□ -1.99
HMGB1P27-201ENST00000431429 ZNF490Q9ULM2 529 aaPredicted RBP2.59□□□□□ -1.99
HMGB1P27-201ENST00000431429 FOXJ3Q9UPW0 622 aa2.59□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 87.1 ms