RNA–Protein interactions for RNA: ENST00000430158.5

USP40-205, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 3

Gene USP40, Length 1,047 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-205ENST00000430158 ENTPD4Q9Y227 616 aa11.52□□□□□ -0.57
USP40-205ENST00000430158 DTX4Q9Y2E6 619 aa11.52□□□□□ -0.57
USP40-205ENST00000430158 OR6C76A6NM76 312 aa11.51□□□□□ -0.57
USP40-205ENST00000430158 A8MUI8 341 aa11.51□□□□□ -0.57
USP40-205ENST00000430158 C9JVG2 144 aa11.51□□□□□ -0.57
USP40-205ENST00000430158 E9PBE3 544 aa11.51□□□□□ -0.57
USP40-205ENST00000430158 UPK1AO00322 258 aa11.51□□□□□ -0.57
USP40-205ENST00000430158 KLHL41O60662 606 aa11.51□□□□□ -0.57
USP40-205ENST00000430158 SLITRK5O94991 958 aa11.51□□□□□ -0.57
USP40-205ENST00000430158 VIMP08670 466 aaKnown RBP11.51□□□□□ -0.57
USP40-205ENST00000430158 EFNA1P20827 205 aaPredicted RBP11.51□□□□□ -0.57
USP40-205ENST00000430158 DRD4P21917 467 aa11.51□□□□□ -0.57
USP40-205ENST00000430158 NTSP30990 170 aa11.51□□□□□ -0.57
USP40-205ENST00000430158 LSP1P33241 339 aa11.51□□□□□ -0.57
USP40-205ENST00000430158 TRHRP34981 398 aaPredicted RBP11.51□□□□□ -0.57
USP40-205ENST00000430158 MAP3K8P41279 467 aa11.51□□□□□ -0.57
USP40-205ENST00000430158 CDK9P50750 372 aaKnown RBP11.51□□□□□ -0.57
USP40-205ENST00000430158 SEC24CP53992 1094 aa11.51□□□□□ -0.57
USP40-205ENST00000430158 NME5P56597 212 aa11.51□□□□□ -0.57
USP40-205ENST00000430158 EXOSC7Q15024 291 aaKnown RBP11.51□□□□□ -0.57
USP40-205ENST00000430158 EBPQ15125 230 aaKnown RBP11.51□□□□□ -0.57
USP40-205ENST00000430158 SPANXN4Q5MJ08 99 aa11.51□□□□□ -0.57
USP40-205ENST00000430158 EXOSC6Q5RKV6 272 aaKnown RBP11.51□□□□□ -0.57
USP40-205ENST00000430158 ZNF468Q5VIY5 522 aaPredicted RBP11.51□□□□□ -0.57
USP40-205ENST00000430158 ACAD11Q709F0 780 aa11.51□□□□□ -0.57
USP40-205ENST00000430158 BEST3Q8N1M1 668 aa11.51□□□□□ -0.57
USP40-205ENST00000430158 OR9I1Q8NGQ6 314 aa11.51□□□□□ -0.57
USP40-205ENST00000430158 C16orf52Q8NHV5 167 aa11.51□□□□□ -0.57
USP40-205ENST00000430158 HAS2Q92819 552 aa11.51□□□□□ -0.57
USP40-205ENST00000430158 ZBED6CLQ96FA7 236 aaPredicted RBP11.51□□□□□ -0.57
USP40-205ENST00000430158 CHMP6Q96FZ7 201 aa11.51□□□□□ -0.57
USP40-205ENST00000430158 ZNF354BQ96LW1 612 aa11.51□□□□□ -0.57
USP40-205ENST00000430158 ARHGAP9Q9BRR9 750 aa11.51□□□□□ -0.57
USP40-205ENST00000430158 DUSP26Q9BV47 211 aa11.51□□□□□ -0.57
USP40-205ENST00000430158 TMEM120AQ9BXJ8 343 aa11.51□□□□□ -0.57
USP40-205ENST00000430158 DPY30Q9C005 99 aa11.51□□□□□ -0.57
USP40-205ENST00000430158 SLC25A18Q9H1K4 315 aa11.51□□□□□ -0.57
USP40-205ENST00000430158 CDCP1Q9H5V8 836 aa11.51□□□□□ -0.57
USP40-205ENST00000430158 LIN28AQ9H9Z2 209 aaKnown RBP11.51□□□□□ -0.57
USP40-205ENST00000430158 ZNF71Q9NQZ8 489 aaPredicted RBP11.51□□□□□ -0.57
USP40-205ENST00000430158 STMN3Q9NZ72 180 aa11.51□□□□□ -0.57
USP40-205ENST00000430158 MYOTQ9UBF9 498 aa11.51□□□□□ -0.57
USP40-205ENST00000430158 G3BP2Q9UN86 482 aaKnown RBP11.51□□□□□ -0.57
USP40-205ENST00000430158 C19orf53Q9UNZ5 99 aaPredicted RBP11.51□□□□□ -0.57
USP40-205ENST00000430158 MAPRE3Q9UPY8 281 aa11.51□□□□□ -0.57
USP40-205ENST00000430158 ZNF451Q9Y4E5 1061 aa11.51□□□□□ -0.57
USP40-205ENST00000430158 CSAG2Q9Y5P2 127 aa11.51□□□□□ -0.57
USP40-205ENST00000430158 COPG1Q9Y678 874 aaKnown RBP11.51□□□□□ -0.57
USP40-205ENST00000430158 SHANK1Q9Y566 2161 aa11.51□□□□□ -0.57
USP40-205ENST00000430158 POLEQ07864 2286 aa11.51□□□□□ -0.57
USP40-205ENST00000430158 GIMAP1-GIMAP5A0A087WTJ2 511 aa11.5□□□□□ -0.57
USP40-205ENST00000430158 POLR3GO15318 223 aaPredicted RBP11.5□□□□□ -0.57
USP40-205ENST00000430158 NME6O75414 186 aaPredicted RBP11.5□□□□□ -0.57
USP40-205ENST00000430158 WDPCPO95876 746 aa11.5□□□□□ -0.57
USP40-205ENST00000430158 MC3RP41968 323 aa11.5□□□□□ -0.57
USP40-205ENST00000430158 ATP4BP51164 291 aa11.5□□□□□ -0.57
USP40-205ENST00000430158 DGKQP52824 942 aa11.5□□□□□ -0.57
USP40-205ENST00000430158 CLNS1AP54105 237 aaKnown RBP11.5□□□□□ -0.57
USP40-205ENST00000430158 SRSF11Q05519 484 aaKnown RBP11.5□□□□□ -0.57
USP40-205ENST00000430158 MEP1AQ16819 746 aa11.5□□□□□ -0.57
USP40-205ENST00000430158 LACTB2Q53H82 288 aaPredicted RBP11.5□□□□□ -0.57
USP40-205ENST00000430158 PIGGQ5H8A4 983 aa11.5□□□□□ -0.57
USP40-205ENST00000430158 OR4F3Q6IEY1 312 aa11.5□□□□□ -0.57
USP40-205ENST00000430158 PAOXQ6QHF9 649 aa11.5□□□□□ -0.57
USP40-205ENST00000430158 RNF111Q6ZNA4 994 aa11.5□□□□□ -0.57
USP40-205ENST00000430158 LINC00696Q6ZRV3 163 aa11.5□□□□□ -0.57
USP40-205ENST00000430158 ASB18Q6ZVZ8 466 aa11.5□□□□□ -0.57
USP40-205ENST00000430158 SLC5A8Q8N695 610 aa11.5□□□□□ -0.57
USP40-205ENST00000430158 NATD1Q8N6N6 113 aa11.5□□□□□ -0.57
USP40-205ENST00000430158 GLB1L3Q8NCI6 653 aaPredicted RBP11.5□□□□□ -0.57
USP40-205ENST00000430158 C17orf47Q8NEP4 570 aa11.5□□□□□ -0.57
USP40-205ENST00000430158 OR52R1Q8NGF1 315 aa11.5□□□□□ -0.57
USP40-205ENST00000430158 THAP3Q8WTV1 239 aaPredicted RBP11.5□□□□□ -0.57
USP40-205ENST00000430158 C10orf82Q8WW14 230 aa11.5□□□□□ -0.57
USP40-205ENST00000430158 OR5P2Q8WZ92 322 aa11.5□□□□□ -0.57
USP40-205ENST00000430158 GIMAP5Q96F15 307 aa11.5□□□□□ -0.57
USP40-205ENST00000430158 VSTM2LQ96N03 204 aa11.5□□□□□ -0.57
USP40-205ENST00000430158 PRPF18Q99633 342 aaKnown RBP11.5□□□□□ -0.57
USP40-205ENST00000430158 WWTR1Q9GZV5 400 aa11.5□□□□□ -0.57
USP40-205ENST00000430158 SERHLQ9NQF3 203 aa11.5□□□□□ -0.57
USP40-205ENST00000430158 ATAD3AQ9NVI7 634 aa11.5□□□□□ -0.57
USP40-205ENST00000430158 PLA2G3Q9NZ20 509 aa11.5□□□□□ -0.57
USP40-205ENST00000430158 KLHL14Q9P2G3 628 aa11.5□□□□□ -0.57
USP40-205ENST00000430158 COPS7AQ9UBW8 275 aa11.5□□□□□ -0.57
USP40-205ENST00000430158 A0A0G2JND7 137 aa11.49□□□□□ -0.57
USP40-205ENST00000430158 PRSS51A0A1B0GVH4 220 aa11.49□□□□□ -0.57
USP40-205ENST00000430158 A0A1W2PRB8 838 aa11.49□□□□□ -0.57
USP40-205ENST00000430158 RNASET2O00584 256 aaKnown RBP11.49□□□□□ -0.57
USP40-205ENST00000430158 CDK2AP1O14519 115 aa11.49□□□□□ -0.57
USP40-205ENST00000430158 DYRK3O43781 588 aa11.49□□□□□ -0.57
USP40-205ENST00000430158 SLC22A3O75751 556 aa11.49□□□□□ -0.57
USP40-205ENST00000430158 OR2J2O76002 312 aa11.49□□□□□ -0.57
USP40-205ENST00000430158 C6orf47O95873 294 aa11.49□□□□□ -0.57
USP40-205ENST00000430158 ALPPP05187 535 aa11.49□□□□□ -0.57
USP40-205ENST00000430158 SFTPCP11686 197 aa11.49□□□□□ -0.57
USP40-205ENST00000430158 CD96P40200 585 aa11.49□□□□□ -0.57
USP40-205ENST00000430158 KIR3DL1P43629 444 aa11.49□□□□□ -0.57
USP40-205ENST00000430158 ST13P50502 369 aaKnown RBP11.49□□□□□ -0.57
USP40-205ENST00000430158 MANFP55145 182 aaKnown RBP11.49□□□□□ -0.57
USP40-205ENST00000430158 HBA1P69905 142 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms