RNA–Protein interactions for RNA: ENST00000429895.5

PTPRF-206, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 1 (best)

Gene PTPRF, Length 6,312 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-206ENST00000429895 RAC2P15153 192 aa14.68□□□□□ -0.06
PTPRF-206ENST00000429895 ACTC1P68032 377 aa14.68□□□□□ -0.06
PTPRF-206ENST00000429895 ACTA1P68133 377 aa14.68□□□□□ -0.06
PTPRF-206ENST00000429895 APOFQ13790 326 aa14.68□□□□□ -0.06
PTPRF-206ENST00000429895 STK11Q15831 433 aa14.68□□□□□ -0.06
PTPRF-206ENST00000429895 KANK2Q63ZY3 851 aa14.68□□□□□ -0.06
PTPRF-206ENST00000429895 SHFQ7M4L6 423 aa14.68□□□□□ -0.06
PTPRF-206ENST00000429895 KLHDC8AQ8IYD2 350 aa14.68□□□□□ -0.06
PTPRF-206ENST00000429895 TM9SF4Q92544 642 aa14.68□□□□□ -0.06
PTPRF-206ENST00000429895 NID2Q14112 1375 aa14.67□□□□□ -0.06
PTPRF-206ENST00000429895 FAM171A2A8MVW0 826 aa14.67□□□□□ -0.06
PTPRF-206ENST00000429895 HTRA2O43464 458 aaPredicted RBP14.67□□□□□ -0.06
PTPRF-206ENST00000429895 GPR32O75388 356 aa14.67□□□□□ -0.06
PTPRF-206ENST00000429895 RGS9O75916 674 aaPredicted RBP14.67□□□□□ -0.06
PTPRF-206ENST00000429895 PRSS56P0CW18 603 aa14.67□□□□□ -0.06
PTPRF-206ENST00000429895 PLEKHN1Q494U1 663 aaPredicted RBP14.67□□□□□ -0.06
PTPRF-206ENST00000429895 UNC50Q53HI1 259 aa14.67□□□□□ -0.06
PTPRF-206ENST00000429895 TECRLQ5HYJ1 363 aa14.67□□□□□ -0.06
PTPRF-206ENST00000429895 RPL13AP3Q6NVV1 102 aa14.67□□□□□ -0.06
PTPRF-206ENST00000429895 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.67□□□□□ -0.06
PTPRF-206ENST00000429895 UEVLDQ8IX04 471 aa14.67□□□□□ -0.06
PTPRF-206ENST00000429895 RPLP0P6Q8NHW5 317 aa14.67□□□□□ -0.06
PTPRF-206ENST00000429895 HHIPQ96QV1 700 aa14.67□□□□□ -0.06
PTPRF-206ENST00000429895 RBM24Q9BX46 236 aaKnown RBP14.67□□□□□ -0.06
PTPRF-206ENST00000429895 HSD3B7Q9H2F3 369 aa14.67□□□□□ -0.06
PTPRF-206ENST00000429895 LIPT1Q9Y234 373 aa14.67□□□□□ -0.06
PTPRF-206ENST00000429895 INMT-MINDY4F8WBC2 141 aa14.67□□□□□ -0.06
PTPRF-206ENST00000429895 M0R233 179 aa14.67□□□□□ -0.06
PTPRF-206ENST00000429895 SCAMP2O15127 329 aaKnown RBP14.67□□□□□ -0.06
PTPRF-206ENST00000429895 MAFKO60675 156 aa14.67□□□□□ -0.06
PTPRF-206ENST00000429895 APBB3O95704 486 aa14.67□□□□□ -0.06
PTPRF-206ENST00000429895 PPA1Q15181 289 aa14.67□□□□□ -0.06
PTPRF-206ENST00000429895 OR9K2Q8NGE7 335 aa14.67□□□□□ -0.06
PTPRF-206ENST00000429895 OR8J3Q8NGG0 315 aa14.67□□□□□ -0.06
PTPRF-206ENST00000429895 ACAD8Q9UKU7 415 aa14.67□□□□□ -0.06
PTPRF-206ENST00000429895 ZNF705EA8MWA4 302 aaPredicted RBP14.67□□□□□ -0.06
PTPRF-206ENST00000429895 H3BML4 177 aa14.67□□□□□ -0.06
PTPRF-206ENST00000429895 S1PR4O95977 384 aa14.67□□□□□ -0.06
PTPRF-206ENST00000429895 CD53P19397 219 aa14.67□□□□□ -0.06
PTPRF-206ENST00000429895 METTL2AQ96IZ6 378 aaKnown RBP14.67□□□□□ -0.06
PTPRF-206ENST00000429895 F5H0A9 414 aaPredicted RBP14.67□□□□□ -0.06
PTPRF-206ENST00000429895 KLF11O14901 512 aa14.67□□□□□ -0.06
PTPRF-206ENST00000429895 ENDOUP21128 410 aaKnown RBP14.67□□□□□ -0.06
PTPRF-206ENST00000429895 SOX3P41225 446 aa14.67□□□□□ -0.06
PTPRF-206ENST00000429895 RABIFP47224 123 aa14.67□□□□□ -0.06
PTPRF-206ENST00000429895 TAS2R38P59533 333 aa14.67□□□□□ -0.06
PTPRF-206ENST00000429895 GRM7Q14831 915 aa14.67□□□□□ -0.06
PTPRF-206ENST00000429895 SLC16A9Q7RTY1 509 aa14.67□□□□□ -0.06
PTPRF-206ENST00000429895 TMEM130Q8N3G9 435 aa14.67□□□□□ -0.06
PTPRF-206ENST00000429895 CHST14Q8NCH0 376 aa14.67□□□□□ -0.06
PTPRF-206ENST00000429895 FOXJ1Q92949 421 aa14.67□□□□□ -0.06
PTPRF-206ENST00000429895 FAM46BQ96A09 425 aa14.67□□□□□ -0.06
PTPRF-206ENST00000429895 PLEKHA3Q9HB20 300 aa14.67□□□□□ -0.06
PTPRF-206ENST00000429895 GXYLT2A0PJZ3 443 aa14.67□□□□□ -0.06
PTPRF-206ENST00000429895 ANKRD28O15084 1053 aa14.67□□□□□ -0.06
PTPRF-206ENST00000429895 TOXO94900 526 aa14.67□□□□□ -0.06
PTPRF-206ENST00000429895 TMEM225BP0DP42 221 aa14.67□□□□□ -0.06
PTPRF-206ENST00000429895 AKR1C2P52895 323 aa14.67□□□□□ -0.06
PTPRF-206ENST00000429895 HACD2Q6Y1H2 254 aa14.67□□□□□ -0.06
PTPRF-206ENST00000429895 TAS1R3Q7RTX0 852 aa14.67□□□□□ -0.06
PTPRF-206ENST00000429895 GLYATL2Q8WU03 294 aa14.67□□□□□ -0.06
PTPRF-206ENST00000429895 ZUFSPQ96AP4 578 aa14.67□□□□□ -0.06
PTPRF-206ENST00000429895 HS6ST2Q96MM7 605 aa14.67□□□□□ -0.06
PTPRF-206ENST00000429895 RANBP3Q9H6Z4 567 aaPredicted RBP14.67□□□□□ -0.06
PTPRF-206ENST00000429895 ACTL7AQ9Y615 435 aa14.67□□□□□ -0.06
PTPRF-206ENST00000429895 TNFSF12-TNFSF13A0A0A6YY99 330 aa14.66□□□□□ -0.06
PTPRF-206ENST00000429895 TVP23AA6NH52 213 aa14.66□□□□□ -0.06
PTPRF-206ENST00000429895 EEF1E1-BLOC1S5C9J1V9 151 aa14.66□□□□□ -0.06
PTPRF-206ENST00000429895 TNFSF12O43508 249 aa14.66□□□□□ -0.06
PTPRF-206ENST00000429895 NDUFV2P19404 249 aa14.66□□□□□ -0.06
PTPRF-206ENST00000429895 KCNAB2Q13303 367 aa14.66□□□□□ -0.06
PTPRF-206ENST00000429895 OR4D1Q15615 310 aa14.66□□□□□ -0.06
PTPRF-206ENST00000429895 RPS26P11Q5JNZ5 115 aaPredicted RBP14.66□□□□□ -0.06
PTPRF-206ENST00000429895 CLECL1Q8IZS7 167 aa14.66□□□□□ -0.06
PTPRF-206ENST00000429895 SLC2A13Q96QE2 648 aa14.66□□□□□ -0.06
PTPRF-206ENST00000429895 SNED1Q8TER0 1413 aa14.66□□□□□ -0.06
PTPRF-206ENST00000429895 ZNF217O75362 1048 aa14.66□□□□□ -0.06
PTPRF-206ENST00000429895 HTR3BO95264 441 aa14.66□□□□□ -0.06
PTPRF-206ENST00000429895 EPHA1P21709 976 aa14.66□□□□□ -0.06
PTPRF-206ENST00000429895 TRAM1Q15629 374 aa14.66□□□□□ -0.06
PTPRF-206ENST00000429895 ATP6AP1Q15904 470 aa14.66□□□□□ -0.06
PTPRF-206ENST00000429895 SERINC5Q86VE9 423 aa14.66□□□□□ -0.06
PTPRF-206ENST00000429895 ADAMTS10Q9H324 1103 aa14.66□□□□□ -0.06
PTPRF-206ENST00000429895 LMAN1LQ9HAT1 526 aa14.66□□□□□ -0.06
PTPRF-206ENST00000429895 LOC105378220A0A1B0GUY1 285 aaPredicted RBP14.66□□□□□ -0.06
PTPRF-206ENST00000429895 ARG2P78540 354 aa14.66□□□□□ -0.06
PTPRF-206ENST00000429895 COL28A1Q2UY09 1125 aa14.66□□□□□ -0.06
PTPRF-206ENST00000429895 PEX13Q92968 403 aa14.66□□□□□ -0.06
PTPRF-206ENST00000429895 FAM210AQ96ND0 272 aa14.66□□□□□ -0.06
PTPRF-206ENST00000429895 LMF1Q96S06 567 aa14.66□□□□□ -0.06
PTPRF-206ENST00000429895 BOCQ9BWV1 1114 aa14.66□□□□□ -0.06
PTPRF-206ENST00000429895 A0A1W2PPW3 197 aa14.66□□□□□ -0.06
PTPRF-206ENST00000429895 H3BQ06 376 aaPredicted RBP14.66□□□□□ -0.06
PTPRF-206ENST00000429895 RAD1O60671 282 aa14.66□□□□□ -0.06
PTPRF-206ENST00000429895 ZNF43P17038 809 aa14.66□□□□□ -0.06
PTPRF-206ENST00000429895 BPIP17213 487 aa14.66□□□□□ -0.06
PTPRF-206ENST00000429895 EPHA4P54764 986 aa14.66□□□□□ -0.06
PTPRF-206ENST00000429895 GCDHQ92947 438 aaPredicted RBP14.66□□□□□ -0.06
PTPRF-206ENST00000429895 LPAR4Q99677 370 aa14.66□□□□□ -0.06
PTPRF-206ENST00000429895 MTG2Q9H4K7 406 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms