RNA–Protein interactions for RNA: ENST00000429738.1

MRPL28-203, Transcript of mitochondrial ribosomal protein L28, human

TSL 2 BASIC

Gene MRPL28, Length 310 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MRPL28-203	ENST00000429738	FAM215A	Q9Y5M1	114 aa		16.28	■□□□□ 0.2
MRPL28-203	ENST00000429738	NPFFR2	Q9Y5X5	522 aa		16.28	■□□□□ 0.2
MRPL28-203	ENST00000429738	FIGNL2	A6NMB9	653 aa		16.27	■□□□□ 0.2
MRPL28-203	ENST00000429738	FAM90A27P	A6NNH2	459 aa		16.27	■□□□□ 0.2
MRPL28-203	ENST00000429738	MANBA	O00462	879 aa		16.27	■□□□□ 0.2
MRPL28-203	ENST00000429738	TRIM3	O75382	744 aa	Predicted RBP	16.27	■□□□□ 0.2
MRPL28-203	ENST00000429738	GSTA1	P08263	222 aa		16.27	■□□□□ 0.2
MRPL28-203	ENST00000429738	HOXB4	P17483	251 aa	Predicted RBP	16.27	■□□□□ 0.2
MRPL28-203	ENST00000429738	NT5E	P21589	574 aa		16.27	■□□□□ 0.2
MRPL28-203	ENST00000429738	ACVR2A	P27037	513 aa		16.27	■□□□□ 0.2
MRPL28-203	ENST00000429738	IST1	P53990	364 aa		16.27	■□□□□ 0.2
MRPL28-203	ENST00000429738	PRKAA2	P54646	552 aa		16.27	■□□□□ 0.2
MRPL28-203	ENST00000429738	KCNJ2	P63252	427 aa		16.27	■□□□□ 0.2
MRPL28-203	ENST00000429738	PMPCA	Q10713	525 aa		16.27	■□□□□ 0.2
MRPL28-203	ENST00000429738	CSTF3	Q12996	717 aa	Known RBP	16.27	■□□□□ 0.2
MRPL28-203	ENST00000429738	TBCEL	Q5QJ74	424 aa		16.27	■□□□□ 0.2
MRPL28-203	ENST00000429738	TMEM64	Q6YI46	380 aa		16.27	■□□□□ 0.2
MRPL28-203	ENST00000429738	ACAD11	Q709F0	780 aa		16.27	■□□□□ 0.2
MRPL28-203	ENST00000429738	TMEM200A	Q86VY9	491 aa		16.27	■□□□□ 0.2
MRPL28-203	ENST00000429738	SLC22A9	Q8IVM8	553 aa		16.27	■□□□□ 0.2
MRPL28-203	ENST00000429738	VWA5B2	Q8N398	1253 aa		16.27	■□□□□ 0.2
MRPL28-203	ENST00000429738	C1orf52	Q8N6N3	182 aa	Known RBP	16.27	■□□□□ 0.2
MRPL28-203	ENST00000429738	OR5M9	Q8NGP3	310 aa		16.27	■□□□□ 0.2
MRPL28-203	ENST00000429738	OR5M3	Q8NGP4	307 aa		16.27	■□□□□ 0.2
MRPL28-203	ENST00000429738	SARAF	Q96BY9	339 aa		16.27	■□□□□ 0.2
MRPL28-203	ENST00000429738	CTHRC1	Q96CG8	243 aa		16.27	■□□□□ 0.2
MRPL28-203	ENST00000429738	L3HYPDH	Q96EM0	354 aa		16.27	■□□□□ 0.2
MRPL28-203	ENST00000429738	ZNF681	Q96N22	645 aa		16.27	■□□□□ 0.2
MRPL28-203	ENST00000429738	SECISBP2	Q96T21	854 aa	Known RBP	16.27	■□□□□ 0.2
MRPL28-203	ENST00000429738	DOHH	Q9BU89	302 aa		16.27	■□□□□ 0.2
MRPL28-203	ENST00000429738	SLC24A3	Q9HC58	644 aa		16.27	■□□□□ 0.2
MRPL28-203	ENST00000429738	MAT2B	Q9NZL9	334 aa		16.27	■□□□□ 0.2
MRPL28-203	ENST00000429738	PSMC3IP	Q9P2W1	217 aa	Predicted RBP	16.27	■□□□□ 0.2
MRPL28-203	ENST00000429738	SPRR3	Q9UBC9	169 aa		16.27	■□□□□ 0.2
MRPL28-203	ENST00000429738	DTX4	Q9Y2E6	619 aa		16.27	■□□□□ 0.2
MRPL28-203	ENST00000429738	TRGV5	A0A0B4J1U4	118 aa		16.26	■□□□□ 0.19
MRPL28-203	ENST00000429738	GOLGA6L10	A6NI86	522 aa		16.26	■□□□□ 0.19
MRPL28-203	ENST00000429738	CAPN14	A8MX76	684 aa		16.26	■□□□□ 0.19
MRPL28-203	ENST00000429738	TP53I11	O14683	189 aa		16.26	■□□□□ 0.19
MRPL28-203	ENST00000429738	WDR1	O75083	606 aa		16.26	■□□□□ 0.19
MRPL28-203	ENST00000429738	KRT6A	P02538	564 aa		16.26	■□□□□ 0.19
MRPL28-203	ENST00000429738	KRT6B	P04259	564 aa		16.26	■□□□□ 0.19
MRPL28-203	ENST00000429738	RHOXF2B	P0C7M4	288 aa		16.26	■□□□□ 0.19
MRPL28-203	ENST00000429738	GPX3	P22352	226 aa		16.26	■□□□□ 0.19
MRPL28-203	ENST00000429738	KRT6C	P48668	564 aa		16.26	■□□□□ 0.19
MRPL28-203	ENST00000429738	TMED10	P49755	219 aa	Known RBP	16.26	■□□□□ 0.19
MRPL28-203	ENST00000429738	FBXW4	P57775	412 aa		16.26	■□□□□ 0.19
MRPL28-203	ENST00000429738	DUSP2	Q05923	314 aa		16.26	■□□□□ 0.19
MRPL28-203	ENST00000429738	DUSP8	Q13202	625 aa		16.26	■□□□□ 0.19
MRPL28-203	ENST00000429738	HLA-DQA1	Q5Y7H0	255 aa		16.26	■□□□□ 0.19
MRPL28-203	ENST00000429738	ZNF585A	Q6P3V2	769 aa		16.26	■□□□□ 0.19
MRPL28-203	ENST00000429738	FAM111B	Q6SJ93	734 aa		16.26	■□□□□ 0.19
MRPL28-203	ENST00000429738	GPRIN3	Q6ZVF9	776 aa		16.26	■□□□□ 0.19
MRPL28-203	ENST00000429738	CCDC71	Q8IV32	467 aa	Predicted RBP	16.26	■□□□□ 0.19
MRPL28-203	ENST00000429738	SPPL2A	Q8TCT8	520 aa		16.26	■□□□□ 0.19
MRPL28-203	ENST00000429738	C11orf24	Q96F05	449 aa	Predicted RBP	16.26	■□□□□ 0.19
MRPL28-203	ENST00000429738	CNRIP1	Q96F85	164 aa	Predicted RBP	16.26	■□□□□ 0.19
MRPL28-203	ENST00000429738	FOXC2	Q99958	501 aa		16.26	■□□□□ 0.19
MRPL28-203	ENST00000429738	RHOXF2	Q9BQY4	288 aa		16.26	■□□□□ 0.19
MRPL28-203	ENST00000429738	TTYH2	Q9BSA4	534 aa		16.26	■□□□□ 0.19
MRPL28-203	ENST00000429738	LDAH	Q9H6V9	325 aa		16.26	■□□□□ 0.19
MRPL28-203	ENST00000429738	MCM8	Q9UJA3	840 aa		16.26	■□□□□ 0.19
MRPL28-203	ENST00000429738	PCDHGB3	Q9Y5G1	929 aa		16.26	■□□□□ 0.19
MRPL28-203	ENST00000429738	SERTM1	A2A2V5	107 aa		16.25	■□□□□ 0.19
MRPL28-203	ENST00000429738	GOLGA8R	I6L899	631 aa		16.25	■□□□□ 0.19
MRPL28-203	ENST00000429738	ULK1	O75385	1050 aa		16.25	■□□□□ 0.19
MRPL28-203	ENST00000429738	ERAL1	O75616	437 aa	Known RBP	16.25	■□□□□ 0.19
MRPL28-203	ENST00000429738	LRAT	O95237	230 aa		16.25	■□□□□ 0.19
MRPL28-203	ENST00000429738	CBX7	O95931	251 aa		16.25	■□□□□ 0.19
MRPL28-203	ENST00000429738	CHN1	P15882	459 aa		16.25	■□□□□ 0.19
MRPL28-203	ENST00000429738	CSNK2A2	P19784	350 aa	Predicted RBP	16.25	■□□□□ 0.19
MRPL28-203	ENST00000429738	ABCD3	P28288	659 aa		16.25	■□□□□ 0.19
MRPL28-203	ENST00000429738	FEN1	P39748	380 aa	Known RBP	16.25	■□□□□ 0.19
MRPL28-203	ENST00000429738	HTR6	P50406	440 aa		16.25	■□□□□ 0.19
MRPL28-203	ENST00000429738	NRG3	P56975	720 aa		16.25	■□□□□ 0.19
MRPL28-203	ENST00000429738	RAE1	P78406	368 aa	Known RBP	16.25	■□□□□ 0.19
MRPL28-203	ENST00000429738	LCP2	Q13094	533 aa		16.25	■□□□□ 0.19
MRPL28-203	ENST00000429738	C6orf163	Q5TEZ5	329 aa		16.25	■□□□□ 0.19
MRPL28-203	ENST00000429738	FNDC7	Q5VTL7	733 aa		16.25	■□□□□ 0.19
MRPL28-203	ENST00000429738	BICRAL	Q6AI39	1079 aa		16.25	■□□□□ 0.19
MRPL28-203	ENST00000429738	B3GNT6	Q6ZMB0	384 aa		16.25	■□□□□ 0.19
MRPL28-203	ENST00000429738	SH2D5	Q6ZV89	423 aa		16.25	■□□□□ 0.19
MRPL28-203	ENST00000429738	TGIF2LY	Q8IUE0	185 aa		16.25	■□□□□ 0.19
MRPL28-203	ENST00000429738	EIF1AD	Q8N9N8	165 aa	Known RBP	16.25	■□□□□ 0.19
MRPL28-203	ENST00000429738	LRRN4CL	Q8ND94	238 aa		16.25	■□□□□ 0.19
MRPL28-203	ENST00000429738	NEIL3	Q8TAT5	605 aa		16.25	■□□□□ 0.19
MRPL28-203	ENST00000429738	METTL6	Q8TCB7	284 aa		16.25	■□□□□ 0.19
MRPL28-203	ENST00000429738	NRGN	Q92686	78 aa		16.25	■□□□□ 0.19
MRPL28-203	ENST00000429738	DIO2	Q92813	273 aa		16.25	■□□□□ 0.19
MRPL28-203	ENST00000429738	FAIM2	Q9BWQ8	316 aa		16.25	■□□□□ 0.19
MRPL28-203	ENST00000429738	ANGPTL4	Q9BY76	406 aa		16.25	■□□□□ 0.19
MRPL28-203	ENST00000429738	ACPT	Q9BZG2	426 aa		16.25	■□□□□ 0.19
MRPL28-203	ENST00000429738	NXF5	Q9H1B4	397 aa	Known RBP	16.25	■□□□□ 0.19
MRPL28-203	ENST00000429738	CXXC4	Q9H2H0	198 aa		16.25	■□□□□ 0.19
MRPL28-203	ENST00000429738	UBQLN3	Q9H347	655 aa		16.25	■□□□□ 0.19
MRPL28-203	ENST00000429738	GSTO2	Q9H4Y5	243 aa		16.25	■□□□□ 0.19
MRPL28-203	ENST00000429738	HEY2	Q9UBP5	337 aa		16.25	■□□□□ 0.19
MRPL28-203	ENST00000429738	DCDC2	Q9UHG0	476 aa		16.25	■□□□□ 0.19
MRPL28-203	ENST00000429738	ACAD8	Q9UKU7	415 aa		16.25	■□□□□ 0.19
MRPL28-203	ENST00000429738	PSME2	Q9UL46	239 aa		16.25	■□□□□ 0.19

Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms