RNA–Protein interactions for RNA: ENST00000429440.5

CDC42BPA-206, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 2

Gene CDC42BPA, Length 2,501 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-206ENST00000429440 MBTD1Q05BQ5 628 aa8.42□□□□□ -1.06
CDC42BPA-206ENST00000429440 PEA15Q15121 130 aa8.42□□□□□ -1.06
CDC42BPA-206ENST00000429440 ZNF239Q16600 458 aaKnown RBP8.42□□□□□ -1.06
CDC42BPA-206ENST00000429440 TMEM255AQ5JRV8 349 aa8.42□□□□□ -1.06
CDC42BPA-206ENST00000429440 CERCAMQ5T4B2 595 aa8.42□□□□□ -1.06
CDC42BPA-206ENST00000429440 ATPAF1Q5TC12 328 aaPredicted RBP8.42□□□□□ -1.06
CDC42BPA-206ENST00000429440 MEDAGQ5VYS4 303 aa8.42□□□□□ -1.06
CDC42BPA-206ENST00000429440 DCAF15Q66K64 600 aa8.42□□□□□ -1.06
CDC42BPA-206ENST00000429440 KCTD11Q693B1 232 aa8.42□□□□□ -1.06
CDC42BPA-206ENST00000429440 NCBP2-AS2Q69YL0 99 aa8.42□□□□□ -1.06
CDC42BPA-206ENST00000429440 ZNF549Q6P9A3 640 aa8.42□□□□□ -1.06
CDC42BPA-206ENST00000429440 LRRN1Q6UXK5 716 aa8.42□□□□□ -1.06
CDC42BPA-206ENST00000429440 CASP12Q6UXS9 341 aa8.42□□□□□ -1.06
CDC42BPA-206ENST00000429440 MOB3CQ70IA8 216 aa8.42□□□□□ -1.06
CDC42BPA-206ENST00000429440 MCPH1Q8NEM0 835 aa8.42□□□□□ -1.06
CDC42BPA-206ENST00000429440 PROKR2Q8NFJ6 384 aa8.42□□□□□ -1.06
CDC42BPA-206ENST00000429440 OR10K1Q8NGX5 313 aa8.42□□□□□ -1.06
CDC42BPA-206ENST00000429440 OR56B4Q8NH76 319 aa8.42□□□□□ -1.06
CDC42BPA-206ENST00000429440 GPBAR1Q8TDU6 330 aa8.42□□□□□ -1.06
CDC42BPA-206ENST00000429440 TADA1Q96BN2 335 aa8.42□□□□□ -1.06
CDC42BPA-206ENST00000429440 MTFMTQ96DP5 389 aaKnown RBP8.42□□□□□ -1.06
CDC42BPA-206ENST00000429440 TSPAN17Q96FV3 270 aa8.42□□□□□ -1.06
CDC42BPA-206ENST00000429440 RHOVQ96L33 236 aa8.42□□□□□ -1.06
CDC42BPA-206ENST00000429440 ZNF354BQ96LW1 612 aa8.42□□□□□ -1.06
CDC42BPA-206ENST00000429440 ZIC5Q96T25 663 aa8.42□□□□□ -1.06
CDC42BPA-206ENST00000429440 EPYCQ99645 322 aa8.42□□□□□ -1.06
CDC42BPA-206ENST00000429440 THAP7Q9BT49 309 aaPredicted RBP8.42□□□□□ -1.06
CDC42BPA-206ENST00000429440 NIF3L1Q9GZT8 377 aa8.42□□□□□ -1.06
CDC42BPA-206ENST00000429440 TOLLIPQ9H0E2 274 aa8.42□□□□□ -1.06
CDC42BPA-206ENST00000429440 SLC38A1Q9H2H9 487 aa8.42□□□□□ -1.06
CDC42BPA-206ENST00000429440 C1orf109Q9NX04 203 aa8.42□□□□□ -1.06
CDC42BPA-206ENST00000429440 WWOXQ9NZC7 414 aa8.42□□□□□ -1.06
CDC42BPA-206ENST00000429440 ZNF624Q9P2J8 865 aaPredicted RBP8.42□□□□□ -1.06
CDC42BPA-206ENST00000429440 RCOR3Q9P2K3 495 aaPredicted RBP8.42□□□□□ -1.06
CDC42BPA-206ENST00000429440 ACSL6Q9UKU0 697 aa8.42□□□□□ -1.06
CDC42BPA-206ENST00000429440 IGKV6D-21A0A0A0MT36 114 aa8.41□□□□□ -1.06
CDC42BPA-206ENST00000429440 ZNF197O14709 1029 aa8.41□□□□□ -1.06
CDC42BPA-206ENST00000429440 IMPA2O14732 288 aa8.41□□□□□ -1.06
CDC42BPA-206ENST00000429440 SCN2BO60939 215 aa8.41□□□□□ -1.06
CDC42BPA-206ENST00000429440 RAB3DO95716 219 aa8.41□□□□□ -1.06
CDC42BPA-206ENST00000429440 EGFP01133 1207 aa8.41□□□□□ -1.06
CDC42BPA-206ENST00000429440 FABP3P05413 133 aa8.41□□□□□ -1.06
CDC42BPA-206ENST00000429440 ADRA2AP08913 450 aa8.41□□□□□ -1.06
CDC42BPA-206ENST00000429440 BPIP17213 487 aa8.41□□□□□ -1.06
CDC42BPA-206ENST00000429440 ERCC2P18074 760 aa8.41□□□□□ -1.06
CDC42BPA-206ENST00000429440 CNR1P21554 472 aa8.41□□□□□ -1.06
CDC42BPA-206ENST00000429440 ABCD3P28288 659 aa8.41□□□□□ -1.06
CDC42BPA-206ENST00000429440 DDTP30046 118 aa8.41□□□□□ -1.06
CDC42BPA-206ENST00000429440 RGS19P49795 217 aa8.41□□□□□ -1.06
CDC42BPA-206ENST00000429440 MAT1AQ00266 395 aaKnown RBP8.41□□□□□ -1.06
CDC42BPA-206ENST00000429440 SREBF2Q12772 1141 aa8.41□□□□□ -1.06
CDC42BPA-206ENST00000429440 RAB6CQ53S08 254 aa8.41□□□□□ -1.06
CDC42BPA-206ENST00000429440 ZNF648Q5T619 568 aaPredicted RBP8.41□□□□□ -1.06
CDC42BPA-206ENST00000429440 LIPNQ5VXI9 398 aa8.41□□□□□ -1.06
CDC42BPA-206ENST00000429440 TRNP1Q6NT89 227 aa8.41□□□□□ -1.06
CDC42BPA-206ENST00000429440 MSANTD2Q6P1R3 559 aa8.41□□□□□ -1.06
CDC42BPA-206ENST00000429440 VITQ6UXI7 678 aa8.41□□□□□ -1.06
CDC42BPA-206ENST00000429440 OR2L5Q8NG80 312 aa8.41□□□□□ -1.06
CDC42BPA-206ENST00000429440 SLAMF9Q96A28 289 aa8.41□□□□□ -1.06
CDC42BPA-206ENST00000429440 MISP3Q96FF7 219 aa8.41□□□□□ -1.06
CDC42BPA-206ENST00000429440 ZBTB45Q96K62 511 aaPredicted RBP8.41□□□□□ -1.06
CDC42BPA-206ENST00000429440 LRFN5Q96NI6 719 aa8.41□□□□□ -1.06
CDC42BPA-206ENST00000429440 KCNC2Q96PR1 638 aa8.41□□□□□ -1.06
CDC42BPA-206ENST00000429440 PCYT2Q99447 389 aa8.41□□□□□ -1.06
CDC42BPA-206ENST00000429440 LGMNQ99538 433 aa8.41□□□□□ -1.06
CDC42BPA-206ENST00000429440 TCF25Q9BQ70 676 aa8.41□□□□□ -1.06
CDC42BPA-206ENST00000429440 C7orf50Q9BRJ6 194 aaKnown RBP8.41□□□□□ -1.06
CDC42BPA-206ENST00000429440 POLDIP3Q9BY77 421 aaKnown RBP8.41□□□□□ -1.06
CDC42BPA-206ENST00000429440 XRN2Q9H0D6 950 aaKnown RBP eCLIP8.41□□□□□ -1.06
CDC42BPA-206ENST00000429440 RAB6CQ9H0N0 254 aa8.41□□□□□ -1.06
CDC42BPA-206ENST00000429440 R3HDMLQ9H3Y0 253 aa8.41□□□□□ -1.06
CDC42BPA-206ENST00000429440 RIMS4Q9H426 269 aaPredicted RBP8.41□□□□□ -1.06
CDC42BPA-206ENST00000429440 HEBP1Q9NRV9 189 aa8.41□□□□□ -1.06
CDC42BPA-206ENST00000429440 RASL12Q9NYN1 266 aa8.41□□□□□ -1.06
CDC42BPA-206ENST00000429440 CPA4Q9UI42 421 aa8.41□□□□□ -1.06
CDC42BPA-206ENST00000429440 TMEM200CA6NKL6 621 aa8.41□□□□□ -1.06
CDC42BPA-206ENST00000429440 AGAP14A8MT82 685 aa8.41□□□□□ -1.06
CDC42BPA-206ENST00000429440 BLOC1S5-TXNDC5H3BN57 136 aa8.41□□□□□ -1.06
CDC42BPA-206ENST00000429440 RFXAPO00287 272 aa8.41□□□□□ -1.06
CDC42BPA-206ENST00000429440 PPIHO43447 177 aaKnown RBP8.41□□□□□ -1.06
CDC42BPA-206ENST00000429440 UGDHO60701 494 aa8.41□□□□□ -1.06
CDC42BPA-206ENST00000429440 FZD7O75084 574 aa8.41□□□□□ -1.06
CDC42BPA-206ENST00000429440 CSO75390 466 aaKnown RBP8.41□□□□□ -1.06
CDC42BPA-206ENST00000429440 OR2A4O95047 310 aa8.41□□□□□ -1.06
CDC42BPA-206ENST00000429440 PIGRP01833 764 aa8.41□□□□□ -1.06
CDC42BPA-206ENST00000429440 ESR1P03372 595 aa8.41□□□□□ -1.06
CDC42BPA-206ENST00000429440 SEMG1P04279 462 aa8.41□□□□□ -1.06
CDC42BPA-206ENST00000429440 OR8U8P0C7N1 319 aa8.41□□□□□ -1.06
CDC42BPA-206ENST00000429440 NR2C1P13056 603 aa8.41□□□□□ -1.06
CDC42BPA-206ENST00000429440 HIST1H1BP16401 226 aaKnown RBP8.41□□□□□ -1.06
CDC42BPA-206ENST00000429440 IDH2P48735 452 aaKnown RBP8.41□□□□□ -1.06
CDC42BPA-206ENST00000429440 LHX1P48742 406 aa8.41□□□□□ -1.06
CDC42BPA-206ENST00000429440 GNG10P50151 68 aa8.41□□□□□ -1.06
CDC42BPA-206ENST00000429440 CTBP2P56545 445 aa8.41□□□□□ -1.06
CDC42BPA-206ENST00000429440 TDGQ13569 410 aa8.41□□□□□ -1.06
CDC42BPA-206ENST00000429440 C1DQ13901 141 aaKnown RBP8.41□□□□□ -1.06
CDC42BPA-206ENST00000429440 DLK2Q6UY11 383 aa8.41□□□□□ -1.06
CDC42BPA-206ENST00000429440 TRIM46Q7Z4K8 759 aa8.41□□□□□ -1.06
CDC42BPA-206ENST00000429440 C15orf54Q8N8G6 183 aa8.41□□□□□ -1.06
CDC42BPA-206ENST00000429440 OR6B3Q8NGW1 331 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms