RNA–Protein interactions for RNA: ENST00000429427.1

SSR4P1-202, Transcript of signal sequence receptor subunit 4 pseudogene 1, humanhuman

TSL 5 BASIC

Gene SSR4P1, Length 967 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4P1-202ENST00000429427 Q6ZSR9 355 aa16.65■□□□□ 0.26
SSR4P1-202ENST00000429427 ZCCHC23Q6ZST2 131 aa16.65■□□□□ 0.26
SSR4P1-202ENST00000429427 FAM47EQ6ZV65 393 aa16.65■□□□□ 0.26
SSR4P1-202ENST00000429427 DOLPP1Q86YN1 238 aa16.65■□□□□ 0.26
SSR4P1-202ENST00000429427 CCDC116Q8IYX3 515 aa16.65■□□□□ 0.26
SSR4P1-202ENST00000429427 TMEM251Q8N6I4 163 aa16.65■□□□□ 0.26
SSR4P1-202ENST00000429427 OR5M3Q8NGP4 307 aa16.65■□□□□ 0.26
SSR4P1-202ENST00000429427 OR9A2Q8NGT5 310 aa16.65■□□□□ 0.26
SSR4P1-202ENST00000429427 OR6Y1Q8NGX8 325 aa16.65■□□□□ 0.26
SSR4P1-202ENST00000429427 TP53INP1Q96A56 240 aa16.65■□□□□ 0.26
SSR4P1-202ENST00000429427 PHF12Q96QT6 1004 aa16.65■□□□□ 0.26
SSR4P1-202ENST00000429427 ITPAQ9BY32 194 aa16.65■□□□□ 0.26
SSR4P1-202ENST00000429427 DEFB127Q9H1M4 99 aa16.65■□□□□ 0.26
SSR4P1-202ENST00000429427 MID2Q9UJV3 735 aa16.65■□□□□ 0.26
SSR4P1-202ENST00000429427 DNAJC15Q9Y5T4 150 aa16.65■□□□□ 0.26
SSR4P1-202ENST00000429427 GTF3C1Q12789 2109 aa16.64■□□□□ 0.25
SSR4P1-202ENST00000429427 NPIPB8E9PQR5 432 aa16.64■□□□□ 0.25
SSR4P1-202ENST00000429427 AZIN1O14977 448 aa16.64■□□□□ 0.25
SSR4P1-202ENST00000429427 CDC40O60508 579 aaKnown RBP eCLIP16.64■□□□□ 0.25
SSR4P1-202ENST00000429427 P04436 131 aa16.64■□□□□ 0.25
SSR4P1-202ENST00000429427 RFPL3SP0C7P2 107 aa16.64■□□□□ 0.25
SSR4P1-202ENST00000429427 DDCP20711 480 aa16.64■□□□□ 0.25
SSR4P1-202ENST00000429427 PRPH2P23942 346 aa16.64■□□□□ 0.25
SSR4P1-202ENST00000429427 MAGEA5P43359 124 aa16.64■□□□□ 0.25
SSR4P1-202ENST00000429427 PER3P56645 1201 aa16.64■□□□□ 0.25
SSR4P1-202ENST00000429427 ZNF763Q0D2J5 394 aa16.64■□□□□ 0.25
SSR4P1-202ENST00000429427 HYAL4Q2M3T9 481 aa16.64■□□□□ 0.25
SSR4P1-202ENST00000429427 ARL13AQ5H913 290 aaPredicted RBP16.64■□□□□ 0.25
SSR4P1-202ENST00000429427 NOXRED1Q6NXP6 359 aa16.64■□□□□ 0.25
SSR4P1-202ENST00000429427 GK5Q6ZS86 529 aa16.64■□□□□ 0.25
SSR4P1-202ENST00000429427 PRR22Q8IZ63 422 aa16.64■□□□□ 0.25
SSR4P1-202ENST00000429427 FBXW8Q8N3Y1 598 aa16.64■□□□□ 0.25
SSR4P1-202ENST00000429427 FAM13CQ8NE31 585 aa16.64■□□□□ 0.25
SSR4P1-202ENST00000429427 C17orf47Q8NEP4 570 aa16.64■□□□□ 0.25
SSR4P1-202ENST00000429427 OR52R1Q8NGF1 315 aa16.64■□□□□ 0.25
SSR4P1-202ENST00000429427 ZNF675Q8TD23 568 aa16.64■□□□□ 0.25
SSR4P1-202ENST00000429427 KAT2AQ92830 837 aa16.64■□□□□ 0.25
SSR4P1-202ENST00000429427 NTNG2Q96CW9 530 aa16.64■□□□□ 0.25
SSR4P1-202ENST00000429427 EGLN2Q96KS0 407 aa16.64■□□□□ 0.25
SSR4P1-202ENST00000429427 TRMOQ9BU70 441 aa16.64■□□□□ 0.25
SSR4P1-202ENST00000429427 IQCGQ9H095 443 aaKnown RBP16.64■□□□□ 0.25
SSR4P1-202ENST00000429427 IL1RL2Q9HB29 575 aa16.64■□□□□ 0.25
SSR4P1-202ENST00000429427 MYNNQ9NPC7 610 aa16.64■□□□□ 0.25
SSR4P1-202ENST00000429427 SLC35C2Q9NQQ7 365 aa16.64■□□□□ 0.25
SSR4P1-202ENST00000429427 PSME2Q9UL46 239 aa16.64■□□□□ 0.25
SSR4P1-202ENST00000429427 FIS1Q9Y3D6 152 aa16.64■□□□□ 0.25
SSR4P1-202ENST00000429427 ZNF780BQ9Y6R6 833 aa16.64■□□□□ 0.25
SSR4P1-202ENST00000429427 NCOA6Q14686 2063 aaPredicted RBP16.64■□□□□ 0.25
SSR4P1-202ENST00000429427 CRCPO75575 148 aa16.63■□□□□ 0.25
SSR4P1-202ENST00000429427 ABOP16442 354 aa16.63■□□□□ 0.25
SSR4P1-202ENST00000429427 PLGLB1Q02325 96 aa16.63■□□□□ 0.25
SSR4P1-202ENST00000429427 HEPACAMQ14CZ8 416 aa16.63■□□□□ 0.25
SSR4P1-202ENST00000429427 IMPG1Q17R60 797 aa16.63■□□□□ 0.25
SSR4P1-202ENST00000429427 KRT71Q3SY84 523 aa16.63■□□□□ 0.25
SSR4P1-202ENST00000429427 EMC4Q5J8M3 183 aa16.63■□□□□ 0.25
SSR4P1-202ENST00000429427 SLC22A10Q63ZE4 541 aa16.63■□□□□ 0.25
SSR4P1-202ENST00000429427 ZNF787Q6DD87 383 aa16.63■□□□□ 0.25
SSR4P1-202ENST00000429427 RNF165Q6ZSG1 346 aa16.63■□□□□ 0.25
SSR4P1-202ENST00000429427 CDC26Q8NHZ8 85 aa16.63■□□□□ 0.25
SSR4P1-202ENST00000429427 FCRL1Q96LA6 429 aa16.63■□□□□ 0.25
SSR4P1-202ENST00000429427 SMC6Q96SB8 1091 aa16.63■□□□□ 0.25
SSR4P1-202ENST00000429427 EHD3Q9NZN3 535 aa16.63■□□□□ 0.25
SSR4P1-202ENST00000429427 MEMO1Q9Y316 297 aa16.63■□□□□ 0.25
SSR4P1-202ENST00000429427 NPFFR2Q9Y5X5 522 aa16.63■□□□□ 0.25
SSR4P1-202ENST00000429427 EXPH5Q8NEV8 1989 aa16.63■□□□□ 0.25
SSR4P1-202ENST00000429427 NCKAP5O14513 1909 aa16.62■□□□□ 0.25
SSR4P1-202ENST00000429427 MYO1GB0I1T2 1018 aa16.62■□□□□ 0.25
SSR4P1-202ENST00000429427 NPHS1O60500 1241 aa16.62■□□□□ 0.25
SSR4P1-202ENST00000429427 IGHG3P01860 377 aa16.62■□□□□ 0.25
SSR4P1-202ENST00000429427 LINC00032P0C843 101 aa16.62■□□□□ 0.25
SSR4P1-202ENST00000429427 ABCD3P28288 659 aa16.62■□□□□ 0.25
SSR4P1-202ENST00000429427 C2orf80Q0P641 193 aa16.62■□□□□ 0.25
SSR4P1-202ENST00000429427 RPS6KA2Q15349 733 aa16.62■□□□□ 0.25
SSR4P1-202ENST00000429427 TNFAIP8L3Q5GJ75 292 aa16.62■□□□□ 0.25
SSR4P1-202ENST00000429427 FNDC7Q5VTL7 733 aa16.62■□□□□ 0.25
SSR4P1-202ENST00000429427 CD163Q86VB7 1156 aa16.62■□□□□ 0.25
SSR4P1-202ENST00000429427 TICAM1Q8IUC6 712 aa16.62■□□□□ 0.25
SSR4P1-202ENST00000429427 DND1Q8IYX4 353 aaKnown RBP16.62■□□□□ 0.25
SSR4P1-202ENST00000429427 TAGAPQ8N103 731 aa16.62■□□□□ 0.25
SSR4P1-202ENST00000429427 MARVELD2Q8N4S9 558 aa16.62■□□□□ 0.25
SSR4P1-202ENST00000429427 OR7G2Q8NG99 324 aa16.62■□□□□ 0.25
SSR4P1-202ENST00000429427 FAM76AQ8TAV0 307 aa16.62■□□□□ 0.25
SSR4P1-202ENST00000429427 FAM57AQ8TBR7 257 aa16.62■□□□□ 0.25
SSR4P1-202ENST00000429427 DMRTA2Q96SC8 542 aa16.62■□□□□ 0.25
SSR4P1-202ENST00000429427 ZNF703Q9H7S9 590 aaPredicted RBP16.62■□□□□ 0.25
SSR4P1-202ENST00000429427 RRAGDQ9NQL2 400 aaPredicted RBP16.62■□□□□ 0.25
SSR4P1-202ENST00000429427 BCAP29Q9UHQ4 241 aa16.62■□□□□ 0.25
SSR4P1-202ENST00000429427 SEC23IPQ9Y6Y8 1000 aaKnown RBP16.62■□□□□ 0.25
SSR4P1-202ENST00000429427 ADGRG4Q8IZF6 3080 aa16.62■□□□□ 0.25
SSR4P1-202ENST00000429427 DNAJC13O75165 2243 aa16.62■□□□□ 0.25
SSR4P1-202ENST00000429427 LSM1O15116 133 aaKnown RBP16.61■□□□□ 0.25
SSR4P1-202ENST00000429427 TRIM3O75382 744 aaPredicted RBP16.61■□□□□ 0.25
SSR4P1-202ENST00000429427 BPGMP07738 259 aa16.61■□□□□ 0.25
SSR4P1-202ENST00000429427 FGF4P08620 206 aa16.61■□□□□ 0.25
SSR4P1-202ENST00000429427 ENDOUP21128 410 aaKnown RBP16.61■□□□□ 0.25
SSR4P1-202ENST00000429427 PTGS2P35354 604 aa16.61■□□□□ 0.25
SSR4P1-202ENST00000429427 DCTP40126 519 aa16.61■□□□□ 0.25
SSR4P1-202ENST00000429427 GSTM5P46439 218 aa16.61■□□□□ 0.25
SSR4P1-202ENST00000429427 MPP2Q14168 576 aa16.61■□□□□ 0.25
SSR4P1-202ENST00000429427 RFTN2Q52LD8 501 aaPredicted RBP16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms