RNA–Protein interactions for RNA: ENST00000428842.1

HMGCLL1-206, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 1 (best) BASIC

Gene HMGCLL1, Length 2,437 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-206ENST00000428842 ZAR1Q86SH2 424 aa8.89□□□□□ -0.99
HMGCLL1-206ENST00000428842 LRRC25Q8N386 305 aaPredicted RBP8.89□□□□□ -0.99
HMGCLL1-206ENST00000428842 GLB1L3Q8NCI6 653 aaPredicted RBP8.89□□□□□ -0.99
HMGCLL1-206ENST00000428842 ICA1LQ8NDH6 482 aa8.89□□□□□ -0.99
HMGCLL1-206ENST00000428842 ZFP90Q8TF47 636 aa8.89□□□□□ -0.99
HMGCLL1-206ENST00000428842 PTPMT1Q8WUK0 201 aaPredicted RBP8.89□□□□□ -0.99
HMGCLL1-206ENST00000428842 FIG4Q92562 907 aa8.89□□□□□ -0.99
HMGCLL1-206ENST00000428842 ELP4Q96EB1 424 aa8.89□□□□□ -0.99
HMGCLL1-206ENST00000428842 CCDC115Q96NT0 180 aa8.89□□□□□ -0.99
HMGCLL1-206ENST00000428842 PRPF18Q99633 342 aaKnown RBP8.89□□□□□ -0.99
HMGCLL1-206ENST00000428842 SH3GL3Q99963 347 aa8.89□□□□□ -0.99
HMGCLL1-206ENST00000428842 WFDC6Q9BQY6 131 aa8.89□□□□□ -0.99
HMGCLL1-206ENST00000428842 CPPED1Q9BRF8 314 aaPredicted RBP8.89□□□□□ -0.99
HMGCLL1-206ENST00000428842 BHLHE41Q9C0J9 482 aaPredicted RBP8.89□□□□□ -0.99
HMGCLL1-206ENST00000428842 ALG2Q9H553 416 aa8.89□□□□□ -0.99
HMGCLL1-206ENST00000428842 SPAG4Q9NPE6 437 aa8.89□□□□□ -0.99
HMGCLL1-206ENST00000428842 TMEM181Q9P2C4 612 aa8.89□□□□□ -0.99
HMGCLL1-206ENST00000428842 ZNF282Q9UDV7 671 aaPredicted RBP8.89□□□□□ -0.99
HMGCLL1-206ENST00000428842 ENTPD4Q9Y227 616 aa8.89□□□□□ -0.99
HMGCLL1-206ENST00000428842 SPTA1P02549 2419 aa8.88□□□□□ -0.99
HMGCLL1-206ENST00000428842 PKD1L2Q7Z442 2459 aa8.88□□□□□ -0.99
HMGCLL1-206ENST00000428842 LOC101059948A0A1B0GTJ6 334 aa8.88□□□□□ -0.99
HMGCLL1-206ENST00000428842 MYO1GB0I1T2 1018 aa8.88□□□□□ -0.99
HMGCLL1-206ENST00000428842 C17orf105B2RV13 164 aa8.88□□□□□ -0.99
HMGCLL1-206ENST00000428842 RNASET2O00584 256 aaKnown RBP8.88□□□□□ -0.99
HMGCLL1-206ENST00000428842 ACOT8O14734 319 aa8.88□□□□□ -0.99
HMGCLL1-206ENST00000428842 GMFGO60234 142 aa8.88□□□□□ -0.99
HMGCLL1-206ENST00000428842 MAN1A2O60476 641 aa8.88□□□□□ -0.99
HMGCLL1-206ENST00000428842 FCMRO60667 390 aa8.88□□□□□ -0.99
HMGCLL1-206ENST00000428842 ZNF354AO60765 605 aaPredicted RBP8.88□□□□□ -0.99
HMGCLL1-206ENST00000428842 CPNE3O75131 537 aaKnown RBP8.88□□□□□ -0.99
HMGCLL1-206ENST00000428842 BCAS2O75934 225 aaPredicted RBP8.88□□□□□ -0.99
HMGCLL1-206ENST00000428842 FKBP9O95302 570 aa8.88□□□□□ -0.99
HMGCLL1-206ENST00000428842 UMODP07911 640 aa8.88□□□□□ -0.99
HMGCLL1-206ENST00000428842 PABPC4LP0CB38 370 aaKnown RBP8.88□□□□□ -0.99
HMGCLL1-206ENST00000428842 OR12D1P0DN82 309 aa8.88□□□□□ -0.99
HMGCLL1-206ENST00000428842 PORP16435 677 aaPredicted RBP8.88□□□□□ -0.99
HMGCLL1-206ENST00000428842 TNNI3P19429 210 aa8.88□□□□□ -0.99
HMGCLL1-206ENST00000428842 WT1P19544 449 aaPredicted RBP8.88□□□□□ -0.99
HMGCLL1-206ENST00000428842 CSNK2A2P19784 350 aaPredicted RBP8.88□□□□□ -0.99
HMGCLL1-206ENST00000428842 PTNP21246 168 aa8.88□□□□□ -0.99
HMGCLL1-206ENST00000428842 TLX1P31314 330 aaPredicted RBP8.88□□□□□ -0.99
HMGCLL1-206ENST00000428842 CHN2P52757 468 aa8.88□□□□□ -0.99
HMGCLL1-206ENST00000428842 CRYBA2P53672 197 aa8.88□□□□□ -0.99
HMGCLL1-206ENST00000428842 MGAT2Q10469 447 aa8.88□□□□□ -0.99
HMGCLL1-206ENST00000428842 FLOT2Q14254 428 aa8.88□□□□□ -0.99
HMGCLL1-206ENST00000428842 PRICKLE4Q2TBC4 344 aa8.88□□□□□ -0.99
HMGCLL1-206ENST00000428842 CNPY1Q3B7I2 92 aa8.88□□□□□ -0.99
HMGCLL1-206ENST00000428842 GRAMD1BQ3KR37 738 aa8.88□□□□□ -0.99
HMGCLL1-206ENST00000428842 FAM198BQ6UWH4 519 aa8.88□□□□□ -0.99
HMGCLL1-206ENST00000428842 PCYOX1LQ8NBM8 494 aa8.88□□□□□ -0.99
HMGCLL1-206ENST00000428842 CATSPER1Q8NEC5 780 aa8.88□□□□□ -0.99
HMGCLL1-206ENST00000428842 XAGE5Q8WWM1 108 aa8.88□□□□□ -0.99
HMGCLL1-206ENST00000428842 KAT8Q9H7Z6 458 aaKnown RBP8.88□□□□□ -0.99
HMGCLL1-206ENST00000428842 LYRM4Q9HD34 91 aa8.88□□□□□ -0.99
HMGCLL1-206ENST00000428842 MRGBPQ9NV56 204 aa8.88□□□□□ -0.99
HMGCLL1-206ENST00000428842 LYARQ9NX58 379 aaKnown RBP8.88□□□□□ -0.99
HMGCLL1-206ENST00000428842 MAT2BQ9NZL9 334 aa8.88□□□□□ -0.99
HMGCLL1-206ENST00000428842 C3orf18Q9UK00 162 aa8.88□□□□□ -0.99
HMGCLL1-206ENST00000428842 RAB26Q9ULW5 256 aa8.88□□□□□ -0.99
HMGCLL1-206ENST00000428842 PTRH2Q9Y3E5 179 aaKnown RBP8.88□□□□□ -0.99
HMGCLL1-206ENST00000428842 A0A096LPI6 279 aa8.88□□□□□ -0.99
HMGCLL1-206ENST00000428842 TPST1O60507 370 aa8.88□□□□□ -0.99
HMGCLL1-206ENST00000428842 DRD2P14416 443 aa8.88□□□□□ -0.99
HMGCLL1-206ENST00000428842 GSTM2P28161 218 aa8.88□□□□□ -0.99
HMGCLL1-206ENST00000428842 NTSP30990 170 aa8.88□□□□□ -0.99
HMGCLL1-206ENST00000428842 CHAF1BQ13112 559 aa8.88□□□□□ -0.99
HMGCLL1-206ENST00000428842 MAPRE2Q15555 327 aa8.88□□□□□ -0.99
HMGCLL1-206ENST00000428842 MANEAQ5SRI9 462 aa8.88□□□□□ -0.99
HMGCLL1-206ENST00000428842 IKBIPQ70UQ0 350 aa8.88□□□□□ -0.99
HMGCLL1-206ENST00000428842 PTOV1Q86YD1 416 aa8.88□□□□□ -0.99
HMGCLL1-206ENST00000428842 DPP10Q8N608 796 aa8.88□□□□□ -0.99
HMGCLL1-206ENST00000428842 SMYD1Q8NB12 490 aa8.88□□□□□ -0.99
HMGCLL1-206ENST00000428842 OR52R1Q8NGF1 315 aa8.88□□□□□ -0.99
HMGCLL1-206ENST00000428842 CT55Q8WUE5 264 aa8.88□□□□□ -0.99
HMGCLL1-206ENST00000428842 SLC39A7Q92504 469 aa8.88□□□□□ -0.99
HMGCLL1-206ENST00000428842 RIT1Q92963 219 aa8.88□□□□□ -0.99
HMGCLL1-206ENST00000428842 RBM18Q96H35 190 aaKnown RBP8.88□□□□□ -0.99
HMGCLL1-206ENST00000428842 FBXO8Q9NRD0 319 aa8.88□□□□□ -0.99
HMGCLL1-206ENST00000428842 ATAD3AQ9NVI7 634 aa8.88□□□□□ -0.99
HMGCLL1-206ENST00000428842 DDX18Q9NVP1 670 aaKnown RBP8.88□□□□□ -0.99
HMGCLL1-206ENST00000428842 FAM120CQ9NX05 1096 aaKnown RBP8.88□□□□□ -0.99
HMGCLL1-206ENST00000428842 GIN1Q9NXP7 522 aa8.88□□□□□ -0.99
HMGCLL1-206ENST00000428842 PHF11Q9UIL8 331 aa8.88□□□□□ -0.99
HMGCLL1-206ENST00000428842 PCDHGB4Q9UN71 923 aa8.88□□□□□ -0.99
HMGCLL1-206ENST00000428842 SNX13Q9Y5W8 968 aa8.88□□□□□ -0.99
HMGCLL1-206ENST00000428842 GXYLT2A0PJZ3 443 aa8.87□□□□□ -0.99
HMGCLL1-206ENST00000428842 H0YIG0 161 aa8.87□□□□□ -0.99
HMGCLL1-206ENST00000428842 GCM2O75603 506 aaPredicted RBP8.87□□□□□ -0.99
HMGCLL1-206ENST00000428842 ZIC2O95409 532 aaPredicted RBP8.87□□□□□ -0.99
HMGCLL1-206ENST00000428842 CBX7O95931 251 aa8.87□□□□□ -0.99
HMGCLL1-206ENST00000428842 SMIM18P0DKX4 95 aa8.87□□□□□ -0.99
HMGCLL1-206ENST00000428842 CEACAM1P13688 526 aa8.87□□□□□ -0.99
HMGCLL1-206ENST00000428842 S1PR1P21453 382 aa8.87□□□□□ -0.99
HMGCLL1-206ENST00000428842 ZNF10P21506 573 aaPredicted RBP8.87□□□□□ -0.99
HMGCLL1-206ENST00000428842 OTX2P32243 289 aa8.87□□□□□ -0.99
HMGCLL1-206ENST00000428842 MPIP34949 423 aa8.87□□□□□ -0.99
HMGCLL1-206ENST00000428842 MRPL19P49406 292 aaKnown RBP8.87□□□□□ -0.99
HMGCLL1-206ENST00000428842 MRPS22P82650 360 aaKnown RBP8.87□□□□□ -0.99
HMGCLL1-206ENST00000428842 FUT5Q11128 374 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms