RNA–Protein interactions for RNA: ENST00000428014.1

SMC1A-203, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-203ENST00000428014 SLC34A3Q8N130 599 aa8.44□□□□□ -1.06
SMC1A-203ENST00000428014 C16orf78Q8WTQ4 265 aa8.44□□□□□ -1.06
SMC1A-203ENST00000428014 RNF138Q8WVD3 245 aa8.44□□□□□ -1.06
SMC1A-203ENST00000428014 APIPQ96GX9 242 aa8.44□□□□□ -1.06
SMC1A-203ENST00000428014 FAM111AQ96PZ2 611 aa8.44□□□□□ -1.06
SMC1A-203ENST00000428014 BTBD9Q96Q07 612 aa8.44□□□□□ -1.06
SMC1A-203ENST00000428014 IL1RL2Q9HB29 575 aa8.44□□□□□ -1.06
SMC1A-203ENST00000428014 ACKR4Q9NPB9 350 aa8.44□□□□□ -1.06
SMC1A-203ENST00000428014 SEC14L3Q9UDX4 400 aa8.44□□□□□ -1.06
SMC1A-203ENST00000428014 UTS2RQ9UKP6 389 aa8.44□□□□□ -1.06
SMC1A-203ENST00000428014 ERVK-11Q9UQG0 969 aa8.44□□□□□ -1.06
SMC1A-203ENST00000428014 ERVK-19Q9WJR5 959 aa8.44□□□□□ -1.06
SMC1A-203ENST00000428014 ENTPD4Q9Y227 616 aa8.44□□□□□ -1.06
SMC1A-203ENST00000428014 TRAF6Q9Y4K3 522 aa8.44□□□□□ -1.06
SMC1A-203ENST00000428014 KLF2Q9Y5W3 355 aaPredicted RBP8.44□□□□□ -1.06
SMC1A-203ENST00000428014 SETXQ7Z333 2677 aaKnown RBP8.44□□□□□ -1.06
SMC1A-203ENST00000428014 CROCCQ5TZA2 2017 aa8.43□□□□□ -1.06
SMC1A-203ENST00000428014 FRG2CA6NGY1 282 aa8.43□□□□□ -1.06
SMC1A-203ENST00000428014 OR6C70A6NIJ9 312 aa8.43□□□□□ -1.06
SMC1A-203ENST00000428014 A8MUA0 341 aa8.43□□□□□ -1.06
SMC1A-203ENST00000428014 E9PLN8 166 aa8.43□□□□□ -1.06
SMC1A-203ENST00000428014 LSM1O15116 133 aaKnown RBP8.43□□□□□ -1.06
SMC1A-203ENST00000428014 PEX1O43933 1283 aa8.43□□□□□ -1.06
SMC1A-203ENST00000428014 PRKNO60260 465 aaPredicted RBP8.43□□□□□ -1.06
SMC1A-203ENST00000428014 MAN1A2O60476 641 aa8.43□□□□□ -1.06
SMC1A-203ENST00000428014 COQ9O75208 318 aa8.43□□□□□ -1.06
SMC1A-203ENST00000428014 AGFG2O95081 481 aa8.43□□□□□ -1.06
SMC1A-203ENST00000428014 HSPA4LO95757 839 aa8.43□□□□□ -1.06
SMC1A-203ENST00000428014 P04436 131 aa8.43□□□□□ -1.06
SMC1A-203ENST00000428014 SERPINE1P05121 402 aa8.43□□□□□ -1.06
SMC1A-203ENST00000428014 PRPS2P11908 318 aa8.43□□□□□ -1.06
SMC1A-203ENST00000428014 GP1BBP13224 206 aa8.43□□□□□ -1.06
SMC1A-203ENST00000428014 GPX3P22352 226 aa8.43□□□□□ -1.06
SMC1A-203ENST00000428014 PTGER4P35408 488 aa8.43□□□□□ -1.06
SMC1A-203ENST00000428014 SOX3P41225 446 aa8.43□□□□□ -1.06
SMC1A-203ENST00000428014 UQCRFS1P47985 274 aa8.43□□□□□ -1.06
SMC1A-203ENST00000428014 SERPINB4P48594 390 aa8.43□□□□□ -1.06
SMC1A-203ENST00000428014 HTR6P50406 440 aa8.43□□□□□ -1.06
SMC1A-203ENST00000428014 FOXA1P55317 472 aa8.43□□□□□ -1.06
SMC1A-203ENST00000428014 FOXO1Q12778 655 aa8.43□□□□□ -1.06
SMC1A-203ENST00000428014 MAPKAPK3Q16644 382 aa8.43□□□□□ -1.06
SMC1A-203ENST00000428014 C4orf48Q5BLP8 95 aa8.43□□□□□ -1.06
SMC1A-203ENST00000428014 ARL13AQ5H913 290 aaPredicted RBP8.43□□□□□ -1.06
SMC1A-203ENST00000428014 BEND6Q5SZJ8 279 aaPredicted RBP8.43□□□□□ -1.06
SMC1A-203ENST00000428014 HLA-DQA1Q5Y7H0 255 aa8.43□□□□□ -1.06
SMC1A-203ENST00000428014 FCRLBQ6BAA4 426 aa8.43□□□□□ -1.06
SMC1A-203ENST00000428014 RPS27LQ71UM5 84 aaKnown RBP8.43□□□□□ -1.06
SMC1A-203ENST00000428014 NUP54Q7Z3B4 507 aa8.43□□□□□ -1.06
SMC1A-203ENST00000428014 CAMKMTQ7Z624 323 aa8.43□□□□□ -1.06
SMC1A-203ENST00000428014 EXOC3L1Q86VI1 746 aa8.43□□□□□ -1.06
SMC1A-203ENST00000428014 SPPL2CQ8IUH8 684 aa8.43□□□□□ -1.06
SMC1A-203ENST00000428014 SULF2Q8IWU5 870 aa8.43□□□□□ -1.06
SMC1A-203ENST00000428014 OR4N5Q8IXE1 308 aa8.43□□□□□ -1.06
SMC1A-203ENST00000428014 OR2L13Q8N349 312 aa8.43□□□□□ -1.06
SMC1A-203ENST00000428014 FAM109AQ8N4B1 249 aa8.43□□□□□ -1.06
SMC1A-203ENST00000428014 OR2W6PQ8NHA6 318 aa8.43□□□□□ -1.06
SMC1A-203ENST00000428014 PSMA8Q8TAA3 256 aa8.43□□□□□ -1.06
SMC1A-203ENST00000428014 KLHL29Q96CT2 875 aa8.43□□□□□ -1.06
SMC1A-203ENST00000428014 MTFMTQ96DP5 389 aaKnown RBP8.43□□□□□ -1.06
SMC1A-203ENST00000428014 SLC35A4Q96G79 324 aa8.43□□□□□ -1.06
SMC1A-203ENST00000428014 LCORQ96JN0 433 aaPredicted RBP8.43□□□□□ -1.06
SMC1A-203ENST00000428014 VKORC1Q9BQB6 163 aa8.43□□□□□ -1.06
SMC1A-203ENST00000428014 OCSTAMPQ9BR26 566 aa8.43□□□□□ -1.06
SMC1A-203ENST00000428014 CNPPD1Q9BV87 410 aa8.43□□□□□ -1.06
SMC1A-203ENST00000428014 LRTM1Q9HBL6 345 aa8.43□□□□□ -1.06
SMC1A-203ENST00000428014 GIN1Q9NXP7 522 aa8.43□□□□□ -1.06
SMC1A-203ENST00000428014 TAS2R9Q9NYW1 312 aa8.43□□□□□ -1.06
SMC1A-203ENST00000428014 BOKQ9UMX3 212 aaPredicted RBP8.43□□□□□ -1.06
SMC1A-203ENST00000428014 C19orf53Q9UNZ5 99 aaPredicted RBP8.43□□□□□ -1.06
SMC1A-203ENST00000428014 GPR55Q9Y2T6 319 aaPredicted RBP8.43□□□□□ -1.06
SMC1A-203ENST00000428014 MRPS18CQ9Y3D5 142 aaKnown RBP8.43□□□□□ -1.06
SMC1A-203ENST00000428014 TIMM22Q9Y584 194 aa8.43□□□□□ -1.06
SMC1A-203ENST00000428014 NPFFR2Q9Y5X5 522 aa8.43□□□□□ -1.06
SMC1A-203ENST00000428014 CHCHD2Q9Y6H1 151 aaPredicted RBP8.43□□□□□ -1.06
SMC1A-203ENST00000428014 UNC79Q9P2D8 2635 aa8.43□□□□□ -1.06
SMC1A-203ENST00000428014 NCOA6Q14686 2063 aaPredicted RBP8.42□□□□□ -1.06
SMC1A-203ENST00000428014 SMIM23A6NLE4 172 aa8.42□□□□□ -1.06
SMC1A-203ENST00000428014 FAM47E-STBD1D6RA91 191 aa8.42□□□□□ -1.06
SMC1A-203ENST00000428014 WWP2O00308 870 aa8.42□□□□□ -1.06
SMC1A-203ENST00000428014 BCKDKO14874 412 aa8.42□□□□□ -1.06
SMC1A-203ENST00000428014 KLF11O14901 512 aa8.42□□□□□ -1.06
SMC1A-203ENST00000428014 SLC19A2O60779 497 aa8.42□□□□□ -1.06
SMC1A-203ENST00000428014 SH3BGRLO75368 114 aa8.42□□□□□ -1.06
SMC1A-203ENST00000428014 OR6B1O95007 311 aa8.42□□□□□ -1.06
SMC1A-203ENST00000428014 CBX7O95931 251 aa8.42□□□□□ -1.06
SMC1A-203ENST00000428014 GBAP04062 536 aa8.42□□□□□ -1.06
SMC1A-203ENST00000428014 IL3P08700 152 aa8.42□□□□□ -1.06
SMC1A-203ENST00000428014 TSPAN8P19075 237 aa8.42□□□□□ -1.06
SMC1A-203ENST00000428014 MST1P26927 711 aa8.42□□□□□ -1.06
SMC1A-203ENST00000428014 SOX18P35713 384 aa8.42□□□□□ -1.06
SMC1A-203ENST00000428014 MEOX1P50221 254 aa8.42□□□□□ -1.06
SMC1A-203ENST00000428014 EMDP50402 254 aa8.42□□□□□ -1.06
SMC1A-203ENST00000428014 PNLIPRP2P54317 469 aa8.42□□□□□ -1.06
SMC1A-203ENST00000428014 HMGCS1Q01581 520 aa8.42□□□□□ -1.06
SMC1A-203ENST00000428014 MRPL49Q13405 166 aaKnown RBP8.42□□□□□ -1.06
SMC1A-203ENST00000428014 ART3Q13508 389 aa8.42□□□□□ -1.06
SMC1A-203ENST00000428014 SF3B4Q15427 424 aaKnown RBP eCLIP8.42□□□□□ -1.06
SMC1A-203ENST00000428014 CYP27C1Q4G0S4 372 aa8.42□□□□□ -1.06
SMC1A-203ENST00000428014 SGO1Q5FBB7 561 aa8.42□□□□□ -1.06
SMC1A-203ENST00000428014 TCHHL1Q5QJ38 904 aaPredicted RBP8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms