RNA–Protein interactions for RNA: ENST00000424937.1

PTCHD3P2-201, Transcript of patched domain containing 3 pseudogene 2, humanhuman

BASIC

Gene PTCHD3P2, Length 1,205 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3P2-201ENST00000424937 TMED5Q9Y3A6 229 aa20.61■□□□□ 0.89
PTCHD3P2-201ENST00000424937 TMEM120BA0PK00 339 aa20.6■□□□□ 0.89
PTCHD3P2-201ENST00000424937 TFECO14948 347 aaPredicted RBP20.6■□□□□ 0.89
PTCHD3P2-201ENST00000424937 WISP2O76076 250 aa20.6■□□□□ 0.89
PTCHD3P2-201ENST00000424937 CCL3P10147 92 aa20.6■□□□□ 0.89
PTCHD3P2-201ENST00000424937 NTSP30990 170 aa20.6■□□□□ 0.89
PTCHD3P2-201ENST00000424937 ABCE1P61221 599 aaKnown RBP20.6■□□□□ 0.89
PTCHD3P2-201ENST00000424937 MAGOHP61326 146 aaKnown RBP20.6■□□□□ 0.89
PTCHD3P2-201ENST00000424937 CEBPEQ15744 281 aa20.6■□□□□ 0.89
PTCHD3P2-201ENST00000424937 PRSS53Q2L4Q9 553 aa20.6■□□□□ 0.89
PTCHD3P2-201ENST00000424937 SIAH3Q8IW03 269 aa20.6■□□□□ 0.89
PTCHD3P2-201ENST00000424937 FAM13CQ8NE31 585 aa20.6■□□□□ 0.89
PTCHD3P2-201ENST00000424937 OR2M7Q8NG81 312 aa20.6■□□□□ 0.89
PTCHD3P2-201ENST00000424937 CLHC1Q8NHS4 586 aa20.6■□□□□ 0.89
PTCHD3P2-201ENST00000424937 GFM2Q969S9 779 aaKnown RBP20.6■□□□□ 0.89
PTCHD3P2-201ENST00000424937 ADIPOR1Q96A54 375 aa20.6■□□□□ 0.89
PTCHD3P2-201ENST00000424937 TP53INP1Q96A56 240 aa20.6■□□□□ 0.89
PTCHD3P2-201ENST00000424937 PPP3R2Q96LZ3 170 aa20.6■□□□□ 0.89
PTCHD3P2-201ENST00000424937 GPR137Q96N19 417 aa20.6■□□□□ 0.89
PTCHD3P2-201ENST00000424937 TSSK3Q96PN8 268 aa20.6■□□□□ 0.89
PTCHD3P2-201ENST00000424937 ITPAQ9BY32 194 aa20.6■□□□□ 0.89
PTCHD3P2-201ENST00000424937 ZNF395Q9H8N7 513 aaPredicted RBP20.6■□□□□ 0.89
PTCHD3P2-201ENST00000424937 TMBIM4Q9HC24 238 aa20.6■□□□□ 0.89
PTCHD3P2-201ENST00000424937 SACM1LQ9NTJ5 587 aa20.6■□□□□ 0.89
PTCHD3P2-201ENST00000424937 EXO1Q9UQ84 846 aaKnown RBP20.6■□□□□ 0.89
PTCHD3P2-201ENST00000424937 NCKAP5O14513 1909 aa20.59■□□□□ 0.89
PTCHD3P2-201ENST00000424937 PTPN13Q12923 2485 aa20.59■□□□□ 0.89
PTCHD3P2-201ENST00000424937 ATP6AP2A0A1C7CYW4 349 aa20.59■□□□□ 0.89
PTCHD3P2-201ENST00000424937 PINLYPA6NC86 204 aa20.59■□□□□ 0.89
PTCHD3P2-201ENST00000424937 ATP6AP2O75787 350 aa20.59■□□□□ 0.89
PTCHD3P2-201ENST00000424937 P04436 131 aa20.59■□□□□ 0.89
PTCHD3P2-201ENST00000424937 JUNP05412 331 aaKnown RBP20.59■□□□□ 0.89
PTCHD3P2-201ENST00000424937 FBXO45P0C2W1 286 aa20.59■□□□□ 0.89
PTCHD3P2-201ENST00000424937 MPIP34949 423 aa20.59■□□□□ 0.89
PTCHD3P2-201ENST00000424937 NCBP2P52298 156 aaKnown RBP eCLIP20.59■□□□□ 0.89
PTCHD3P2-201ENST00000424937 NRG3P56975 720 aa20.59■□□□□ 0.89
PTCHD3P2-201ENST00000424937 TMEM64Q6YI46 380 aa20.59■□□□□ 0.89
PTCHD3P2-201ENST00000424937 FAM47EQ6ZV65 393 aa20.59■□□□□ 0.89
PTCHD3P2-201ENST00000424937 DND1Q8IYX4 353 aaKnown RBP20.59■□□□□ 0.89
PTCHD3P2-201ENST00000424937 ZNF781Q8N8C0 355 aa20.59■□□□□ 0.89
PTCHD3P2-201ENST00000424937 ZFP62Q8NB50 900 aaPredicted RBP20.59■□□□□ 0.89
PTCHD3P2-201ENST00000424937 OR5M3Q8NGP4 307 aa20.59■□□□□ 0.89
PTCHD3P2-201ENST00000424937 MGARPQ8TDB4 240 aa20.59■□□□□ 0.89
PTCHD3P2-201ENST00000424937 C3orf30Q96M34 536 aa20.59■□□□□ 0.89
PTCHD3P2-201ENST00000424937 ANKRA2Q9H9E1 313 aa20.59■□□□□ 0.89
PTCHD3P2-201ENST00000424937 MYO1GB0I1T2 1018 aa20.58■□□□□ 0.89
PTCHD3P2-201ENST00000424937 AKAP10O43572 662 aa20.58■□□□□ 0.89
PTCHD3P2-201ENST00000424937 PEX11AO75192 247 aa20.58■□□□□ 0.89
PTCHD3P2-201ENST00000424937 LRATO95237 230 aa20.58■□□□□ 0.89
PTCHD3P2-201ENST00000424937 GRK2P25098 689 aa20.58■□□□□ 0.89
PTCHD3P2-201ENST00000424937 SLC1A6P48664 564 aa20.58■□□□□ 0.89
PTCHD3P2-201ENST00000424937 PLGLB1Q02325 96 aa20.58■□□□□ 0.89
PTCHD3P2-201ENST00000424937 PDCD2Q16342 344 aaPredicted RBP20.58■□□□□ 0.89
PTCHD3P2-201ENST00000424937 ATP6AP1LQ52LC2 224 aa20.58■□□□□ 0.89
PTCHD3P2-201ENST00000424937 ANKRD26P1Q6NSI1 321 aa20.58■□□□□ 0.89
PTCHD3P2-201ENST00000424937 GK5Q6ZS86 529 aa20.58■□□□□ 0.89
PTCHD3P2-201ENST00000424937 PRR22Q8IZ63 422 aa20.58■□□□□ 0.89
PTCHD3P2-201ENST00000424937 C17orf47Q8NEP4 570 aa20.58■□□□□ 0.89
PTCHD3P2-201ENST00000424937 OR10G3Q8NGC4 313 aa20.58■□□□□ 0.89
PTCHD3P2-201ENST00000424937 TLCD1Q96CP7 247 aa20.58■□□□□ 0.89
PTCHD3P2-201ENST00000424937 FAM173AQ9BQD7 235 aa20.58■□□□□ 0.89
PTCHD3P2-201ENST00000424937 NXF5Q9H1B4 397 aaKnown RBP20.58■□□□□ 0.89
PTCHD3P2-201ENST00000424937 PRODH2Q9UF12 536 aa20.58■□□□□ 0.89
PTCHD3P2-201ENST00000424937 BAIAP2L1Q9UHR4 511 aa20.58■□□□□ 0.89
PTCHD3P2-201ENST00000424937 ERRFI1Q9UJM3 462 aaPredicted RBP20.58■□□□□ 0.89
PTCHD3P2-201ENST00000424937 SLC5A6Q9Y289 635 aa20.58■□□□□ 0.89
PTCHD3P2-201ENST00000424937 ZNF407Q9C0G0 2248 aa20.58■□□□□ 0.88
PTCHD3P2-201ENST00000424937 DNAJC13O75165 2243 aa20.57■□□□□ 0.88
PTCHD3P2-201ENST00000424937 HS6ST1O60243 411 aa20.57■□□□□ 0.88
PTCHD3P2-201ENST00000424937 BCKDHAP12694 445 aa20.57■□□□□ 0.88
PTCHD3P2-201ENST00000424937 CNR1P21554 472 aa20.57■□□□□ 0.88
PTCHD3P2-201ENST00000424937 MAPK1P28482 360 aa20.57■□□□□ 0.88
PTCHD3P2-201ENST00000424937 DNASE1L1P49184 302 aa20.57■□□□□ 0.88
PTCHD3P2-201ENST00000424937 TMED10P49755 219 aaKnown RBP20.57■□□□□ 0.88
PTCHD3P2-201ENST00000424937 RBPJQ06330 500 aa20.57■□□□□ 0.88
PTCHD3P2-201ENST00000424937 NTRK2Q16620 822 aa20.57■□□□□ 0.88
PTCHD3P2-201ENST00000424937 KRTCAP3Q53RY4 240 aa20.57■□□□□ 0.88
PTCHD3P2-201ENST00000424937 PRAMEF20Q5VT98 475 aa20.57■□□□□ 0.88
PTCHD3P2-201ENST00000424937 SLC22A10Q63ZE4 541 aa20.57■□□□□ 0.88
PTCHD3P2-201ENST00000424937 PAQR8Q8TEZ7 354 aa20.57■□□□□ 0.88
PTCHD3P2-201ENST00000424937 TUBGCP3Q96CW5 907 aa20.57■□□□□ 0.88
PTCHD3P2-201ENST00000424937 ERP27Q96DN0 273 aa20.57■□□□□ 0.88
PTCHD3P2-201ENST00000424937 SORT1Q99523 831 aa20.57■□□□□ 0.88
PTCHD3P2-201ENST00000424937 C1orf50Q9BV19 199 aa20.57■□□□□ 0.88
PTCHD3P2-201ENST00000424937 C20orf27Q9GZN8 174 aa20.57■□□□□ 0.88
PTCHD3P2-201ENST00000424937 SH2D2AQ9NP31 389 aa20.57■□□□□ 0.88
PTCHD3P2-201ENST00000424937 RYDENQ9NUL5 291 aaKnown RBP20.57■□□□□ 0.88
PTCHD3P2-201ENST00000424937 TAS2R7Q9NYW3 318 aa20.57■□□□□ 0.88
PTCHD3P2-201ENST00000424937 RAP2CQ9Y3L5 183 aa20.57■□□□□ 0.88
PTCHD3P2-201ENST00000424937 NPFFR2Q9Y5X5 522 aa20.57■□□□□ 0.88
PTCHD3P2-201ENST00000424937 MYO7BQ6PIF6 2116 aa20.57■□□□□ 0.88
PTCHD3P2-201ENST00000424937 FAM166BA8MTA8 275 aa20.56■□□□□ 0.88
PTCHD3P2-201ENST00000424937 CAPN14A8MX76 684 aa20.56■□□□□ 0.88
PTCHD3P2-201ENST00000424937 ACOT7O00154 380 aa20.56■□□□□ 0.88
PTCHD3P2-201ENST00000424937 PDPK1O15530 556 aa20.56■□□□□ 0.88
PTCHD3P2-201ENST00000424937 ASNA1O43681 348 aa20.56■□□□□ 0.88
PTCHD3P2-201ENST00000424937 BCAS2O75934 225 aaPredicted RBP20.56■□□□□ 0.88
PTCHD3P2-201ENST00000424937 SNUPNO95149 360 aaKnown RBP20.56■□□□□ 0.88
PTCHD3P2-201ENST00000424937 PIGAP37287 484 aa20.56■□□□□ 0.88
PTCHD3P2-201ENST00000424937 ASMTP46597 345 aa20.56■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms