RNA–Protein interactions for RNA: ENST00000424674.1

SF3B1-205, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 723 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-205ENST00000424674 NARFLQ9H6Q4 476 aa3.41□□□□□ -1.86
SF3B1-205ENST00000424674 MRM3Q9HC36 420 aaKnown RBP3.41□□□□□ -1.86
SF3B1-205ENST00000424674 ZNF302Q9NR11 478 aa3.41□□□□□ -1.86
SF3B1-205ENST00000424674 DYRK4Q9NR20 520 aa3.41□□□□□ -1.86
SF3B1-205ENST00000424674 ECHDC1Q9NTX5 307 aa3.41□□□□□ -1.86
SF3B1-205ENST00000424674 LYARQ9NX58 379 aaKnown RBP3.41□□□□□ -1.86
SF3B1-205ENST00000424674 NLGN3Q9NZ94 848 aa3.41□□□□□ -1.86
SF3B1-205ENST00000424674 C1RLQ9NZP8 487 aa3.41□□□□□ -1.86
SF3B1-205ENST00000424674 IFNKQ9P0W0 207 aa3.41□□□□□ -1.86
SF3B1-205ENST00000424674 PSMC3IPQ9P2W1 217 aaPredicted RBP3.41□□□□□ -1.86
SF3B1-205ENST00000424674 RNF7Q9UBF6 113 aa3.41□□□□□ -1.86
SF3B1-205ENST00000424674 EPHA6Q9UF33 1036 aa3.41□□□□□ -1.86
SF3B1-205ENST00000424674 PITPNC1Q9UKF7 332 aa3.41□□□□□ -1.86
SF3B1-205ENST00000424674 ABCG2Q9UNQ0 655 aa3.41□□□□□ -1.86
SF3B1-205ENST00000424674 FLVCR2Q9UPI3 526 aa3.41□□□□□ -1.86
SF3B1-205ENST00000424674 EXOGQ9Y2C4 368 aaKnown RBP3.41□□□□□ -1.86
SF3B1-205ENST00000424674 RBMX2Q9Y388 322 aaKnown RBP3.41□□□□□ -1.86
SF3B1-205ENST00000424674 HEMK1Q9Y5R4 338 aaPredicted RBP3.41□□□□□ -1.86
SF3B1-205ENST00000424674 STON1Q9Y6Q2 735 aa3.41□□□□□ -1.86
SF3B1-205ENST00000424674 ZMYM6O95789 1325 aa3.41□□□□□ -1.86
SF3B1-205ENST00000424674 COL3A1P02461 1466 aaPredicted RBP3.41□□□□□ -1.86
SF3B1-205ENST00000424674 A0A1B0GVL5 298 aa3.4□□□□□ -1.87
SF3B1-205ENST00000424674 MGAT4DA6NG13 374 aa3.4□□□□□ -1.87
SF3B1-205ENST00000424674 FBLL1A6NHQ2 334 aaKnown RBP3.4□□□□□ -1.87
SF3B1-205ENST00000424674 H3BQV1 296 aa3.4□□□□□ -1.87
SF3B1-205ENST00000424674 TMEM189-UBE2V1I3L0A0 370 aa3.4□□□□□ -1.87
SF3B1-205ENST00000424674 I6L893 689 aaPredicted RBP3.4□□□□□ -1.87
SF3B1-205ENST00000424674 GOLGA8RI6L899 631 aa3.4□□□□□ -1.87
SF3B1-205ENST00000424674 BTN3A3O00478 584 aa3.4□□□□□ -1.87
SF3B1-205ENST00000424674 FPGTO14772 594 aa3.4□□□□□ -1.87
SF3B1-205ENST00000424674 SNX3O60493 162 aa3.4□□□□□ -1.87
SF3B1-205ENST00000424674 NOL4O94818 638 aa3.4□□□□□ -1.87
SF3B1-205ENST00000424674 RPP14O95059 124 aaKnown RBP3.4□□□□□ -1.87
SF3B1-205ENST00000424674 TTLL1O95922 423 aa3.4□□□□□ -1.87
SF3B1-205ENST00000424674 GOT2P00505 430 aaKnown RBP3.4□□□□□ -1.87
SF3B1-205ENST00000424674 CST1P01037 141 aa3.4□□□□□ -1.87
SF3B1-205ENST00000424674 HLA-DRAP01903 254 aa3.4□□□□□ -1.87
SF3B1-205ENST00000424674 RAF1P04049 648 aa3.4□□□□□ -1.87
SF3B1-205ENST00000424674 GSTA2P09210 222 aa3.4□□□□□ -1.87
SF3B1-205ENST00000424674 HSMCR30P0CW71 290 aa3.4□□□□□ -1.87
SF3B1-205ENST00000424674 CT45A8P0DMV1 189 aa3.4□□□□□ -1.87
SF3B1-205ENST00000424674 CT45A9P0DMV2 189 aa3.4□□□□□ -1.87
SF3B1-205ENST00000424674 IRF2P14316 349 aa3.4□□□□□ -1.87
SF3B1-205ENST00000424674 HOXB8P17481 243 aaPredicted RBP3.4□□□□□ -1.87
SF3B1-205ENST00000424674 CAPN2P17655 700 aa3.4□□□□□ -1.87
SF3B1-205ENST00000424674 MAOAP21397 527 aa3.4□□□□□ -1.87
SF3B1-205ENST00000424674 HRH2P25021 359 aa3.4□□□□□ -1.87
SF3B1-205ENST00000424674 ITPKBP27987 946 aa3.4□□□□□ -1.87
SF3B1-205ENST00000424674 LAP3P28838 519 aa3.4□□□□□ -1.87
SF3B1-205ENST00000424674 CTGFP29279 349 aa3.4□□□□□ -1.87
SF3B1-205ENST00000424674 IL12BP29460 328 aa3.4□□□□□ -1.87
SF3B1-205ENST00000424674 HMOX2P30519 316 aa3.4□□□□□ -1.87
SF3B1-205ENST00000424674 OXTRP30559 389 aa3.4□□□□□ -1.87
SF3B1-205ENST00000424674 CRYBB2P43320 205 aa3.4□□□□□ -1.87
SF3B1-205ENST00000424674 GLIPR1P48060 266 aa3.4□□□□□ -1.87
SF3B1-205ENST00000424674 PCYT1AP49585 367 aa3.4□□□□□ -1.87
SF3B1-205ENST00000424674 SLC7A2P52569 658 aa3.4□□□□□ -1.87
SF3B1-205ENST00000424674 NDST2P52849 883 aa3.4□□□□□ -1.87
SF3B1-205ENST00000424674 COPB1P53618 953 aaKnown RBP3.4□□□□□ -1.87
SF3B1-205ENST00000424674 PRPS1P60891 318 aa3.4□□□□□ -1.87
SF3B1-205ENST00000424674 PPIAP62937 165 aaKnown RBP3.4□□□□□ -1.87
SF3B1-205ENST00000424674 EEF1A1P68104 462 aaKnown RBP3.4□□□□□ -1.87
SF3B1-205ENST00000424674 PLA2G7Q13093 441 aa3.4□□□□□ -1.87
SF3B1-205ENST00000424674 UBE2V1Q13404 147 aa3.4□□□□□ -1.87
SF3B1-205ENST00000424674 NFATC2Q13469 925 aa3.4□□□□□ -1.87
SF3B1-205ENST00000424674 EXOSC2Q13868 293 aaKnown RBP3.4□□□□□ -1.87
SF3B1-205ENST00000424674 VEZF1Q14119 521 aa3.4□□□□□ -1.87
SF3B1-205ENST00000424674 NONOQ15233 471 aaKnown RBP eCLIP3.4□□□□□ -1.87
SF3B1-205ENST00000424674 ETFDHQ16134 617 aa3.4□□□□□ -1.87
SF3B1-205ENST00000424674 CAMK4Q16566 473 aa3.4□□□□□ -1.87
SF3B1-205ENST00000424674 ZSWIM7Q19AV6 140 aa3.4□□□□□ -1.87
SF3B1-205ENST00000424674 ODF4Q2M2E3 257 aa3.4□□□□□ -1.87
SF3B1-205ENST00000424674 TTMPQ5BVD1 217 aa3.4□□□□□ -1.87
SF3B1-205ENST00000424674 CT45A2Q5DJT8 189 aa3.4□□□□□ -1.87
SF3B1-205ENST00000424674 ARMCX4Q5H9R4 360 aa3.4□□□□□ -1.87
SF3B1-205ENST00000424674 TMEM31Q5JXX7 168 aa3.4□□□□□ -1.87
SF3B1-205ENST00000424674 EEF1A1P5Q5VTE0 462 aa3.4□□□□□ -1.87
SF3B1-205ENST00000424674 OR2A2Q6IF42 318 aa3.4□□□□□ -1.87
SF3B1-205ENST00000424674 CAPN13Q6MZZ7 669 aaPredicted RBP3.4□□□□□ -1.87
SF3B1-205ENST00000424674 C11orf63Q6NUN7 778 aa3.4□□□□□ -1.87
SF3B1-205ENST00000424674 FAM71F2Q6NXP2 309 aa3.4□□□□□ -1.87
SF3B1-205ENST00000424674 SCYL2Q6P3W7 929 aa3.4□□□□□ -1.87
SF3B1-205ENST00000424674 FAM171BQ6P995 826 aa3.4□□□□□ -1.87
SF3B1-205ENST00000424674 CWC27Q6UX04 472 aaKnown RBP3.4□□□□□ -1.87
SF3B1-205ENST00000424674 VSTM1Q6UX27 236 aa3.4□□□□□ -1.87
SF3B1-205ENST00000424674 TMIGD1Q6UXZ0 262 aa3.4□□□□□ -1.87
SF3B1-205ENST00000424674 H2BFWTQ7Z2G1 175 aa3.4□□□□□ -1.87
SF3B1-205ENST00000424674 TMPRSS11BQ86T26 416 aa3.4□□□□□ -1.87
SF3B1-205ENST00000424674 SERPINA11Q86U17 422 aa3.4□□□□□ -1.87
SF3B1-205ENST00000424674 SLC26A11Q86WA9 606 aa3.4□□□□□ -1.87
SF3B1-205ENST00000424674 CCDC25Q86WR0 208 aa3.4□□□□□ -1.87
SF3B1-205ENST00000424674 CHSY1Q86X52 802 aa3.4□□□□□ -1.87
SF3B1-205ENST00000424674 SFTPA2Q8IWL1 248 aa3.4□□□□□ -1.87
SF3B1-205ENST00000424674 SPATA6LQ8N4H0 392 aa3.4□□□□□ -1.87
SF3B1-205ENST00000424674 FAM86B1Q8N7N1 296 aa3.4□□□□□ -1.87
SF3B1-205ENST00000424674 SLC38A9Q8NBW4 561 aa3.4□□□□□ -1.87
SF3B1-205ENST00000424674 OR8J2Q8NGG1 315 aa3.4□□□□□ -1.87
SF3B1-205ENST00000424674 OR6M1Q8NGM8 313 aa3.4□□□□□ -1.87
SF3B1-205ENST00000424674 OR1L4Q8NGR5 311 aa3.4□□□□□ -1.87
SF3B1-205ENST00000424674 FANK1Q8TC84 345 aa3.4□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms