RNA–Protein interactions for RNA: ENST00000420138.5

GPC1-202, Transcript of glypican 1, humanhuman

TSL 5 BASIC

Gene GPC1, Length 1,835 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-202ENST00000420138 OR7D2Q96RA2 312 aa19.64■□□□□ 0.73
GPC1-202ENST00000420138 TREX2Q9BQ50 279 aaPredicted RBP19.64■□□□□ 0.73
GPC1-202ENST00000420138 RBCK1Q9BYM8 510 aa19.64■□□□□ 0.73
GPC1-202ENST00000420138 NDUFAF4Q9P032 175 aa19.64■□□□□ 0.73
GPC1-202ENST00000420138 ZNF451Q9Y4E5 1061 aa19.64■□□□□ 0.73
GPC1-202ENST00000420138 PCDHGA5Q9Y5G8 931 aa19.64■□□□□ 0.73
GPC1-202ENST00000420138 CLDN16Q9Y5I7 305 aa19.64■□□□□ 0.73
GPC1-202ENST00000420138 C5orf58C9J3I9 102 aa19.63■□□□□ 0.73
GPC1-202ENST00000420138 H3BNH8 94 aa19.63■□□□□ 0.73
GPC1-202ENST00000420138 TGFBR3LH3BV60 316 aa19.63■□□□□ 0.73
GPC1-202ENST00000420138 IFNA14P01570 189 aa19.63■□□□□ 0.73
GPC1-202ENST00000420138 ALPLP05186 524 aa19.63■□□□□ 0.73
GPC1-202ENST00000420138 NELFEP18615 380 aaKnown RBP19.63■□□□□ 0.73
GPC1-202ENST00000420138 ITGA1P56199 1179 aa19.63■□□□□ 0.73
GPC1-202ENST00000420138 PPP2R2BQ00005 443 aa19.63■□□□□ 0.73
GPC1-202ENST00000420138 GRM7Q14831 915 aa19.63■□□□□ 0.73
GPC1-202ENST00000420138 PRICKLE4Q2TBC4 344 aa19.63■□□□□ 0.73
GPC1-202ENST00000420138 CYP27C1Q4G0S4 372 aa19.63■□□□□ 0.73
GPC1-202ENST00000420138 ANKRD34AQ69YU3 496 aa19.63■□□□□ 0.73
GPC1-202ENST00000420138 MFSD12Q6NUT3 480 aa19.63■□□□□ 0.73
GPC1-202ENST00000420138 OLIG3Q7RTU3 272 aa19.63■□□□□ 0.73
GPC1-202ENST00000420138 STK32CQ86UX6 486 aa19.63■□□□□ 0.73
GPC1-202ENST00000420138 SVOPLQ8N434 492 aa19.63■□□□□ 0.73
GPC1-202ENST00000420138 DHRSXQ8N5I4 330 aa19.63■□□□□ 0.73
GPC1-202ENST00000420138 GPR32P1Q8NGA4 272 aa19.63■□□□□ 0.73
GPC1-202ENST00000420138 OR1L3Q8NH93 324 aa19.63■□□□□ 0.73
GPC1-202ENST00000420138 OR5K1Q8NHB7 308 aa19.63■□□□□ 0.73
GPC1-202ENST00000420138 PEX11GQ96HA9 241 aa19.63■□□□□ 0.73
GPC1-202ENST00000420138 TSC22D3Q99576 134 aa19.63■□□□□ 0.73
GPC1-202ENST00000420138 EQTNQ9NQ60 294 aa19.63■□□□□ 0.73
GPC1-202ENST00000420138 DDX18Q9NVP1 670 aaKnown RBP19.63■□□□□ 0.73
GPC1-202ENST00000420138 PTGFRNQ9P2B2 879 aa19.63■□□□□ 0.73
GPC1-202ENST00000420138 U3KQV3 271 aa19.63■□□□□ 0.73
GPC1-202ENST00000420138 A0A1W2PQM1 296 aa19.62■□□□□ 0.73
GPC1-202ENST00000420138 CPED1A4D0V7 1026 aa19.62■□□□□ 0.73
GPC1-202ENST00000420138 A8MU76 341 aa19.62■□□□□ 0.73
GPC1-202ENST00000420138 ASNA1O43681 348 aa19.62■□□□□ 0.73
GPC1-202ENST00000420138 SLC28A2O43868 658 aa19.62■□□□□ 0.73
GPC1-202ENST00000420138 DPM1O60762 260 aa19.62■□□□□ 0.73
GPC1-202ENST00000420138 CHRM4P08173 479 aa19.62■□□□□ 0.73
GPC1-202ENST00000420138 MSL3P1P0C860 447 aa19.62■□□□□ 0.73
GPC1-202ENST00000420138 RNH1P13489 461 aaKnown RBP19.62■□□□□ 0.73
GPC1-202ENST00000420138 OR1E2P47887 323 aa19.62■□□□□ 0.73
GPC1-202ENST00000420138 ALDH3A2P51648 485 aa19.62■□□□□ 0.73
GPC1-202ENST00000420138 DAG1Q14118 895 aa19.62■□□□□ 0.73
GPC1-202ENST00000420138 IFI44LQ53G44 452 aa19.62■□□□□ 0.73
GPC1-202ENST00000420138 DGAT2L6Q6ZPD8 337 aa19.62■□□□□ 0.73
GPC1-202ENST00000420138 SATL1Q86VE3 508 aa19.62■□□□□ 0.73
GPC1-202ENST00000420138 KMT5CQ86Y97 462 aa19.62■□□□□ 0.73
GPC1-202ENST00000420138 ARMC8Q8IUR7 673 aa19.62■□□□□ 0.73
GPC1-202ENST00000420138 METTL27Q8N6F8 245 aaPredicted RBP19.62■□□□□ 0.73
GPC1-202ENST00000420138 EID2Q8N6I1 236 aa19.62■□□□□ 0.73
GPC1-202ENST00000420138 SPPL2AQ8TCT8 520 aa19.62■□□□□ 0.73
GPC1-202ENST00000420138 DOK4Q8TEW6 326 aa19.62■□□□□ 0.73
GPC1-202ENST00000420138 CYGBQ8WWM9 190 aa19.62■□□□□ 0.73
GPC1-202ENST00000420138 RMND5BQ96G75 393 aaPredicted RBP19.62■□□□□ 0.73
GPC1-202ENST00000420138 MS4A4EQ96PG1 132 aa19.62■□□□□ 0.73
GPC1-202ENST00000420138 BARD1Q99728 777 aaKnown RBP19.62■□□□□ 0.73
GPC1-202ENST00000420138 ZNF768Q9H5H4 540 aaKnown RBP19.62■□□□□ 0.73
GPC1-202ENST00000420138 CLK4Q9HAZ1 481 aaKnown RBP19.62■□□□□ 0.73
GPC1-202ENST00000420138 BCL2L10Q9HD36 194 aa19.62■□□□□ 0.73
GPC1-202ENST00000420138 IRAK4Q9NWZ3 460 aa19.62■□□□□ 0.73
GPC1-202ENST00000420138 ATXN7L1Q9ULK2 861 aaPredicted RBP19.62■□□□□ 0.73
GPC1-202ENST00000420138 C19orf53Q9UNZ5 99 aaPredicted RBP19.62■□□□□ 0.73
GPC1-202ENST00000420138 GPC6Q9Y625 555 aaPredicted RBP19.62■□□□□ 0.73
GPC1-202ENST00000420138 FRYLO94915 3013 aa19.62■□□□□ 0.73
GPC1-202ENST00000420138 ASXL3Q9C0F0 2248 aa19.62■□□□□ 0.73
GPC1-202ENST00000420138 TMEM150CB9EJG8 249 aa19.62■□□□□ 0.73
GPC1-202ENST00000420138 H0YIG0 161 aa19.62■□□□□ 0.73
GPC1-202ENST00000420138 PCDHGA12O60330 932 aa19.62■□□□□ 0.73
GPC1-202ENST00000420138 OR2B3O76000 313 aa19.62■□□□□ 0.73
GPC1-202ENST00000420138 CT62P0C5K7 136 aa19.62■□□□□ 0.73
GPC1-202ENST00000420138 ATP6V1B1P15313 513 aa19.62■□□□□ 0.73
GPC1-202ENST00000420138 CAPGP40121 348 aa19.62■□□□□ 0.73
GPC1-202ENST00000420138 SKP1P63208 163 aa19.62■□□□□ 0.73
GPC1-202ENST00000420138 EXOSC6Q5RKV6 272 aaKnown RBP19.62■□□□□ 0.73
GPC1-202ENST00000420138 TMEM71Q6P5X7 295 aa19.62■□□□□ 0.73
GPC1-202ENST00000420138 WDR53Q7Z5U6 358 aaPredicted RBP19.62■□□□□ 0.73
GPC1-202ENST00000420138 TSPAN14Q8NG11 270 aa19.62■□□□□ 0.73
GPC1-202ENST00000420138 ZNF675Q8TD23 568 aa19.62■□□□□ 0.73
GPC1-202ENST00000420138 LZICQ8WZA0 190 aa19.62■□□□□ 0.73
GPC1-202ENST00000420138 CTHRC1Q96CG8 243 aa19.62■□□□□ 0.73
GPC1-202ENST00000420138 MMABQ96EY8 250 aaPredicted RBP19.62■□□□□ 0.73
GPC1-202ENST00000420138 OSBPL10Q9BXB5 764 aa19.62■□□□□ 0.73
GPC1-202ENST00000420138 ACTRT3Q9BYD9 372 aa19.62■□□□□ 0.73
GPC1-202ENST00000420138 SMURF2Q9HAU4 748 aa19.62■□□□□ 0.73
GPC1-202ENST00000420138 MAT2BQ9NZL9 334 aa19.62■□□□□ 0.73
GPC1-202ENST00000420138 KHNYNO15037 678 aaKnown RBP19.61■□□□□ 0.73
GPC1-202ENST00000420138 PLOD3O60568 738 aa19.61■□□□□ 0.73
GPC1-202ENST00000420138 NR2F1P10589 423 aa19.61■□□□□ 0.73
GPC1-202ENST00000420138 ARL4DP49703 201 aa19.61■□□□□ 0.73
GPC1-202ENST00000420138 ERV3-1Q14264 604 aa19.61■□□□□ 0.73
GPC1-202ENST00000420138 PUM1Q14671 1186 aaKnown RBP eCLIP19.61■□□□□ 0.73
GPC1-202ENST00000420138 PRAMEF17Q5VTA0 474 aa19.61■□□□□ 0.73
GPC1-202ENST00000420138 TCEAL6Q6IPX3 200 aa19.61■□□□□ 0.73
GPC1-202ENST00000420138 SHQ1Q6PI26 577 aaKnown RBP19.61■□□□□ 0.73
GPC1-202ENST00000420138 TCEAL3Q969E4 200 aa19.61■□□□□ 0.73
GPC1-202ENST00000420138 THSD1Q9NS62 852 aa19.61■□□□□ 0.73
GPC1-202ENST00000420138 CUTCQ9NTM9 273 aa19.61■□□□□ 0.73
GPC1-202ENST00000420138 USE1Q9NZ43 259 aa19.61■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms