RNA–Protein interactions for RNA: ENST00000418375.1

TMEM248-203, Transcript of transmembrane protein 248, humanhuman

TSL 4

Gene TMEM248, Length 545 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-203ENST00000418375 EIF2S3LQ2VIR3 472 aaKnown RBP12.36□□□□□ -0.43
TMEM248-203ENST00000418375 ZNF628Q5EBL2 1059 aa12.36□□□□□ -0.43
TMEM248-203ENST00000418375 ANKRD26P1Q6NSI1 321 aa12.36□□□□□ -0.43
TMEM248-203ENST00000418375 LARP4Q71RC2 724 aaKnown RBP eCLIP12.36□□□□□ -0.43
TMEM248-203ENST00000418375 SPATA19Q7Z5L4 167 aa12.36□□□□□ -0.43
TMEM248-203ENST00000418375 CISD2Q8N5K1 135 aaKnown RBP12.36□□□□□ -0.43
TMEM248-203ENST00000418375 NATD1Q8N6N6 113 aa12.36□□□□□ -0.43
TMEM248-203ENST00000418375 ZNF615Q8N8J6 731 aa12.36□□□□□ -0.43
TMEM248-203ENST00000418375 ZFP28Q8NHY6 868 aa12.36□□□□□ -0.43
TMEM248-203ENST00000418375 SLC22A8Q8TCC7 542 aa12.36□□□□□ -0.43
TMEM248-203ENST00000418375 SSC4DQ8WTU2 575 aa12.36□□□□□ -0.43
TMEM248-203ENST00000418375 ASB15Q8WXK1 588 aa12.36□□□□□ -0.43
TMEM248-203ENST00000418375 TMEM125Q96AQ2 219 aa12.36□□□□□ -0.43
TMEM248-203ENST00000418375 ZBED6CLQ96FA7 236 aaPredicted RBP12.36□□□□□ -0.43
TMEM248-203ENST00000418375 C5orf34Q96MH7 638 aa12.36□□□□□ -0.43
TMEM248-203ENST00000418375 RASL10BQ96S79 203 aa12.36□□□□□ -0.43
TMEM248-203ENST00000418375 WWTR1Q9GZV5 400 aa12.36□□□□□ -0.43
TMEM248-203ENST00000418375 GLIPR2Q9H4G4 154 aa12.36□□□□□ -0.43
TMEM248-203ENST00000418375 TRIM45Q9H8W5 580 aaPredicted RBP12.36□□□□□ -0.43
TMEM248-203ENST00000418375 LIN28AQ9H9Z2 209 aaKnown RBP12.36□□□□□ -0.43
TMEM248-203ENST00000418375 ATAD3AQ9NVI7 634 aa12.36□□□□□ -0.43
TMEM248-203ENST00000418375 ASF1BQ9NVP2 202 aa12.36□□□□□ -0.43
TMEM248-203ENST00000418375 PRODH2Q9UF12 536 aa12.36□□□□□ -0.43
TMEM248-203ENST00000418375 ATP6V1HQ9UI12 483 aa12.36□□□□□ -0.43
TMEM248-203ENST00000418375 ZNF639Q9UID6 485 aa12.36□□□□□ -0.43
TMEM248-203ENST00000418375 PCDHGA10Q9Y5H3 936 aa12.36□□□□□ -0.43
TMEM248-203ENST00000418375 A8MVJ9 347 aa12.35□□□□□ -0.43
TMEM248-203ENST00000418375 SEMA7AO75326 666 aa12.35□□□□□ -0.43
TMEM248-203ENST00000418375 CLPSP04118 112 aa12.35□□□□□ -0.43
TMEM248-203ENST00000418375 S1PR1P21453 382 aa12.35□□□□□ -0.43
TMEM248-203ENST00000418375 EPHA3P29320 983 aa12.35□□□□□ -0.43
TMEM248-203ENST00000418375 PTGER1P34995 402 aa12.35□□□□□ -0.43
TMEM248-203ENST00000418375 CLDN8P56748 225 aa12.35□□□□□ -0.43
TMEM248-203ENST00000418375 MRPS35P82673 323 aaKnown RBP12.35□□□□□ -0.43
TMEM248-203ENST00000418375 PRSS53Q2L4Q9 553 aa12.35□□□□□ -0.43
TMEM248-203ENST00000418375 TRMT12Q53H54 448 aaKnown RBP12.35□□□□□ -0.43
TMEM248-203ENST00000418375 PIGGQ5H8A4 983 aa12.35□□□□□ -0.43
TMEM248-203ENST00000418375 ZNF766Q5HY98 468 aa12.35□□□□□ -0.43
TMEM248-203ENST00000418375 NXNQ6DKJ4 435 aa12.35□□□□□ -0.43
TMEM248-203ENST00000418375 OGFOD2Q6N063 350 aa12.35□□□□□ -0.43
TMEM248-203ENST00000418375 RPUSD3Q6P087 351 aaKnown RBP12.35□□□□□ -0.43
TMEM248-203ENST00000418375 OPN5Q6U736 354 aa12.35□□□□□ -0.43
TMEM248-203ENST00000418375 C16orf47Q6ZP98 133 aaPredicted RBP12.35□□□□□ -0.43
TMEM248-203ENST00000418375 RGS9BPQ6ZS82 235 aa12.35□□□□□ -0.43
TMEM248-203ENST00000418375 TAGAPQ8N103 731 aa12.35□□□□□ -0.43
TMEM248-203ENST00000418375 CYP4Z2PQ8N1L4 340 aa12.35□□□□□ -0.43
TMEM248-203ENST00000418375 SLC15A4Q8N697 577 aa12.35□□□□□ -0.43
TMEM248-203ENST00000418375 TMEM178AQ8NBL3 297 aa12.35□□□□□ -0.43
TMEM248-203ENST00000418375 MDS2Q8NDY4 140 aa12.35□□□□□ -0.43
TMEM248-203ENST00000418375 OR52R1Q8NGF1 315 aa12.35□□□□□ -0.43
TMEM248-203ENST00000418375 PRR7Q8TB68 274 aa12.35□□□□□ -0.43
TMEM248-203ENST00000418375 KAT2AQ92830 837 aa12.35□□□□□ -0.43
TMEM248-203ENST00000418375 TP53INP1Q96A56 240 aa12.35□□□□□ -0.43
TMEM248-203ENST00000418375 AMDHD1Q96NU7 426 aa12.35□□□□□ -0.43
TMEM248-203ENST00000418375 WDR55Q9H6Y2 383 aaPredicted RBP12.35□□□□□ -0.43
TMEM248-203ENST00000418375 SLCO1B3Q9NPD5 702 aa12.35□□□□□ -0.43
TMEM248-203ENST00000418375 ACSS1Q9NUB1 689 aaPredicted RBP12.35□□□□□ -0.43
TMEM248-203ENST00000418375 HPF1Q9NWY4 346 aa12.35□□□□□ -0.43
TMEM248-203ENST00000418375 ERVK-11Q9UQG0 969 aa12.35□□□□□ -0.43
TMEM248-203ENST00000418375 PCDHGB6Q9Y5F9 930 aa12.35□□□□□ -0.43
TMEM248-203ENST00000418375 COPG1Q9Y678 874 aaKnown RBP12.35□□□□□ -0.43
TMEM248-203ENST00000418375 USH1CQ9Y6N9 552 aa12.35□□□□□ -0.43
TMEM248-203ENST00000418375 A0A087WV62 115 aa12.34□□□□□ -0.43
TMEM248-203ENST00000418375 GOLGA8QA0A0J9YX86 632 aa12.34□□□□□ -0.43
TMEM248-203ENST00000418375 GOLGA8OA6NCC3 632 aa12.34□□□□□ -0.43
TMEM248-203ENST00000418375 GOLGA8NF8WBI6 632 aa12.34□□□□□ -0.43
TMEM248-203ENST00000418375 PLOD2O00469 737 aa12.34□□□□□ -0.43
TMEM248-203ENST00000418375 PLOD3O60568 738 aa12.34□□□□□ -0.43
TMEM248-203ENST00000418375 DIAPH2O60879 1101 aa12.34□□□□□ -0.43
TMEM248-203ENST00000418375 COQ9O75208 318 aa12.34□□□□□ -0.43
TMEM248-203ENST00000418375 TGDSO95455 350 aa12.34□□□□□ -0.43
TMEM248-203ENST00000418375 CBX7O95931 251 aa12.34□□□□□ -0.43
TMEM248-203ENST00000418375 IFI6P09912 130 aa12.34□□□□□ -0.43
TMEM248-203ENST00000418375 GPC1P35052 558 aa12.34□□□□□ -0.43
TMEM248-203ENST00000418375 ST13P50502 369 aaKnown RBP12.34□□□□□ -0.43
TMEM248-203ENST00000418375 DIO3P55073 304 aa12.34□□□□□ -0.43
TMEM248-203ENST00000418375 MANFP55145 182 aaKnown RBP12.34□□□□□ -0.43
TMEM248-203ENST00000418375 C21orf58P58505 322 aa12.34□□□□□ -0.43
TMEM248-203ENST00000418375 EXOSC7Q15024 291 aaKnown RBP12.34□□□□□ -0.43
TMEM248-203ENST00000418375 INAQ16352 499 aa12.34□□□□□ -0.43
TMEM248-203ENST00000418375 ZNF385BQ569K4 471 aa12.34□□□□□ -0.43
TMEM248-203ENST00000418375 CPTPQ5TA50 214 aa12.34□□□□□ -0.43
TMEM248-203ENST00000418375 ZNF468Q5VIY5 522 aaPredicted RBP12.34□□□□□ -0.43
TMEM248-203ENST00000418375 SPINK14Q6IE38 97 aa12.34□□□□□ -0.43
TMEM248-203ENST00000418375 SLC25A25Q6KCM7 469 aa12.34□□□□□ -0.43
TMEM248-203ENST00000418375 FAM47EQ6ZV65 393 aa12.34□□□□□ -0.43
TMEM248-203ENST00000418375 C17orf47Q8NEP4 570 aa12.34□□□□□ -0.43
TMEM248-203ENST00000418375 OR7A2PQ8NGA2 310 aa12.34□□□□□ -0.43
TMEM248-203ENST00000418375 C16orf52Q8NHV5 167 aa12.34□□□□□ -0.43
TMEM248-203ENST00000418375 ACTRT2Q8TDY3 377 aa12.34□□□□□ -0.43
TMEM248-203ENST00000418375 CIDECQ96AQ7 238 aaPredicted RBP12.34□□□□□ -0.43
TMEM248-203ENST00000418375 MAELQ96JY0 434 aaKnown RBP12.34□□□□□ -0.43
TMEM248-203ENST00000418375 SIGLEC12Q96PQ1 595 aa12.34□□□□□ -0.43
TMEM248-203ENST00000418375 PHF12Q96QT6 1004 aa12.34□□□□□ -0.43
TMEM248-203ENST00000418375 DPY30Q9C005 99 aa12.34□□□□□ -0.43
TMEM248-203ENST00000418375 DDX18Q9NVP1 670 aaKnown RBP12.34□□□□□ -0.43
TMEM248-203ENST00000418375 PLEKHB1Q9UF11 243 aaPredicted RBP12.34□□□□□ -0.43
TMEM248-203ENST00000418375 PRRC2CQ9Y520 2896 aaKnown RBP12.34□□□□□ -0.43
TMEM248-203ENST00000418375 CNTRLQ7Z7A1 2325 aa12.33□□□□□ -0.44
TMEM248-203ENST00000418375 CAPN14A8MX76 684 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms