RNA–Protein interactions for RNA: ENST00000415083.6

SS18-203, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SS18, Length 3,414 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-203ENST00000415083 KPNA3O00505 521 aaPredicted RBP9.3□□□□□ -0.92
SS18-203ENST00000415083 PGRMC2O15173 223 aa9.3□□□□□ -0.92
SS18-203ENST00000415083 PDPK1O15530 556 aa9.3□□□□□ -0.92
SS18-203ENST00000415083 NCR1O76036 304 aa9.3□□□□□ -0.92
SS18-203ENST00000415083 CSF2RAP15509 400 aa9.3□□□□□ -0.92
SS18-203ENST00000415083 TRHRP34981 398 aaPredicted RBP9.3□□□□□ -0.92
SS18-203ENST00000415083 SOX6P35712 828 aa9.3□□□□□ -0.92
SS18-203ENST00000415083 GIPRP48546 466 aa9.3□□□□□ -0.92
SS18-203ENST00000415083 DAB2P98082 770 aa9.3□□□□□ -0.92
SS18-203ENST00000415083 GINS1Q14691 196 aa9.3□□□□□ -0.92
SS18-203ENST00000415083 P2RY14Q15391 338 aa9.3□□□□□ -0.92
SS18-203ENST00000415083 C1orf94Q6P1W5 598 aa9.3□□□□□ -0.92
SS18-203ENST00000415083 IQCHQ86VS3 1027 aa9.3□□□□□ -0.92
SS18-203ENST00000415083 RDH10Q8IZV5 341 aa9.3□□□□□ -0.92
SS18-203ENST00000415083 ARIH2OSQ8N7S6 290 aa9.3□□□□□ -0.92
SS18-203ENST00000415083 SLAIN1Q8ND83 568 aa9.3□□□□□ -0.92
SS18-203ENST00000415083 SIMC1Q8NDZ2 872 aa9.3□□□□□ -0.92
SS18-203ENST00000415083 OR8J1Q8NGP2 316 aa9.3□□□□□ -0.92
SS18-203ENST00000415083 GATAD2BQ8WXI9 593 aa9.3□□□□□ -0.92
SS18-203ENST00000415083 NUS1Q96E22 293 aa9.3□□□□□ -0.92
SS18-203ENST00000415083 C16orf58Q96GQ5 468 aa9.3□□□□□ -0.92
SS18-203ENST00000415083 LRR1Q96L50 414 aa9.3□□□□□ -0.92
SS18-203ENST00000415083 FOPNLQ96NB1 174 aa9.3□□□□□ -0.92
SS18-203ENST00000415083 AMDHD1Q96NU7 426 aa9.3□□□□□ -0.92
SS18-203ENST00000415083 MND1Q9BWT6 205 aa9.3□□□□□ -0.92
SS18-203ENST00000415083 RANGRFQ9HD47 186 aaPredicted RBP9.3□□□□□ -0.92
SS18-203ENST00000415083 SEMA3GQ9NS98 782 aa9.3□□□□□ -0.92
SS18-203ENST00000415083 TBC1D14Q9P2M4 693 aa9.3□□□□□ -0.92
SS18-203ENST00000415083 SEC14L4Q9UDX3 406 aa9.3□□□□□ -0.92
SS18-203ENST00000415083 CMAHPQ9Y471 501 aa9.3□□□□□ -0.92
SS18-203ENST00000415083 SCN3AQ9NY46 2000 aa9.3□□□□□ -0.92
SS18-203ENST00000415083 PDZK1P1A8MUH7 402 aa9.3□□□□□ -0.92
SS18-203ENST00000415083 GPC1P35052 558 aa9.3□□□□□ -0.92
SS18-203ENST00000415083 DDOSTP39656 456 aa9.3□□□□□ -0.92
SS18-203ENST00000415083 RORCP51449 518 aa9.3□□□□□ -0.92
SS18-203ENST00000415083 MAPK12P53778 367 aa9.3□□□□□ -0.92
SS18-203ENST00000415083 MRPS15P82914 257 aaKnown RBP9.3□□□□□ -0.92
SS18-203ENST00000415083 ALDH6A1Q02252 535 aaKnown RBP9.3□□□□□ -0.92
SS18-203ENST00000415083 HEPACAMQ14CZ8 416 aa9.3□□□□□ -0.92
SS18-203ENST00000415083 DHCR24Q15392 516 aa9.3□□□□□ -0.92
SS18-203ENST00000415083 RAET1GQ6H3X3 334 aa9.3□□□□□ -0.92
SS18-203ENST00000415083 ZNF517Q6ZMY9 492 aaPredicted RBP9.3□□□□□ -0.92
SS18-203ENST00000415083 OR4K5Q8NGD3 323 aa9.3□□□□□ -0.92
SS18-203ENST00000415083 OR52P1PQ8NH57 321 aa9.3□□□□□ -0.92
SS18-203ENST00000415083 SETD7Q8WTS6 366 aaKnown RBP9.3□□□□□ -0.92
SS18-203ENST00000415083 ZFPM2Q8WW38 1151 aa9.3□□□□□ -0.92
SS18-203ENST00000415083 C6orf106Q9H6K1 298 aaPredicted RBP9.3□□□□□ -0.92
SS18-203ENST00000415083 MRPS18AQ9NVS2 196 aaKnown RBP9.3□□□□□ -0.92
SS18-203ENST00000415083 SCN2AQ99250 2005 aa9.29□□□□□ -0.92
SS18-203ENST00000415083 A0A087WUU8 490 aa9.29□□□□□ -0.92
SS18-203ENST00000415083 A0A0G2JMP0 313 aa9.29□□□□□ -0.92
SS18-203ENST00000415083 SCO2O43819 266 aa9.29□□□□□ -0.92
SS18-203ENST00000415083 TFPIP10646 304 aa9.29□□□□□ -0.92
SS18-203ENST00000415083 CEBPBP17676 345 aa9.29□□□□□ -0.92
SS18-203ENST00000415083 TIE1P35590 1138 aa9.29□□□□□ -0.92
SS18-203ENST00000415083 RECQLP46063 649 aaPredicted RBP9.29□□□□□ -0.92
SS18-203ENST00000415083 CCT3P49368 545 aaKnown RBP9.29□□□□□ -0.92
SS18-203ENST00000415083 REEP5Q00765 189 aa9.29□□□□□ -0.92
SS18-203ENST00000415083 ASAH1Q13510 395 aa9.29□□□□□ -0.92
SS18-203ENST00000415083 ENTPD8Q5MY95 495 aa9.29□□□□□ -0.92
SS18-203ENST00000415083 DGLUCYQ7Z3D6 616 aa9.29□□□□□ -0.92
SS18-203ENST00000415083 PDZD3Q86UT5 571 aa9.29□□□□□ -0.92
SS18-203ENST00000415083 TAGAPQ8N103 731 aa9.29□□□□□ -0.92
SS18-203ENST00000415083 OR9Q1Q8NGQ5 310 aa9.29□□□□□ -0.92
SS18-203ENST00000415083 OR4Q3Q8NH05 313 aa9.29□□□□□ -0.92
SS18-203ENST00000415083 HCAR2Q8TDS4 363 aa9.29□□□□□ -0.92
SS18-203ENST00000415083 ZNF296Q8WUU4 475 aaPredicted RBP9.29□□□□□ -0.92
SS18-203ENST00000415083 ZFYVE19Q96K21 471 aa9.29□□□□□ -0.92
SS18-203ENST00000415083 DPEP2Q9H4A9 486 aa9.29□□□□□ -0.92
SS18-203ENST00000415083 PPP1R3EQ9H7J1 279 aa9.29□□□□□ -0.92
SS18-203ENST00000415083 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP9.29□□□□□ -0.92
SS18-203ENST00000415083 NUFIP1Q9UHK0 495 aaKnown RBP9.29□□□□□ -0.92
SS18-203ENST00000415083 WBP11Q9Y2W2 641 aaKnown RBP9.29□□□□□ -0.92
SS18-203ENST00000415083 C17orf113A0A1B0GUU1 675 aa9.29□□□□□ -0.92
SS18-203ENST00000415083 LGI1O95970 557 aa9.29□□□□□ -0.92
SS18-203ENST00000415083 IFNA14P01570 189 aa9.29□□□□□ -0.92
SS18-203ENST00000415083 CSF2P04141 144 aa9.29□□□□□ -0.92
SS18-203ENST00000415083 APEX1P27695 318 aaKnown RBP9.29□□□□□ -0.92
SS18-203ENST00000415083 DPTQ07507 201 aa9.29□□□□□ -0.92
SS18-203ENST00000415083 TBRG1Q3YBR2 411 aa9.29□□□□□ -0.92
SS18-203ENST00000415083 CD200R1LQ6Q8B3 271 aa9.29□□□□□ -0.92
SS18-203ENST00000415083 TMPRSS11AQ6ZMR5 421 aa9.29□□□□□ -0.92
SS18-203ENST00000415083 QSOX2Q6ZRP7 698 aa9.29□□□□□ -0.92
SS18-203ENST00000415083 ETFBKMTQ8IXQ9 262 aa9.29□□□□□ -0.92
SS18-203ENST00000415083 BBS1Q8NFJ9 593 aa9.29□□□□□ -0.92
SS18-203ENST00000415083 SETD6Q8TBK2 473 aa9.29□□□□□ -0.92
SS18-203ENST00000415083 TRIM43Q96BQ3 446 aaPredicted RBP9.29□□□□□ -0.92
SS18-203ENST00000415083 ASF1AQ9Y294 204 aa9.29□□□□□ -0.92
SS18-203ENST00000415083 DNMT3AQ9Y6K1 912 aaPredicted RBP9.29□□□□□ -0.92
SS18-203ENST00000415083 MYO10Q9HD67 2058 aa9.28□□□□□ -0.92
SS18-203ENST00000415083 IQCJ-SCHIP1C9J366 451 aaPredicted RBP9.28□□□□□ -0.92
SS18-203ENST00000415083 LATO43561 262 aa9.28□□□□□ -0.92
SS18-203ENST00000415083 HOXD10P28358 340 aa9.28□□□□□ -0.92
SS18-203ENST00000415083 AGFG1P52594 562 aaKnown RBP9.28□□□□□ -0.92
SS18-203ENST00000415083 CSNK1G2P78368 415 aa9.28□□□□□ -0.92
SS18-203ENST00000415083 CAMK1Q14012 370 aa9.28□□□□□ -0.92
SS18-203ENST00000415083 SLC35F1Q5T1Q4 408 aa9.28□□□□□ -0.92
SS18-203ENST00000415083 PAMR1Q6UXH9 720 aa9.28□□□□□ -0.92
SS18-203ENST00000415083 SLC7A6Q92536 515 aa9.28□□□□□ -0.92
SS18-203ENST00000415083 CNRIP1Q96F85 164 aaPredicted RBP9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms