RNA–Protein interactions for RNA: ENST00000414963.2

SF3B1-204, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SF3B1, Length 651 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-204ENST00000414963 FBXW8Q8N3Y1 598 aa13.29□□□□□ -0.28
SF3B1-204ENST00000414963 MORN4Q8NDC4 146 aa13.29□□□□□ -0.28
SF3B1-204ENST00000414963 NUP43Q8NFH3 380 aa13.29□□□□□ -0.28
SF3B1-204ENST00000414963 OR5AK3PQ8NH89 298 aa13.29□□□□□ -0.28
SF3B1-204ENST00000414963 HOXB13Q92826 284 aaPredicted RBP13.29□□□□□ -0.28
SF3B1-204ENST00000414963 MCUR1Q96AQ8 359 aa13.29□□□□□ -0.28
SF3B1-204ENST00000414963 GIMAP5Q96F15 307 aa13.29□□□□□ -0.28
SF3B1-204ENST00000414963 ART5Q96L15 291 aa13.29□□□□□ -0.28
SF3B1-204ENST00000414963 ZNF583Q96ND8 569 aa13.29□□□□□ -0.28
SF3B1-204ENST00000414963 ECSITQ9BQ95 431 aa13.29□□□□□ -0.28
SF3B1-204ENST00000414963 WDR77Q9BQA1 342 aaPredicted RBP13.29□□□□□ -0.28
SF3B1-204ENST00000414963 SPATA9Q9BWV2 254 aa13.29□□□□□ -0.28
SF3B1-204ENST00000414963 DDX18Q9NVP1 670 aaKnown RBP13.29□□□□□ -0.28
SF3B1-204ENST00000414963 ADA2Q9NZK5 511 aa13.29□□□□□ -0.28
SF3B1-204ENST00000414963 KCND3Q9UK17 655 aa13.29□□□□□ -0.28
SF3B1-204ENST00000414963 KLK13Q9UKR3 277 aa13.29□□□□□ -0.28
SF3B1-204ENST00000414963 CLCA3PQ9Y6N3 262 aa13.29□□□□□ -0.28
SF3B1-204ENST00000414963 SDK2Q58EX2 2172 aa13.29□□□□□ -0.28
SF3B1-204ENST00000414963 LOC101059948A0A1B0GTJ6 334 aa13.28□□□□□ -0.28
SF3B1-204ENST00000414963 CFAP73A6NFT4 308 aa13.28□□□□□ -0.28
SF3B1-204ENST00000414963 COQ9O75208 318 aa13.28□□□□□ -0.28
SF3B1-204ENST00000414963 TNFRSF21O75509 655 aa13.28□□□□□ -0.28
SF3B1-204ENST00000414963 SOX30O94993 753 aa13.28□□□□□ -0.28
SF3B1-204ENST00000414963 HMGN2P05204 90 aaKnown RBP13.28□□□□□ -0.28
SF3B1-204ENST00000414963 LIPCP11150 499 aa13.28□□□□□ -0.28
SF3B1-204ENST00000414963 DLSTP36957 453 aa13.28□□□□□ -0.28
SF3B1-204ENST00000414963 MAP3K8P41279 467 aa13.28□□□□□ -0.28
SF3B1-204ENST00000414963 MAN2A2P49641 1150 aa13.28□□□□□ -0.28
SF3B1-204ENST00000414963 GPR143P51810 404 aa13.28□□□□□ -0.28
SF3B1-204ENST00000414963 LIPEQ05469 1076 aa13.28□□□□□ -0.28
SF3B1-204ENST00000414963 DUSP8Q13202 625 aa13.28□□□□□ -0.28
SF3B1-204ENST00000414963 TP53BP2Q13625 1128 aa13.28□□□□□ -0.28
SF3B1-204ENST00000414963 FXNQ16595 210 aa13.28□□□□□ -0.28
SF3B1-204ENST00000414963 SFT2D3Q587I9 215 aa13.28□□□□□ -0.28
SF3B1-204ENST00000414963 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.28□□□□□ -0.28
SF3B1-204ENST00000414963 MFSD12Q6NUT3 480 aa13.28□□□□□ -0.28
SF3B1-204ENST00000414963 RNF130Q86XS8 419 aa13.28□□□□□ -0.28
SF3B1-204ENST00000414963 ULK2Q8IYT8 1036 aa13.28□□□□□ -0.28
SF3B1-204ENST00000414963 ZNF615Q8N8J6 731 aa13.28□□□□□ -0.28
SF3B1-204ENST00000414963 NFAM1Q8NET5 270 aaPredicted RBP13.28□□□□□ -0.28
SF3B1-204ENST00000414963 UTP4Q969X6 686 aaKnown RBP13.28□□□□□ -0.28
SF3B1-204ENST00000414963 MAGED4Q96JG8 741 aa13.28□□□□□ -0.28
SF3B1-204ENST00000414963 MS4A4EQ96PG1 132 aa13.28□□□□□ -0.28
SF3B1-204ENST00000414963 TRIM8Q9BZR9 551 aa13.28□□□□□ -0.28
SF3B1-204ENST00000414963 ZNF700Q9H0M5 742 aa13.28□□□□□ -0.28
SF3B1-204ENST00000414963 THUMPD1Q9NXG2 353 aaKnown RBP13.28□□□□□ -0.28
SF3B1-204ENST00000414963 AK5Q9Y6K8 562 aa13.28□□□□□ -0.28
SF3B1-204ENST00000414963 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.28□□□□□ -0.28
SF3B1-204ENST00000414963 AHCTF1Q8WYP5 2266 aa13.27□□□□□ -0.28
SF3B1-204ENST00000414963 SAGE2PA6NJ88 616 aa13.27□□□□□ -0.29
SF3B1-204ENST00000414963 TTC36A6NLP5 189 aa13.27□□□□□ -0.29
SF3B1-204ENST00000414963 HRKO00198 91 aa13.27□□□□□ -0.29
SF3B1-204ENST00000414963 ASNA1O43681 348 aa13.27□□□□□ -0.29
SF3B1-204ENST00000414963 PRAMEF2O60811 474 aa13.27□□□□□ -0.29
SF3B1-204ENST00000414963 CLPSP04118 112 aa13.27□□□□□ -0.29
SF3B1-204ENST00000414963 F8A1P23610 371 aa13.27□□□□□ -0.29
SF3B1-204ENST00000414963 PRIM2P49643 509 aa13.27□□□□□ -0.29
SF3B1-204ENST00000414963 GSK3BP49841 420 aa13.27□□□□□ -0.29
SF3B1-204ENST00000414963 EMDP50402 254 aa13.27□□□□□ -0.29
SF3B1-204ENST00000414963 ANXA11P50995 505 aaKnown RBP13.27□□□□□ -0.29
SF3B1-204ENST00000414963 KCNJ2P63252 427 aa13.27□□□□□ -0.29
SF3B1-204ENST00000414963 ADRM1Q16186 407 aa13.27□□□□□ -0.29
SF3B1-204ENST00000414963 TBC1D25Q3MII6 688 aa13.27□□□□□ -0.29
SF3B1-204ENST00000414963 COX20Q5RI15 118 aa13.27□□□□□ -0.29
SF3B1-204ENST00000414963 FAAH2Q6GMR7 532 aa13.27□□□□□ -0.29
SF3B1-204ENST00000414963 C10orf111Q8N326 155 aa13.27□□□□□ -0.29
SF3B1-204ENST00000414963 SIMC1Q8NDZ2 872 aa13.27□□□□□ -0.29
SF3B1-204ENST00000414963 OR52R1Q8NGF1 315 aa13.27□□□□□ -0.29
SF3B1-204ENST00000414963 OR1N1Q8NGS0 311 aa13.27□□□□□ -0.29
SF3B1-204ENST00000414963 OR10A6Q8NH74 314 aa13.27□□□□□ -0.29
SF3B1-204ENST00000414963 PNPT1Q8TCS8 783 aaKnown RBP13.27□□□□□ -0.29
SF3B1-204ENST00000414963 SLC2A12Q8TD20 617 aa13.27□□□□□ -0.29
SF3B1-204ENST00000414963 ZNF721Q8TF20 911 aa13.27□□□□□ -0.29
SF3B1-204ENST00000414963 REXO5Q96IC2 774 aaKnown RBP13.27□□□□□ -0.29
SF3B1-204ENST00000414963 SLC35G5Q96KT7 338 aa13.27□□□□□ -0.29
SF3B1-204ENST00000414963 RAB3IPQ96QF0 476 aaPredicted RBP13.27□□□□□ -0.29
SF3B1-204ENST00000414963 LPAR4Q99677 370 aa13.27□□□□□ -0.29
SF3B1-204ENST00000414963 TMEM121BQ9BXQ6 578 aaPredicted RBP13.27□□□□□ -0.29
SF3B1-204ENST00000414963 ACTRT3Q9BYD9 372 aa13.27□□□□□ -0.29
SF3B1-204ENST00000414963 SEMA4CQ9C0C4 833 aa13.27□□□□□ -0.29
SF3B1-204ENST00000414963 SERHL2Q9H4I8 314 aa13.27□□□□□ -0.29
SF3B1-204ENST00000414963 ALG2Q9H553 416 aa13.27□□□□□ -0.29
SF3B1-204ENST00000414963 TMEM38AQ9H6F2 299 aa13.27□□□□□ -0.29
SF3B1-204ENST00000414963 ANKRA2Q9H9E1 313 aa13.27□□□□□ -0.29
SF3B1-204ENST00000414963 GIN1Q9NXP7 522 aa13.27□□□□□ -0.29
SF3B1-204ENST00000414963 ERVK-19Q9WJR5 959 aa13.27□□□□□ -0.29
SF3B1-204ENST00000414963 MSRB2Q9Y3D2 182 aa13.27□□□□□ -0.29
SF3B1-204ENST00000414963 HS3ST3B1Q9Y662 390 aa13.27□□□□□ -0.29
SF3B1-204ENST00000414963 DUXAA6NLW8 204 aa13.26□□□□□ -0.29
SF3B1-204ENST00000414963 OR6C76A6NM76 312 aa13.26□□□□□ -0.29
SF3B1-204ENST00000414963 A8MUA0 341 aa13.26□□□□□ -0.29
SF3B1-204ENST00000414963 FAM220BPB1ANY3 271 aa13.26□□□□□ -0.29
SF3B1-204ENST00000414963 SOCS6O14544 535 aa13.26□□□□□ -0.29
SF3B1-204ENST00000414963 AGR2O95994 175 aa13.26□□□□□ -0.29
SF3B1-204ENST00000414963 ETFAP13804 333 aa13.26□□□□□ -0.29
SF3B1-204ENST00000414963 NQO1P15559 274 aaKnown RBP13.26□□□□□ -0.29
SF3B1-204ENST00000414963 MATN1P21941 496 aa13.26□□□□□ -0.29
SF3B1-204ENST00000414963 ME2P23368 584 aa13.26□□□□□ -0.29
SF3B1-204ENST00000414963 HTR1EP28566 365 aa13.26□□□□□ -0.29
SF3B1-204ENST00000414963 SSTR4P31391 388 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms