RNA–Protein interactions for RNA: ENST00000413582.6

RFFL-203, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene RFFL, Length 1,217 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-203ENST00000413582 ACOT4Q8N9L9 421 aa8.71□□□□□ -1.02
RFFL-203ENST00000413582 OR2W6PQ8NHA6 318 aa8.71□□□□□ -1.02
RFFL-203ENST00000413582 UHMK1Q8TAS1 419 aaKnown RBP8.71□□□□□ -1.02
RFFL-203ENST00000413582 ZPLD1Q8TCW7 415 aa8.71□□□□□ -1.02
RFFL-203ENST00000413582 DOK4Q8TEW6 326 aa8.71□□□□□ -1.02
RFFL-203ENST00000413582 ABTB1Q969K4 478 aaPredicted RBP8.71□□□□□ -1.02
RFFL-203ENST00000413582 PPWD1Q96BP3 646 aaKnown RBP8.71□□□□□ -1.02
RFFL-203ENST00000413582 RHBDF1Q96CC6 855 aa8.71□□□□□ -1.02
RFFL-203ENST00000413582 ZFP3Q96NJ6 502 aa8.71□□□□□ -1.02
RFFL-203ENST00000413582 PAFAH2Q99487 392 aa8.71□□□□□ -1.02
RFFL-203ENST00000413582 TUBA1CQ9BQE3 449 aa8.71□□□□□ -1.02
RFFL-203ENST00000413582 TMEM79Q9BSE2 394 aa8.71□□□□□ -1.02
RFFL-203ENST00000413582 MS4A8Q9BY19 250 aa8.71□□□□□ -1.02
RFFL-203ENST00000413582 GSX2Q9BZM3 304 aa8.71□□□□□ -1.02
RFFL-203ENST00000413582 ROGDIQ9GZN7 287 aa8.71□□□□□ -1.02
RFFL-203ENST00000413582 EHD1Q9H4M9 534 aa8.71□□□□□ -1.02
RFFL-203ENST00000413582 UBTD1Q9HAC8 227 aa8.71□□□□□ -1.02
RFFL-203ENST00000413582 SDAD1Q9NVU7 687 aaKnown RBP eCLIP8.71□□□□□ -1.02
RFFL-203ENST00000413582 FAM53CQ9NYF3 392 aa8.71□□□□□ -1.02
RFFL-203ENST00000413582 GPRC5BQ9NZH0 403 aa8.71□□□□□ -1.02
RFFL-203ENST00000413582 TXNDC16Q9P2K2 825 aa8.71□□□□□ -1.02
RFFL-203ENST00000413582 ZNF490Q9ULM2 529 aaPredicted RBP8.71□□□□□ -1.02
RFFL-203ENST00000413582 VWA7Q9Y334 891 aa8.71□□□□□ -1.02
RFFL-203ENST00000413582 CR1P17927 2039 aa8.71□□□□□ -1.02
RFFL-203ENST00000413582 PRR14LQ5THK1 2151 aa8.71□□□□□ -1.02
RFFL-203ENST00000413582 CUBNO60494 3623 aa8.7□□□□□ -1.02
RFFL-203ENST00000413582 TLDC2A0PJX2 215 aa8.7□□□□□ -1.02
RFFL-203ENST00000413582 RNF212BA8MTL3 300 aa8.7□□□□□ -1.02
RFFL-203ENST00000413582 DYRK3O43781 588 aa8.7□□□□□ -1.02
RFFL-203ENST00000413582 RCBTB2O95199 551 aa8.7□□□□□ -1.02
RFFL-203ENST00000413582 SNX4O95219 450 aa8.7□□□□□ -1.02
RFFL-203ENST00000413582 CLPSP04118 112 aa8.7□□□□□ -1.02
RFFL-203ENST00000413582 CYP4B1P13584 511 aa8.7□□□□□ -1.02
RFFL-203ENST00000413582 FPR1P21462 350 aa8.7□□□□□ -1.02
RFFL-203ENST00000413582 HIST1H1TP22492 207 aaPredicted RBP8.7□□□□□ -1.02
RFFL-203ENST00000413582 CPN2P22792 545 aa8.7□□□□□ -1.02
RFFL-203ENST00000413582 CCKARP32238 428 aa8.7□□□□□ -1.02
RFFL-203ENST00000413582 CPOXP36551 454 aa8.7□□□□□ -1.02
RFFL-203ENST00000413582 MASP1P48740 699 aa8.7□□□□□ -1.02
RFFL-203ENST00000413582 PTH2RP49190 550 aa8.7□□□□□ -1.02
RFFL-203ENST00000413582 NAGLUP54802 743 aa8.7□□□□□ -1.02
RFFL-203ENST00000413582 FBXW4P57775 412 aa8.7□□□□□ -1.02
RFFL-203ENST00000413582 HERVK_113P63132 956 aa8.7□□□□□ -1.02
RFFL-203ENST00000413582 ERVK-8P63133 956 aa8.7□□□□□ -1.02
RFFL-203ENST00000413582 ZNF460Q14592 562 aa8.7□□□□□ -1.02
RFFL-203ENST00000413582 TSNQ15631 228 aaKnown RBP8.7□□□□□ -1.02
RFFL-203ENST00000413582 SPRED3Q2MJR0 410 aa8.7□□□□□ -1.02
RFFL-203ENST00000413582 WIPI1Q5MNZ9 446 aaPredicted RBP8.7□□□□□ -1.02
RFFL-203ENST00000413582 PLXDC2Q6UX71 529 aa8.7□□□□□ -1.02
RFFL-203ENST00000413582 RNF111Q6ZNA4 994 aa8.7□□□□□ -1.02
RFFL-203ENST00000413582 TIFABQ6ZNK6 161 aa8.7□□□□□ -1.02
RFFL-203ENST00000413582 C20orf204Q6ZNR8 217 aa8.7□□□□□ -1.02
RFFL-203ENST00000413582 SLC29A4Q7RTT9 530 aa8.7□□□□□ -1.02
RFFL-203ENST00000413582 ADAMTSL2Q86TH1 951 aa8.7□□□□□ -1.02
RFFL-203ENST00000413582 ZC3HC1Q86WB0 502 aaKnown RBP8.7□□□□□ -1.02
RFFL-203ENST00000413582 GCNT2Q8N0V5 402 aa8.7□□□□□ -1.02
RFFL-203ENST00000413582 C7orf57Q8NEG2 295 aa8.7□□□□□ -1.02
RFFL-203ENST00000413582 SPPL2AQ8TCT8 520 aa8.7□□□□□ -1.02
RFFL-203ENST00000413582 DCAKDQ8WVC6 231 aa8.7□□□□□ -1.02
RFFL-203ENST00000413582 INTS12Q96CB8 462 aaKnown RBP8.7□□□□□ -1.02
RFFL-203ENST00000413582 WDR34Q96EX3 536 aa8.7□□□□□ -1.02
RFFL-203ENST00000413582 MARK4Q96L34 752 aa8.7□□□□□ -1.02
RFFL-203ENST00000413582 ATP6V1G3Q96LB4 118 aa8.7□□□□□ -1.02
RFFL-203ENST00000413582 GNRHR2Q96P88 292 aa8.7□□□□□ -1.02
RFFL-203ENST00000413582 PIGQQ9BRB3 760 aa8.7□□□□□ -1.02
RFFL-203ENST00000413582 TBCDQ9BTW9 1192 aa8.7□□□□□ -1.02
RFFL-203ENST00000413582 ERVK-6Q9BXR3 956 aa8.7□□□□□ -1.02
RFFL-203ENST00000413582 ANGPTL4Q9BY76 406 aa8.7□□□□□ -1.02
RFFL-203ENST00000413582 PIGMQ9H3S5 423 aa8.7□□□□□ -1.02
RFFL-203ENST00000413582 TEX10Q9NXF1 929 aaPredicted RBP8.7□□□□□ -1.02
RFFL-203ENST00000413582 CLCF1Q9UBD9 225 aa8.7□□□□□ -1.02
RFFL-203ENST00000413582 NDRG3Q9UGV2 375 aa8.7□□□□□ -1.02
RFFL-203ENST00000413582 PACSIN3Q9UKS6 424 aa8.7□□□□□ -1.02
RFFL-203ENST00000413582 ERVK-19Q9WJR5 959 aa8.7□□□□□ -1.02
RFFL-203ENST00000413582 SPACA6W5XKT8 324 aa8.7□□□□□ -1.02
RFFL-203ENST00000413582 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.7□□□□□ -1.022e-6■■□□□ 14.5
RFFL-203ENST00000413582 TNFSF12-TNFSF13A0A0A6YY99 330 aa8.69□□□□□ -1.02
RFFL-203ENST00000413582 OR6C76A6NM76 312 aa8.69□□□□□ -1.02
RFFL-203ENST00000413582 A8MXE2 369 aa8.69□□□□□ -1.02
RFFL-203ENST00000413582 TP53I11O14683 189 aa8.69□□□□□ -1.02
RFFL-203ENST00000413582 PRKRAO75569 313 aaKnown RBP8.69□□□□□ -1.02
RFFL-203ENST00000413582 TNFSF13O75888 250 aa8.69□□□□□ -1.02
RFFL-203ENST00000413582 ACTL6AO96019 429 aa8.69□□□□□ -1.02
RFFL-203ENST00000413582 C8BP07358 591 aa8.69□□□□□ -1.02
RFFL-203ENST00000413582 NID1P14543 1247 aa8.69□□□□□ -1.02
RFFL-203ENST00000413582 CPN1P15169 458 aa8.69□□□□□ -1.02
RFFL-203ENST00000413582 ALOX15P16050 662 aaPredicted RBP8.69□□□□□ -1.02
RFFL-203ENST00000413582 CRYGSP22914 178 aa8.69□□□□□ -1.02
RFFL-203ENST00000413582 LOXP28300 417 aaPredicted RBP8.69□□□□□ -1.02
RFFL-203ENST00000413582 PTPN6P29350 595 aa8.69□□□□□ -1.02
RFFL-203ENST00000413582 SSR2P43308 183 aa8.69□□□□□ -1.02
RFFL-203ENST00000413582 DOC2AQ14183 400 aa8.69□□□□□ -1.02
RFFL-203ENST00000413582 FBXO48Q5FWF7 155 aa8.69□□□□□ -1.02
RFFL-203ENST00000413582 TIGD3Q6B0B8 471 aa8.69□□□□□ -1.02
RFFL-203ENST00000413582 FRA10AC1Q70Z53 315 aa8.69□□□□□ -1.02
RFFL-203ENST00000413582 CCDC91Q7Z6B0 441 aa8.69□□□□□ -1.02
RFFL-203ENST00000413582 YRDCQ86U90 279 aaKnown RBP8.69□□□□□ -1.02
RFFL-203ENST00000413582 PACS2Q86VP3 889 aa8.69□□□□□ -1.02
RFFL-203ENST00000413582 ST13P4Q8IZP2 240 aaPredicted RBP8.69□□□□□ -1.02
RFFL-203ENST00000413582 TAGAPQ8N103 731 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms