RNA–Protein interactions for RNA: ENST00000413364.6

LITAF-203, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 2 BASIC

Gene LITAF, Length 2,292 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-203ENST00000413364 PCDHGB1Q9Y5G3 927 aa12.32□□□□□ -0.44
LITAF-203ENST00000413364 NUP214P35658 2090 aaPredicted RBP12.32□□□□□ -0.44
LITAF-203ENST00000413364 MYO9BQ13459 2157 aa12.32□□□□□ -0.44
LITAF-203ENST00000413364 DOCK9Q9BZ29 2069 aa12.31□□□□□ -0.44
LITAF-203ENST00000413364 CEP290O15078 2479 aa12.31□□□□□ -0.44
LITAF-203ENST00000413364 C5orf42Q9H799 3197 aa12.31□□□□□ -0.44
LITAF-203ENST00000413364 FEZF1A0PJY2 475 aa12.31□□□□□ -0.44
LITAF-203ENST00000413364 GMDSO60547 372 aa12.31□□□□□ -0.44
LITAF-203ENST00000413364 FABP3P05413 133 aa12.31□□□□□ -0.44
LITAF-203ENST00000413364 ELK4P28324 431 aa12.31□□□□□ -0.44
LITAF-203ENST00000413364 BSGP35613 385 aa12.31□□□□□ -0.44
LITAF-203ENST00000413364 FLI1Q01543 452 aaPredicted RBP12.31□□□□□ -0.44
LITAF-203ENST00000413364 ELOAQ14241 798 aaKnown RBP12.31□□□□□ -0.44
LITAF-203ENST00000413364 CLCA4Q14CN2 919 aa12.31□□□□□ -0.44
LITAF-203ENST00000413364 ZNF852Q6ZMS4 543 aa12.31□□□□□ -0.44
LITAF-203ENST00000413364 THAP5Q7Z6K1 395 aa12.31□□□□□ -0.44
LITAF-203ENST00000413364 VTCN1Q7Z7D3 282 aa12.31□□□□□ -0.44
LITAF-203ENST00000413364 GPALPP1Q8IXQ4 340 aa12.31□□□□□ -0.44
LITAF-203ENST00000413364 CCDC36Q8IYA8 594 aa12.31□□□□□ -0.44
LITAF-203ENST00000413364 FAM83FQ8NEG4 500 aaPredicted RBP12.31□□□□□ -0.44
LITAF-203ENST00000413364 OR4M2Q8NGB6 313 aa12.31□□□□□ -0.44
LITAF-203ENST00000413364 OR2L8Q8NGY9 312 aa12.31□□□□□ -0.44
LITAF-203ENST00000413364 SCARF2Q96GP6 870 aaPredicted RBP12.31□□□□□ -0.44
LITAF-203ENST00000413364 ZNF416Q9BWM5 594 aa12.31□□□□□ -0.44
LITAF-203ENST00000413364 MVB12BQ9H7P6 319 aa12.31□□□□□ -0.44
LITAF-203ENST00000413364 FZD3Q9NPG1 666 aa12.31□□□□□ -0.44
LITAF-203ENST00000413364 GPATCH2Q9NW75 528 aa12.31□□□□□ -0.44
LITAF-203ENST00000413364 FAM118AQ9NWS6 357 aa12.31□□□□□ -0.44
LITAF-203ENST00000413364 CLDND1Q9NY35 253 aa12.31□□□□□ -0.44
LITAF-203ENST00000413364 A0A1W2PRB8 838 aa12.31□□□□□ -0.44
LITAF-203ENST00000413364 A8MUA0 341 aa12.31□□□□□ -0.44
LITAF-203ENST00000413364 A8MV72 311 aaPredicted RBP12.31□□□□□ -0.44
LITAF-203ENST00000413364 SLC31A1O15431 190 aa12.31□□□□□ -0.44
LITAF-203ENST00000413364 RGS5O15539 181 aa12.31□□□□□ -0.44
LITAF-203ENST00000413364 NOBOXO60393 691 aa12.31□□□□□ -0.44
LITAF-203ENST00000413364 TNFRSF21O75509 655 aa12.31□□□□□ -0.44
LITAF-203ENST00000413364 OR2B3O76000 313 aa12.31□□□□□ -0.44
LITAF-203ENST00000413364 CRATP43155 626 aa12.31□□□□□ -0.44
LITAF-203ENST00000413364 GZMKP49863 264 aa12.31□□□□□ -0.44
LITAF-203ENST00000413364 GP2P55259 537 aaKnown RBP12.31□□□□□ -0.44
LITAF-203ENST00000413364 PPP2CBP62714 309 aa12.31□□□□□ -0.44
LITAF-203ENST00000413364 PPP2CAP67775 309 aa12.31□□□□□ -0.44
LITAF-203ENST00000413364 CSNK1G2P78368 415 aa12.31□□□□□ -0.44
LITAF-203ENST00000413364 IL1RL1Q01638 556 aa12.31□□□□□ -0.44
LITAF-203ENST00000413364 PRDX1Q06830 199 aaKnown RBP12.31□□□□□ -0.44
LITAF-203ENST00000413364 PPP1R8Q12972 351 aaKnown RBP12.31□□□□□ -0.44
LITAF-203ENST00000413364 TEAD4Q15561 434 aa12.31□□□□□ -0.44
LITAF-203ENST00000413364 C4orf46Q504U0 113 aa12.31□□□□□ -0.44
LITAF-203ENST00000413364 COX20Q5RI15 118 aa12.31□□□□□ -0.44
LITAF-203ENST00000413364 GCNT6Q5T4J0 391 aa12.31□□□□□ -0.44
LITAF-203ENST00000413364 ANKRD34AQ69YU3 496 aa12.31□□□□□ -0.44
LITAF-203ENST00000413364 ADGRF3Q8IZF5 1079 aa12.31□□□□□ -0.44
LITAF-203ENST00000413364 MMP21Q8N119 569 aa12.31□□□□□ -0.44
LITAF-203ENST00000413364 OR4M1Q8NGD0 313 aa12.31□□□□□ -0.44
LITAF-203ENST00000413364 AKAP1Q92667 903 aaKnown RBP eCLIP12.31□□□□□ -0.442e-6■■■□□ 16.5
LITAF-203ENST00000413364 MAL2Q969L2 176 aa12.31□□□□□ -0.44
LITAF-203ENST00000413364 ZHX1-C8orf76Q96EF9 292 aa12.31□□□□□ -0.44
LITAF-203ENST00000413364 QRFPRQ96P65 431 aa12.31□□□□□ -0.44
LITAF-203ENST00000413364 C12orf57Q99622 126 aa12.31□□□□□ -0.44
LITAF-203ENST00000413364 CCDC32Q9BV29 185 aa12.31□□□□□ -0.44
LITAF-203ENST00000413364 NUAK2Q9H093 628 aa12.31□□□□□ -0.44
LITAF-203ENST00000413364 GABARAPL1Q9H0R8 117 aa12.31□□□□□ -0.44
LITAF-203ENST00000413364 XKR8Q9H6D3 395 aa12.31□□□□□ -0.44
LITAF-203ENST00000413364 RANGRFQ9HD47 186 aaPredicted RBP12.31□□□□□ -0.44
LITAF-203ENST00000413364 MIEF1Q9NQG6 463 aa12.31□□□□□ -0.44
LITAF-203ENST00000413364 PCDHB16Q9NRJ7 776 aa12.31□□□□□ -0.44
LITAF-203ENST00000413364 SDHAF3Q9NRP4 125 aa12.31□□□□□ -0.44
LITAF-203ENST00000413364 WDR70Q9NW82 654 aa12.31□□□□□ -0.44
LITAF-203ENST00000413364 TAAR2Q9P1P5 351 aa12.31□□□□□ -0.44
LITAF-203ENST00000413364 KLHL21Q9UJP4 597 aa12.31□□□□□ -0.44
LITAF-203ENST00000413364 ICKQ9UPZ9 632 aa12.31□□□□□ -0.44
LITAF-203ENST00000413364 NAALAD2Q9Y3Q0 740 aa12.31□□□□□ -0.44
LITAF-203ENST00000413364 HSPE1-MOB4S4R3N1 261 aa12.31□□□□□ -0.44
LITAF-203ENST00000413364 CDH23Q9H251 3354 aa12.31□□□□□ -0.44
LITAF-203ENST00000413364 MEIOCA2RUB1 952 aa12.3□□□□□ -0.44
LITAF-203ENST00000413364 LOC110117498-PIK3R3F6TDL0 507 aa12.3□□□□□ -0.44
LITAF-203ENST00000413364 LINC01387J3KSC0 135 aa12.3□□□□□ -0.44
LITAF-203ENST00000413364 GATCO43716 136 aaKnown RBP12.3□□□□□ -0.44
LITAF-203ENST00000413364 OR1F1O43749 312 aa12.3□□□□□ -0.44
LITAF-203ENST00000413364 HS6ST1O60243 411 aa12.3□□□□□ -0.44
LITAF-203ENST00000413364 TBX19O60806 448 aa12.3□□□□□ -0.44
LITAF-203ENST00000413364 TRIM3O75382 744 aaPredicted RBP12.3□□□□□ -0.44
LITAF-203ENST00000413364 ETFAP13804 333 aa12.3□□□□□ -0.44
LITAF-203ENST00000413364 PRKACGP22612 351 aa12.3□□□□□ -0.44
LITAF-203ENST00000413364 SHMT2P34897 504 aa12.3□□□□□ -0.44
LITAF-203ENST00000413364 CRYBA2P53672 197 aa12.3□□□□□ -0.44
LITAF-203ENST00000413364 VLDLRP98155 873 aa12.3□□□□□ -0.44
LITAF-203ENST00000413364 RGS1Q08116 209 aa12.3□□□□□ -0.44
LITAF-203ENST00000413364 FADDQ13158 208 aa12.3□□□□□ -0.44
LITAF-203ENST00000413364 KRT33BQ14525 404 aa12.3□□□□□ -0.44
LITAF-203ENST00000413364 RFX4Q33E94 735 aa12.3□□□□□ -0.44
LITAF-203ENST00000413364 UAP1L1Q3KQV9 507 aa12.3□□□□□ -0.44
LITAF-203ENST00000413364 COLEC12Q5KU26 742 aa12.3□□□□□ -0.44
LITAF-203ENST00000413364 NXNL2Q5VZ03 156 aa12.3□□□□□ -0.44
LITAF-203ENST00000413364 TMEM81Q6P7N7 255 aa12.3□□□□□ -0.44
LITAF-203ENST00000413364 ANGPTL8Q6UXH0 198 aa12.3□□□□□ -0.44
LITAF-203ENST00000413364 GPAT4Q86UL3 456 aa12.3□□□□□ -0.44
LITAF-203ENST00000413364 ZBTB44Q8NCP5 570 aa12.3□□□□□ -0.44
LITAF-203ENST00000413364 ZNF555Q8NEP9 628 aa12.3□□□□□ -0.44
LITAF-203ENST00000413364 OR2A1Q8NGT9 310 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms