RNA–Protein interactions for RNA: ENST00000413141.5

VPS41-204, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-204ENST00000413141 SAMD4AQ9UPU9 718 aaKnown RBP6.22□□□□□ -1.41
VPS41-204ENST00000413141 ANGPT4Q9Y264 503 aa6.22□□□□□ -1.41
VPS41-204ENST00000413141 LOXL2Q9Y4K0 774 aa6.22□□□□□ -1.41
VPS41-204ENST00000413141 V9GYQ6 96 aa6.22□□□□□ -1.41
VPS41-204ENST00000413141 ASCC3Q8N3C0 2202 aaKnown RBP6.22□□□□□ -1.41
VPS41-204ENST00000413141 SPEGQ15772 3267 aa6.22□□□□□ -1.41
VPS41-204ENST00000413141 TCRBV16S1A1N1A0A5B0 115 aa6.21□□□□□ -1.42
VPS41-204ENST00000413141 SYNDIG1LA6NDD5 238 aa6.21□□□□□ -1.42
VPS41-204ENST00000413141 PROB1E7EW31 1015 aa6.21□□□□□ -1.42
VPS41-204ENST00000413141 TMX2-CTNND1H3BSU7 103 aa6.21□□□□□ -1.42
VPS41-204ENST00000413141 COQ9O75208 318 aa6.21□□□□□ -1.42
VPS41-204ENST00000413141 CSO75390 466 aaKnown RBP6.21□□□□□ -1.42
VPS41-204ENST00000413141 GCM2O75603 506 aaPredicted RBP6.21□□□□□ -1.42
VPS41-204ENST00000413141 DKK1O94907 266 aa6.21□□□□□ -1.42
VPS41-204ENST00000413141 CBX7O95931 251 aa6.21□□□□□ -1.42
VPS41-204ENST00000413141 ONECUT2O95948 504 aa6.21□□□□□ -1.42
VPS41-204ENST00000413141 TFPTP0C1Z6 253 aa6.21□□□□□ -1.42
VPS41-204ENST00000413141 OR12D1P0DN82 309 aa6.21□□□□□ -1.42
VPS41-204ENST00000413141 UMPSP11172 480 aa6.21□□□□□ -1.42
VPS41-204ENST00000413141 ZNF28P17035 718 aa6.21□□□□□ -1.42
VPS41-204ENST00000413141 ITIH1P19827 911 aa6.21□□□□□ -1.42
VPS41-204ENST00000413141 MATN1P21941 496 aa6.21□□□□□ -1.42
VPS41-204ENST00000413141 AQP1P29972 269 aa6.21□□□□□ -1.42
VPS41-204ENST00000413141 KDELR2P33947 212 aa6.21□□□□□ -1.42
VPS41-204ENST00000413141 GALNSP34059 522 aa6.21□□□□□ -1.42
VPS41-204ENST00000413141 MAN2A2P49641 1150 aa6.21□□□□□ -1.42
VPS41-204ENST00000413141 LIMK1P53667 647 aa6.21□□□□□ -1.42
VPS41-204ENST00000413141 PCBP3P57721 371 aaKnown RBP6.21□□□□□ -1.42
VPS41-204ENST00000413141 SESN3P58005 492 aa6.21□□□□□ -1.42
VPS41-204ENST00000413141 RAB15P59190 212 aa6.21□□□□□ -1.42
VPS41-204ENST00000413141 DCDP81605 110 aaKnown RBP6.21□□□□□ -1.42
VPS41-204ENST00000413141 CDK6Q00534 326 aa6.21□□□□□ -1.42
VPS41-204ENST00000413141 SLC34A1Q06495 639 aa6.21□□□□□ -1.42
VPS41-204ENST00000413141 FUT5Q11128 374 aa6.21□□□□□ -1.42
VPS41-204ENST00000413141 MAP4K2Q12851 820 aa6.21□□□□□ -1.42
VPS41-204ENST00000413141 DUSP8Q13202 625 aa6.21□□□□□ -1.42
VPS41-204ENST00000413141 BIKQ13323 160 aa6.21□□□□□ -1.42
VPS41-204ENST00000413141 MYBPC3Q14896 1274 aa6.21□□□□□ -1.42
VPS41-204ENST00000413141 EXOSC7Q15024 291 aaKnown RBP6.21□□□□□ -1.42
VPS41-204ENST00000413141 TRIP6Q15654 476 aaKnown RBP6.21□□□□□ -1.42
VPS41-204ENST00000413141 MAPK11Q15759 364 aa6.21□□□□□ -1.42
VPS41-204ENST00000413141 NKG7Q16617 165 aa6.21□□□□□ -1.42
VPS41-204ENST00000413141 ISXQ2M1V0 245 aa6.21□□□□□ -1.42
VPS41-204ENST00000413141 VWA2Q5GFL6 755 aa6.21□□□□□ -1.42
VPS41-204ENST00000413141 RPS26P11Q5JNZ5 115 aaPredicted RBP6.21□□□□□ -1.42
VPS41-204ENST00000413141 TBCELQ5QJ74 424 aa6.21□□□□□ -1.42
VPS41-204ENST00000413141 EXOSC6Q5RKV6 272 aaKnown RBP6.21□□□□□ -1.42
VPS41-204ENST00000413141 INTS11Q5TA45 600 aaKnown RBP6.21□□□□□ -1.42
VPS41-204ENST00000413141 MFSD4BQ5TF39 518 aa6.21□□□□□ -1.42
VPS41-204ENST00000413141 CDC73Q6P1J9 531 aa6.21□□□□□ -1.42
VPS41-204ENST00000413141 ENPP6Q6UWR7 440 aa6.21□□□□□ -1.42
VPS41-204ENST00000413141 CCDC80Q76M96 950 aa6.21□□□□□ -1.42
VPS41-204ENST00000413141 GALNT10Q86SR1 603 aa6.21□□□□□ -1.42
VPS41-204ENST00000413141 EID3Q8N140 333 aa6.21□□□□□ -1.42
VPS41-204ENST00000413141 PQLC1Q8N2U9 271 aa6.21□□□□□ -1.42
VPS41-204ENST00000413141 PAPD5Q8NDF8 572 aaKnown RBP6.21□□□□□ -1.42
VPS41-204ENST00000413141 DEFB124Q8NES8 71 aa6.21□□□□□ -1.42
VPS41-204ENST00000413141 DOK4Q8TEW6 326 aa6.21□□□□□ -1.42
VPS41-204ENST00000413141 SLC38A5Q8WUX1 472 aa6.21□□□□□ -1.42
VPS41-204ENST00000413141 RAB8BQ92930 207 aa6.21□□□□□ -1.42
VPS41-204ENST00000413141 RIT1Q92963 219 aa6.21□□□□□ -1.42
VPS41-204ENST00000413141 POP5Q969H6 163 aaKnown RBP6.21□□□□□ -1.42
VPS41-204ENST00000413141 FKBP10Q96AY3 582 aa6.21□□□□□ -1.42
VPS41-204ENST00000413141 OTUB1Q96FW1 271 aaPredicted RBP6.21□□□□□ -1.42
VPS41-204ENST00000413141 C16orf58Q96GQ5 468 aa6.21□□□□□ -1.42
VPS41-204ENST00000413141 TMEM19Q96HH6 336 aa6.21□□□□□ -1.42
VPS41-204ENST00000413141 RNF145Q96MT1 663 aa6.21□□□□□ -1.42
VPS41-204ENST00000413141 LRFN5Q96NI6 719 aa6.21□□□□□ -1.42
VPS41-204ENST00000413141 PTCHD1Q96NR3 888 aa6.21□□□□□ -1.42
VPS41-204ENST00000413141 OR7D2Q96RA2 312 aa6.21□□□□□ -1.42
VPS41-204ENST00000413141 YIPF4Q9BSR8 244 aa6.21□□□□□ -1.42
VPS41-204ENST00000413141 ACTRT3Q9BYD9 372 aa6.21□□□□□ -1.42
VPS41-204ENST00000413141 ULBP3Q9BZM4 244 aa6.21□□□□□ -1.42
VPS41-204ENST00000413141 STRADBQ9C0K7 418 aa6.21□□□□□ -1.42
VPS41-204ENST00000413141 TGIF2Q9GZN2 237 aa6.21□□□□□ -1.42
VPS41-204ENST00000413141 VN1R1Q9GZP7 353 aa6.21□□□□□ -1.42
VPS41-204ENST00000413141 ADAP2Q9NPF8 381 aa6.21□□□□□ -1.42
VPS41-204ENST00000413141 CCM2LQ9NUG4 571 aaPredicted RBP6.21□□□□□ -1.42
VPS41-204ENST00000413141 ARMC1Q9NVT9 282 aa6.21□□□□□ -1.42
VPS41-204ENST00000413141 SLC39A1Q9NY26 324 aa6.21□□□□□ -1.42
VPS41-204ENST00000413141 STOML1Q9UBI4 398 aa6.21□□□□□ -1.42
VPS41-204ENST00000413141 ZNF639Q9UID6 485 aa6.21□□□□□ -1.42
VPS41-204ENST00000413141 RIMS3Q9UJD0 308 aa6.21□□□□□ -1.42
VPS41-204ENST00000413141 MKL2Q9ULH7 1088 aa6.21□□□□□ -1.42
VPS41-204ENST00000413141 AURKCQ9UQB9 309 aa6.21□□□□□ -1.42
VPS41-204ENST00000413141 AP4S1Q9Y587 144 aa6.21□□□□□ -1.42
VPS41-204ENST00000413141 CUL9Q8IWT3 2517 aa6.21□□□□□ -1.42
VPS41-204ENST00000413141 LOC105378220A0A1B0GUY1 285 aaPredicted RBP6.2□□□□□ -1.42
VPS41-204ENST00000413141 PRAMEF27A3QJZ7 478 aa6.2□□□□□ -1.42
VPS41-204ENST00000413141 PMS2P1A4D2B8 440 aa6.2□□□□□ -1.42
VPS41-204ENST00000413141 TMEM247A6NEH6 219 aa6.2□□□□□ -1.42
VPS41-204ENST00000413141 VSTM2BA6NLU5 285 aa6.2□□□□□ -1.42
VPS41-204ENST00000413141 C17orf105B2RV13 164 aa6.2□□□□□ -1.42
VPS41-204ENST00000413141 C5orf58C9J3I9 102 aa6.2□□□□□ -1.42
VPS41-204ENST00000413141 HRKO00198 91 aa6.2□□□□□ -1.42
VPS41-204ENST00000413141 MEN1O00255 615 aa6.2□□□□□ -1.42
VPS41-204ENST00000413141 SLC28A2O43868 658 aa6.2□□□□□ -1.42
VPS41-204ENST00000413141 PRAMEF2O60811 474 aa6.2□□□□□ -1.42
VPS41-204ENST00000413141 NME6O75414 186 aaPredicted RBP6.2□□□□□ -1.42
VPS41-204ENST00000413141 TIPRLO75663 272 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms