RNA–Protein interactions for RNA: ENST00000410011.5

LIMS2-208, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMS2, Length 2,335 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-208ENST00000410011 SFXN5Q8TD22 340 aa15.74■□□□□ 0.11
LIMS2-208ENST00000410011 XAGE5Q8WWM1 108 aa15.74■□□□□ 0.11
LIMS2-208ENST00000410011 PHOX2BQ99453 314 aa15.74■□□□□ 0.11
LIMS2-208ENST00000410011 ABCB9Q9NP78 766 aa15.74■□□□□ 0.11
LIMS2-208ENST00000410011 FBXW2Q9UKT8 454 aa15.74■□□□□ 0.11
LIMS2-208ENST00000410011 SNX7Q9UNH6 387 aa15.74■□□□□ 0.11
LIMS2-208ENST00000410011 EXOSC1Q9Y3B2 195 aaKnown RBP15.74■□□□□ 0.11
LIMS2-208ENST00000410011 NINQ8N4C6 2090 aa15.74■□□□□ 0.11
LIMS2-208ENST00000410011 FABP12A6NFH5 140 aa15.74■□□□□ 0.11
LIMS2-208ENST00000410011 CENPBD1B2RD01 187 aa15.74■□□□□ 0.11
LIMS2-208ENST00000410011 SYT5O00445 386 aa15.74■□□□□ 0.11
LIMS2-208ENST00000410011 EPPINO95925 133 aa15.74■□□□□ 0.11
LIMS2-208ENST00000410011 IFNGR2P38484 337 aa15.74■□□□□ 0.11
LIMS2-208ENST00000410011 MAN2A2P49641 1150 aa15.74■□□□□ 0.11
LIMS2-208ENST00000410011 MNX1P50219 401 aaPredicted RBP15.74■□□□□ 0.11
LIMS2-208ENST00000410011 ARFIP1P53367 373 aa15.74■□□□□ 0.11
LIMS2-208ENST00000410011 DEFB115Q30KQ5 88 aa15.74■□□□□ 0.11
LIMS2-208ENST00000410011 TMEM35AQ53FP2 167 aa15.74■□□□□ 0.11
LIMS2-208ENST00000410011 DDI2Q5TDH0 399 aa15.74■□□□□ 0.11
LIMS2-208ENST00000410011 GJD3Q8N144 294 aa15.74■□□□□ 0.11
LIMS2-208ENST00000410011 IQCF1Q8N6M8 205 aa15.74■□□□□ 0.11
LIMS2-208ENST00000410011 PLA2G15Q8NCC3 412 aa15.74■□□□□ 0.11
LIMS2-208ENST00000410011 TTLQ8NG68 377 aa15.74■□□□□ 0.11
LIMS2-208ENST00000410011 OR6T1Q8NGN1 323 aa15.74■□□□□ 0.11
LIMS2-208ENST00000410011 COQ7Q99807 217 aa15.74■□□□□ 0.11
LIMS2-208ENST00000410011 FAIM2Q9BWQ8 316 aa15.74■□□□□ 0.11
LIMS2-208ENST00000410011 PINK1Q9BXM7 581 aa15.74■□□□□ 0.11
LIMS2-208ENST00000410011 SLC35C2Q9NQQ7 365 aa15.74■□□□□ 0.11
LIMS2-208ENST00000410011 C5AR2Q9P296 337 aa15.74■□□□□ 0.11
LIMS2-208ENST00000410011 ZNF232Q9UNY5 417 aa15.74■□□□□ 0.11
LIMS2-208ENST00000410011 ZBTB32Q9Y2Y4 487 aaPredicted RBP15.74■□□□□ 0.11
LIMS2-208ENST00000410011 PCYT1BQ9Y5K3 369 aaPredicted RBP15.74■□□□□ 0.11
LIMS2-208ENST00000410011 PLXND1Q9Y4D7 1925 aa15.74■□□□□ 0.11
LIMS2-208ENST00000410011 A0A1W2PQL4 384 aaPredicted RBP15.73■□□□□ 0.11
LIMS2-208ENST00000410011 CENPXA8MT69 81 aa15.73■□□□□ 0.11
LIMS2-208ENST00000410011 H7BY64 318 aa15.73■□□□□ 0.11
LIMS2-208ENST00000410011 M0R3H8 397 aa15.73■□□□□ 0.11
LIMS2-208ENST00000410011 CYP7B1O75881 506 aa15.73■□□□□ 0.11
LIMS2-208ENST00000410011 ADH1CP00326 375 aa15.73■□□□□ 0.11
LIMS2-208ENST00000410011 TSPAN19P0C672 248 aa15.73■□□□□ 0.11
LIMS2-208ENST00000410011 ERVFC1P60507 584 aa15.73■□□□□ 0.11
LIMS2-208ENST00000410011 SNAPC1Q16533 368 aa15.73■□□□□ 0.11
LIMS2-208ENST00000410011 MINDY4Q4G0A6 757 aa15.73■□□□□ 0.11
LIMS2-208ENST00000410011 ZNF628Q5EBL2 1059 aa15.73■□□□□ 0.11
LIMS2-208ENST00000410011 ATAT1Q5SQI0 421 aa15.73■□□□□ 0.11
LIMS2-208ENST00000410011 SLC35F1Q5T1Q4 408 aa15.73■□□□□ 0.11
LIMS2-208ENST00000410011 KIAA1161Q6NSJ0 714 aa15.73■□□□□ 0.11
LIMS2-208ENST00000410011 FAM131AQ6UXB0 335 aa15.73■□□□□ 0.11
LIMS2-208ENST00000410011 SLC36A4Q6YBV0 504 aa15.73■□□□□ 0.11
LIMS2-208ENST00000410011 QSOX2Q6ZRP7 698 aa15.73■□□□□ 0.11
LIMS2-208ENST00000410011 LRRTM4Q86VH4 590 aa15.73■□□□□ 0.11
LIMS2-208ENST00000410011 ETFBKMTQ8IXQ9 262 aa15.73■□□□□ 0.11
LIMS2-208ENST00000410011 MOAP1Q96BY2 351 aa15.73■□□□□ 0.11
LIMS2-208ENST00000410011 PRAP1Q96NZ9 151 aa15.73■□□□□ 0.11
LIMS2-208ENST00000410011 GPA33Q99795 319 aa15.73■□□□□ 0.11
LIMS2-208ENST00000410011 SLC23A2Q9UGH3 650 aa15.73■□□□□ 0.11
LIMS2-208ENST00000410011 GSTK1Q9Y2Q3 226 aa15.73■□□□□ 0.11
LIMS2-208ENST00000410011 SPIN1Q9Y657 262 aaPredicted RBP15.73■□□□□ 0.11
LIMS2-208ENST00000410011 NOTCH4Q99466 2003 aa15.73■□□□□ 0.11
LIMS2-208ENST00000410011 FEZF1A0PJY2 475 aa15.73■□□□□ 0.11
LIMS2-208ENST00000410011 SLC30A4O14863 429 aa15.73■□□□□ 0.11
LIMS2-208ENST00000410011 ALPPP05187 535 aa15.73■□□□□ 0.11
LIMS2-208ENST00000410011 CSF3P09919 207 aa15.73■□□□□ 0.11
LIMS2-208ENST00000410011 TCEA1P23193 301 aaKnown RBP15.73■□□□□ 0.11
LIMS2-208ENST00000410011 PTBP1P26599 531 aaKnown RBP eCLIP15.73■□□□□ 0.11
LIMS2-208ENST00000410011 GABRA5P31644 462 aa15.73■□□□□ 0.11
LIMS2-208ENST00000410011 CSNK1G2P78368 415 aa15.73■□□□□ 0.11
LIMS2-208ENST00000410011 HNRNPA0Q13151 305 aaKnown RBP15.73■□□□□ 0.11
LIMS2-208ENST00000410011 ZFP69Q49AA0 526 aa15.73■□□□□ 0.11
LIMS2-208ENST00000410011 C1QTNF12Q5T7M4 302 aa15.73■□□□□ 0.11
LIMS2-208ENST00000410011 PPP2R2DQ66LE6 453 aa15.73■□□□□ 0.11
LIMS2-208ENST00000410011 SLC27A4Q6P1M0 643 aa15.73■□□□□ 0.11
LIMS2-208ENST00000410011 METAP1DQ6UB28 335 aaPredicted RBP15.73■□□□□ 0.11
LIMS2-208ENST00000410011 ZNF730Q6ZMV8 503 aa15.73■□□□□ 0.11
LIMS2-208ENST00000410011 IQCHQ86VS3 1027 aa15.73■□□□□ 0.11
LIMS2-208ENST00000410011 C12orf40Q86WS4 652 aa15.73■□□□□ 0.11
LIMS2-208ENST00000410011 ZNF485Q8NCK3 441 aa15.73■□□□□ 0.11
LIMS2-208ENST00000410011 GNPDA2Q8TDQ7 276 aa15.73■□□□□ 0.11
LIMS2-208ENST00000410011 RAB7BQ96AH8 199 aa15.73■□□□□ 0.11
LIMS2-208ENST00000410011 TPK1Q9H3S4 243 aa15.73■□□□□ 0.11
LIMS2-208ENST00000410011 ANKRD19PQ9H560 264 aa15.73■□□□□ 0.11
LIMS2-208ENST00000410011 TIGARQ9NQ88 270 aa15.73■□□□□ 0.11
LIMS2-208ENST00000410011 ZCCHC3Q9NUD5 404 aaKnown RBP15.73■□□□□ 0.11
LIMS2-208ENST00000410011 HIDE1A8MVS5 230 aa15.72■□□□□ 0.11
LIMS2-208ENST00000410011 KDM4EB2RXH2 506 aaPredicted RBP15.72■□□□□ 0.11
LIMS2-208ENST00000410011 MAN2B1O00754 1011 aa15.72■□□□□ 0.11
LIMS2-208ENST00000410011 POLR1CO15160 346 aaPredicted RBP15.72■□□□□ 0.11
LIMS2-208ENST00000410011 HNRNPA1P09651 372 aaKnown RBP eCLIP15.72■□□□□ 0.11
LIMS2-208ENST00000410011 TMEM44Q2T9K0 475 aa15.72■□□□□ 0.11
LIMS2-208ENST00000410011 NDUFAF5Q5TEU4 345 aa15.72■□□□□ 0.11
LIMS2-208ENST00000410011 C22orf42Q6IC83 251 aa15.72■□□□□ 0.11
LIMS2-208ENST00000410011 VWA5B2Q8N398 1253 aa15.72■□□□□ 0.11
LIMS2-208ENST00000410011 Q8N9G6 341 aaPredicted RBP15.72■□□□□ 0.11
LIMS2-208ENST00000410011 TP53I13Q8NBR0 393 aaPredicted RBP15.72■□□□□ 0.11
LIMS2-208ENST00000410011 OR5D16Q8NGK9 328 aa15.72■□□□□ 0.11
LIMS2-208ENST00000410011 TM9SF4Q92544 642 aa15.72■□□□□ 0.11
LIMS2-208ENST00000410011 DIRAS2Q96HU8 199 aa15.72■□□□□ 0.11
LIMS2-208ENST00000410011 SOSTQ9BQB4 213 aa15.72■□□□□ 0.11
LIMS2-208ENST00000410011 ARHGAP9Q9BRR9 750 aa15.72■□□□□ 0.11
LIMS2-208ENST00000410011 DPH7Q9BTV6 452 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms