RNA–Protein interactions for RNA: ENST00000409747.5

CBX3-203, Transcript of chromobox 3, humanhuman

TSL 1 (best) BASIC

Gene CBX3, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-203ENST00000409747 AHRRA9YTQ3 701 aa13.51□□□□□ -0.25
CBX3-203ENST00000409747 ACOX3O15254 700 aa13.51□□□□□ -0.25
CBX3-203ENST00000409747 ERAL1O75616 437 aaKnown RBP13.51□□□□□ -0.25
CBX3-203ENST00000409747 TRAPPC6AO75865 159 aa13.51□□□□□ -0.25
CBX3-203ENST00000409747 KRT6AP02538 564 aa13.51□□□□□ -0.25
CBX3-203ENST00000409747 KRT6BP04259 564 aa13.51□□□□□ -0.25
CBX3-203ENST00000409747 HPNP05981 417 aa13.51□□□□□ -0.25
CBX3-203ENST00000409747 GPX3P22352 226 aa13.51□□□□□ -0.25
CBX3-203ENST00000409747 ADH7P40394 386 aa13.51□□□□□ -0.25
CBX3-203ENST00000409747 CASP3P42574 277 aa13.51□□□□□ -0.25
CBX3-203ENST00000409747 KRT6CP48668 564 aa13.51□□□□□ -0.25
CBX3-203ENST00000409747 CDH13P55290 713 aa13.51□□□□□ -0.25
CBX3-203ENST00000409747 CLCQ05315 142 aa13.51□□□□□ -0.25
CBX3-203ENST00000409747 MAP4K2Q12851 820 aa13.51□□□□□ -0.25
CBX3-203ENST00000409747 CSTF3Q12996 717 aaKnown RBP13.51□□□□□ -0.25
CBX3-203ENST00000409747 DUSP8Q13202 625 aa13.51□□□□□ -0.25
CBX3-203ENST00000409747 PRICKLE4Q2TBC4 344 aa13.51□□□□□ -0.25
CBX3-203ENST00000409747 TEX35Q5T0J7 233 aa13.51□□□□□ -0.25
CBX3-203ENST00000409747 WDR53Q7Z5U6 358 aaPredicted RBP13.51□□□□□ -0.25
CBX3-203ENST00000409747 TMEM200AQ86VY9 491 aa13.51□□□□□ -0.25
CBX3-203ENST00000409747 UHMK1Q8TAS1 419 aaKnown RBP13.51□□□□□ -0.25
CBX3-203ENST00000409747 KLHL29Q96CT2 875 aa13.51□□□□□ -0.25
CBX3-203ENST00000409747 HSPBAP1Q96EW2 488 aa13.51□□□□□ -0.25
CBX3-203ENST00000409747 TMEM41AQ96HV5 264 aa13.51□□□□□ -0.25
CBX3-203ENST00000409747 METTL7AQ9H8H3 244 aa13.51□□□□□ -0.25
CBX3-203ENST00000409747 VPS29Q9UBQ0 182 aa13.51□□□□□ -0.25
CBX3-203ENST00000409747 BCAP29Q9UHQ4 241 aa13.51□□□□□ -0.25
CBX3-203ENST00000409747 C15orf41Q9Y2V0 281 aa13.51□□□□□ -0.25
CBX3-203ENST00000409747 EXPH5Q8NEV8 1989 aa13.51□□□□□ -0.25
CBX3-203ENST00000409747 PPM1BO75688 479 aa13.5□□□□□ -0.25
CBX3-203ENST00000409747 SUPT7LO94864 414 aa13.5□□□□□ -0.25
CBX3-203ENST00000409747 ZWINTO95229 277 aa13.5□□□□□ -0.25
CBX3-203ENST00000409747 SBK3P0C264 359 aa13.5□□□□□ -0.25
CBX3-203ENST00000409747 CDK9P50750 372 aaKnown RBP13.5□□□□□ -0.25
CBX3-203ENST00000409747 DCAF7P61962 342 aa13.5□□□□□ -0.25
CBX3-203ENST00000409747 TMEM81Q6P7N7 255 aa13.5□□□□□ -0.25
CBX3-203ENST00000409747 TIFABQ6ZNK6 161 aa13.5□□□□□ -0.25
CBX3-203ENST00000409747 RPS27LQ71UM5 84 aaKnown RBP13.5□□□□□ -0.25
CBX3-203ENST00000409747 TRMT10CQ7L0Y3 403 aaKnown RBP13.5□□□□□ -0.25
CBX3-203ENST00000409747 LACC1Q8IV20 430 aa13.5□□□□□ -0.25
CBX3-203ENST00000409747 ZNF382Q96SR6 550 aa13.5□□□□□ -0.25
CBX3-203ENST00000409747 NXF5Q9H1B4 397 aaKnown RBP13.5□□□□□ -0.25
CBX3-203ENST00000409747 UBQLN3Q9H347 655 aa13.5□□□□□ -0.25
CBX3-203ENST00000409747 MAT2BQ9NZL9 334 aa13.5□□□□□ -0.25
CBX3-203ENST00000409747 PRODH2Q9UF12 536 aa13.5□□□□□ -0.25
CBX3-203ENST00000409747 ARHGAP21Q5T5U3 1957 aa13.5□□□□□ -0.25
CBX3-203ENST00000409747 CCDC168Q8NDH2 2452 aa13.5□□□□□ -0.25
CBX3-203ENST00000409747 A0A1B0GTL3 188 aa13.5□□□□□ -0.25
CBX3-203ENST00000409747 CCDC151A5D8V7 595 aa13.5□□□□□ -0.25
CBX3-203ENST00000409747 KIF2AO00139 706 aaPredicted RBP13.5□□□□□ -0.25
CBX3-203ENST00000409747 DVL2O14641 736 aa13.5□□□□□ -0.25
CBX3-203ENST00000409747 OR4F21O95013 312 aa13.5□□□□□ -0.25
CBX3-203ENST00000409747 ABCB1P08183 1280 aaPredicted RBP13.5□□□□□ -0.25
CBX3-203ENST00000409747 TSPAN8P19075 237 aa13.5□□□□□ -0.25
CBX3-203ENST00000409747 S1PR1P21453 382 aa13.5□□□□□ -0.25
CBX3-203ENST00000409747 GCKP35557 465 aa13.5□□□□□ -0.25
CBX3-203ENST00000409747 HSD17B3P37058 310 aa13.5□□□□□ -0.25
CBX3-203ENST00000409747 FEN1P39748 380 aaKnown RBP13.5□□□□□ -0.25
CBX3-203ENST00000409747 ALDH9A1P49189 494 aa13.5□□□□□ -0.25
CBX3-203ENST00000409747 CRYZQ08257 329 aaKnown RBP13.5□□□□□ -0.25
CBX3-203ENST00000409747 PLCXD2Q0VAA5 305 aa13.5□□□□□ -0.25
CBX3-203ENST00000409747 SNTA1Q13424 505 aa13.5□□□□□ -0.25
CBX3-203ENST00000409747 TOMM20Q15388 145 aa13.5□□□□□ -0.25
CBX3-203ENST00000409747 ACSF3Q4G176 576 aaPredicted RBP13.5□□□□□ -0.25
CBX3-203ENST00000409747 BICRALQ6AI39 1079 aa13.5□□□□□ -0.25
CBX3-203ENST00000409747 SLC22A9Q8IVM8 553 aa13.5□□□□□ -0.25
CBX3-203ENST00000409747 PRR22Q8IZ63 422 aa13.5□□□□□ -0.25
CBX3-203ENST00000409747 SAMD14Q8IZD0 417 aaPredicted RBP13.5□□□□□ -0.25
CBX3-203ENST00000409747 TMEM151AQ8N4L1 468 aa13.5□□□□□ -0.25
CBX3-203ENST00000409747 C1orf52Q8N6N3 182 aaKnown RBP13.5□□□□□ -0.25
CBX3-203ENST00000409747 GBP7Q8N8V2 638 aaPredicted RBP13.5□□□□□ -0.25
CBX3-203ENST00000409747 TM4SF18Q96CE8 201 aa13.5□□□□□ -0.25
CBX3-203ENST00000409747 LCORQ96JN0 433 aaPredicted RBP13.5□□□□□ -0.25
CBX3-203ENST00000409747 PRDM14Q9GZV8 571 aa13.5□□□□□ -0.25
CBX3-203ENST00000409747 ZNF639Q9UID6 485 aa13.5□□□□□ -0.25
CBX3-203ENST00000409747 MCM8Q9UJA3 840 aa13.5□□□□□ -0.25
CBX3-203ENST00000409747 NFU1Q9UMS0 254 aa13.5□□□□□ -0.25
CBX3-203ENST00000409747 TEP1Q99973 2627 aaKnown RBP13.49□□□□□ -0.25
CBX3-203ENST00000409747 MANBAO00462 879 aa13.49□□□□□ -0.25
CBX3-203ENST00000409747 PPP6CO00743 305 aa13.49□□□□□ -0.25
CBX3-203ENST00000409747 BCAS2O75934 225 aaPredicted RBP13.49□□□□□ -0.25
CBX3-203ENST00000409747 ESRRBO95718 433 aa13.49□□□□□ -0.25
CBX3-203ENST00000409747 EPPINO95925 133 aa13.49□□□□□ -0.25
CBX3-203ENST00000409747 RHOXF2BP0C7M4 288 aa13.49□□□□□ -0.25
CBX3-203ENST00000409747 HMOX2P30519 316 aa13.49□□□□□ -0.25
CBX3-203ENST00000409747 PSPHP78330 225 aa13.49□□□□□ -0.25
CBX3-203ENST00000409747 NHSL2Q5HYW2 709 aa13.49□□□□□ -0.25
CBX3-203ENST00000409747 ZNF678Q5SXM1 525 aa13.49□□□□□ -0.25
CBX3-203ENST00000409747 TIGD3Q6B0B8 471 aa13.49□□□□□ -0.25
CBX3-203ENST00000409747 SLC30A6Q6NXT4 461 aa13.49□□□□□ -0.25
CBX3-203ENST00000409747 SPNS3Q6ZMD2 512 aa13.49□□□□□ -0.25
CBX3-203ENST00000409747 GPRIN3Q6ZVF9 776 aa13.49□□□□□ -0.25
CBX3-203ENST00000409747 NUP54Q7Z3B4 507 aa13.49□□□□□ -0.25
CBX3-203ENST00000409747 LIX1LQ8IVB5 337 aa13.49□□□□□ -0.25
CBX3-203ENST00000409747 CDYL2Q8N8U2 506 aa13.49□□□□□ -0.25
CBX3-203ENST00000409747 OR1J4Q8NGS1 313 aa13.49□□□□□ -0.25
CBX3-203ENST00000409747 CTHRC1Q96CG8 243 aa13.49□□□□□ -0.25
CBX3-203ENST00000409747 ERP27Q96DN0 273 aa13.49□□□□□ -0.25
CBX3-203ENST00000409747 DTNBP1Q96EV8 351 aa13.49□□□□□ -0.25
CBX3-203ENST00000409747 GNRHR2Q96P88 292 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms