RNA–Protein interactions for RNA: ENST00000409254.1

LIMS2-203, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 3 BASIC

Gene LIMS2, Length 867 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-203ENST00000409254 SOX18P35713 384 aa12.13□□□□□ -0.47
LIMS2-203ENST00000409254 MC3RP41968 323 aa12.13□□□□□ -0.47
LIMS2-203ENST00000409254 CCT3P49368 545 aaKnown RBP12.13□□□□□ -0.47
LIMS2-203ENST00000409254 RASSF2P50749 326 aa12.13□□□□□ -0.47
LIMS2-203ENST00000409254 CDK9P50750 372 aaKnown RBP12.13□□□□□ -0.47
LIMS2-203ENST00000409254 CLCN2P51788 898 aa12.13□□□□□ -0.47
LIMS2-203ENST00000409254 CHAF1BQ13112 559 aa12.13□□□□□ -0.47
LIMS2-203ENST00000409254 MYBPC3Q14896 1274 aa12.13□□□□□ -0.47
LIMS2-203ENST00000409254 EXOSC6Q5RKV6 272 aaKnown RBP12.13□□□□□ -0.47
LIMS2-203ENST00000409254 SAXO2Q658L1 398 aa12.13□□□□□ -0.47
LIMS2-203ENST00000409254 C8orf82Q6P1X6 216 aaPredicted RBP12.13□□□□□ -0.47
LIMS2-203ENST00000409254 DLEU7Q6UYE1 221 aa12.13□□□□□ -0.47
LIMS2-203ENST00000409254 RNF111Q6ZNA4 994 aa12.13□□□□□ -0.47
LIMS2-203ENST00000409254 LRRC69Q6ZNQ3 347 aa12.13□□□□□ -0.47
LIMS2-203ENST00000409254 GPR155Q7Z3F1 870 aa12.13□□□□□ -0.47
LIMS2-203ENST00000409254 RETREG3Q86VR2 466 aa12.13□□□□□ -0.47
LIMS2-203ENST00000409254 APLFQ8IW19 511 aaPredicted RBP12.13□□□□□ -0.47
LIMS2-203ENST00000409254 SPACA3Q8IXA5 215 aa12.13□□□□□ -0.47
LIMS2-203ENST00000409254 CLECL1Q8IZS7 167 aa12.13□□□□□ -0.47
LIMS2-203ENST00000409254 SHISA5Q8N114 240 aa12.13□□□□□ -0.47
LIMS2-203ENST00000409254 ARHGAP24Q8N264 748 aa12.13□□□□□ -0.47
LIMS2-203ENST00000409254 ZNF615Q8N8J6 731 aa12.13□□□□□ -0.47
LIMS2-203ENST00000409254 CDRT4Q8N9R6 151 aa12.13□□□□□ -0.47
LIMS2-203ENST00000409254 KDF1Q8NAX2 398 aaPredicted RBP12.13□□□□□ -0.47
LIMS2-203ENST00000409254 OR7G2Q8NG99 324 aa12.13□□□□□ -0.47
LIMS2-203ENST00000409254 ELP5Q8TE02 316 aa12.13□□□□□ -0.47
LIMS2-203ENST00000409254 ZNF721Q8TF20 911 aa12.13□□□□□ -0.47
LIMS2-203ENST00000409254 FAM120BQ96EK7 910 aaKnown RBP12.13□□□□□ -0.47
LIMS2-203ENST00000409254 NSL1Q96IY1 281 aa12.13□□□□□ -0.47
LIMS2-203ENST00000409254 BTBD9Q96Q07 612 aa12.13□□□□□ -0.47
LIMS2-203ENST00000409254 TRIM4Q9C037 500 aa12.13□□□□□ -0.47
LIMS2-203ENST00000409254 CXorf36Q9H7Y0 433 aa12.13□□□□□ -0.47
LIMS2-203ENST00000409254 DUSP22Q9NRW4 184 aa12.13□□□□□ -0.47
LIMS2-203ENST00000409254 ZCCHC3Q9NUD5 404 aaKnown RBP12.13□□□□□ -0.47
LIMS2-203ENST00000409254 FBXL4Q9UKA2 621 aa12.13□□□□□ -0.47
LIMS2-203ENST00000409254 ZNF451Q9Y4E5 1061 aa12.13□□□□□ -0.47
LIMS2-203ENST00000409254 PKD1L2Q7Z442 2459 aa12.12□□□□□ -0.47
LIMS2-203ENST00000409254 A0A1W2PS29 197 aa12.12□□□□□ -0.47
LIMS2-203ENST00000409254 DUXAA6NLW8 204 aa12.12□□□□□ -0.47
LIMS2-203ENST00000409254 FXYD1O00168 92 aa12.12□□□□□ -0.47
LIMS2-203ENST00000409254 ACOX3O15254 700 aa12.12□□□□□ -0.47
LIMS2-203ENST00000409254 AK1P00568 194 aa12.12□□□□□ -0.47
LIMS2-203ENST00000409254 SERPINA7P05543 415 aa12.12□□□□□ -0.47
LIMS2-203ENST00000409254 GUSBP08236 651 aa12.12□□□□□ -0.47
LIMS2-203ENST00000409254 CT62P0C5K7 136 aa12.12□□□□□ -0.47
LIMS2-203ENST00000409254 ESRRAP11474 423 aaPredicted RBP12.12□□□□□ -0.47
LIMS2-203ENST00000409254 BMP2P12643 396 aa12.12□□□□□ -0.47
LIMS2-203ENST00000409254 TNNI3P19429 210 aa12.12□□□□□ -0.47
LIMS2-203ENST00000409254 MAP3K8P41279 467 aa12.12□□□□□ -0.47
LIMS2-203ENST00000409254 PRIM2P49643 509 aa12.12□□□□□ -0.47
LIMS2-203ENST00000409254 TMPRSS3P57727 454 aa12.12□□□□□ -0.47
LIMS2-203ENST00000409254 TLE3Q04726 772 aa12.12□□□□□ -0.47
LIMS2-203ENST00000409254 GAB1Q13480 694 aa12.12□□□□□ -0.47
LIMS2-203ENST00000409254 NFYCQ13952 458 aa12.12□□□□□ -0.47
LIMS2-203ENST00000409254 LTB4RQ15722 352 aa12.12□□□□□ -0.47
LIMS2-203ENST00000409254 ZNF750Q32MQ0 723 aa12.12□□□□□ -0.47
LIMS2-203ENST00000409254 PAGE3Q5JUK9 113 aa12.12□□□□□ -0.47
LIMS2-203ENST00000409254 DCAF10Q5QP82 559 aa12.12□□□□□ -0.47
LIMS2-203ENST00000409254 H3F3CQ6NXT2 135 aa12.12□□□□□ -0.47
LIMS2-203ENST00000409254 SLC2A7Q6PXP3 512 aa12.12□□□□□ -0.47
LIMS2-203ENST00000409254 TMEM107Q6UX40 140 aa12.12□□□□□ -0.47
LIMS2-203ENST00000409254 HSDL2Q6YN16 418 aa12.12□□□□□ -0.47
LIMS2-203ENST00000409254 SLC29A4Q7RTT9 530 aa12.12□□□□□ -0.47
LIMS2-203ENST00000409254 YTHDF3Q7Z739 585 aaKnown RBP12.12□□□□□ -0.47
LIMS2-203ENST00000409254 VASH2Q86V25 355 aa12.12□□□□□ -0.47
LIMS2-203ENST00000409254 ANKRD46Q86W74 232 aa12.12□□□□□ -0.47
LIMS2-203ENST00000409254 DND1Q8IYX4 353 aaKnown RBP12.12□□□□□ -0.47
LIMS2-203ENST00000409254 CLEC1AQ8NC01 280 aa12.12□□□□□ -0.47
LIMS2-203ENST00000409254 OR5L2Q8NGL0 311 aa12.12□□□□□ -0.47
LIMS2-203ENST00000409254 ZFP90Q8TF47 636 aa12.12□□□□□ -0.47
LIMS2-203ENST00000409254 OIT3Q8WWZ8 545 aa12.12□□□□□ -0.47
LIMS2-203ENST00000409254 TP53INP1Q96A56 240 aa12.12□□□□□ -0.47
LIMS2-203ENST00000409254 LRRC58Q96CX6 371 aa12.12□□□□□ -0.47
LIMS2-203ENST00000409254 RCN3Q96D15 328 aa12.12□□□□□ -0.47
LIMS2-203ENST00000409254 ANKRD27Q96NW4 1050 aa12.12□□□□□ -0.47
LIMS2-203ENST00000409254 STACQ99469 402 aa12.12□□□□□ -0.47
LIMS2-203ENST00000409254 CGREF1Q99674 301 aa12.12□□□□□ -0.47
LIMS2-203ENST00000409254 SLC35A5Q9BS91 424 aa12.12□□□□□ -0.47
LIMS2-203ENST00000409254 CNPPD1Q9BV87 410 aa12.12□□□□□ -0.47
LIMS2-203ENST00000409254 OR10A5Q9H207 317 aa12.12□□□□□ -0.47
LIMS2-203ENST00000409254 EPS8L2Q9H6S3 715 aa12.12□□□□□ -0.47
LIMS2-203ENST00000409254 MAP10Q9P2G4 905 aa12.12□□□□□ -0.47
LIMS2-203ENST00000409254 ERVK-19Q9WJR5 959 aa12.12□□□□□ -0.47
LIMS2-203ENST00000409254 PCDHB14Q9Y5E9 798 aa12.12□□□□□ -0.47
LIMS2-203ENST00000409254 PCDHGB3Q9Y5G1 929 aa12.12□□□□□ -0.47
LIMS2-203ENST00000409254 HEMK1Q9Y5R4 338 aaPredicted RBP12.12□□□□□ -0.47
LIMS2-203ENST00000409254 ATMQ13315 3056 aa12.12□□□□□ -0.47
LIMS2-203ENST00000409254 TNRC6AQ8NDV7 1962 aaKnown RBP12.11□□□□□ -0.47
LIMS2-203ENST00000409254 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.11□□□□□ -0.47
LIMS2-203ENST00000409254 LOC100653049A0A140TA62 436 aa12.11□□□□□ -0.47
LIMS2-203ENST00000409254 OR2W5A6NFC9 320 aa12.11□□□□□ -0.47
LIMS2-203ENST00000409254 EVPLLA8MZ36 301 aa12.11□□□□□ -0.47
LIMS2-203ENST00000409254 K7ENP7 123 aa12.11□□□□□ -0.47
LIMS2-203ENST00000409254 EFSO43281 561 aa12.11□□□□□ -0.47
LIMS2-203ENST00000409254 KRT34O76011 436 aa12.11□□□□□ -0.47
LIMS2-203ENST00000409254 SEC24DO94855 1032 aaPredicted RBP12.11□□□□□ -0.47
LIMS2-203ENST00000409254 UNC5CO95185 931 aa12.11□□□□□ -0.47
LIMS2-203ENST00000409254 GPX2P18283 190 aa12.11□□□□□ -0.47
LIMS2-203ENST00000409254 LCN1P31025 176 aa12.11□□□□□ -0.47
LIMS2-203ENST00000409254 SOAT1P35610 550 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms