RNA–Protein interactions for RNA: ENST00000407019.6

NUP50-203, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 2,059 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-203ENST00000407019 KIAA0513O60268 411 aa15.86■□□□□ 0.13
NUP50-203ENST00000407019 TPST2O60704 377 aa15.86■□□□□ 0.13
NUP50-203ENST00000407019 C8orf89P0DMQ9 161 aa15.86■□□□□ 0.13
NUP50-203ENST00000407019 F3P13726 295 aa15.86■□□□□ 0.13
NUP50-203ENST00000407019 EN2P19622 333 aaPredicted RBP15.86■□□□□ 0.13
NUP50-203ENST00000407019 MMP11P24347 488 aa15.86■□□□□ 0.13
NUP50-203ENST00000407019 MAT2AP31153 395 aaKnown RBP15.86■□□□□ 0.13
NUP50-203ENST00000407019 SOX6P35712 828 aa15.86■□□□□ 0.13
NUP50-203ENST00000407019 BUD31P41223 144 aaPredicted RBP15.86■□□□□ 0.13
NUP50-203ENST00000407019 KIR2DL1P43626 348 aaPredicted RBP15.86■□□□□ 0.13
NUP50-203ENST00000407019 RAB8AP61006 207 aa15.86■□□□□ 0.13
NUP50-203ENST00000407019 PRR5P85299 388 aa15.86■□□□□ 0.13
NUP50-203ENST00000407019 ZNF91Q05481 1191 aa15.86■□□□□ 0.13
NUP50-203ENST00000407019 NCF4Q15080 339 aa15.86■□□□□ 0.13
NUP50-203ENST00000407019 SSX1Q16384 188 aa15.86■□□□□ 0.13
NUP50-203ENST00000407019 WDR53Q7Z5U6 358 aaPredicted RBP15.86■□□□□ 0.13
NUP50-203ENST00000407019 TCEANCQ8N8B7 351 aa15.86■□□□□ 0.13
NUP50-203ENST00000407019 JPH3Q8WXH2 748 aaPredicted RBP15.86■□□□□ 0.13
NUP50-203ENST00000407019 PINK1Q9BXM7 581 aa15.86■□□□□ 0.13
NUP50-203ENST00000407019 RACGAP1Q9H0H5 632 aa15.86■□□□□ 0.13
NUP50-203ENST00000407019 TVP23BQ9NYZ1 205 aa15.86■□□□□ 0.13
NUP50-203ENST00000407019 SCHIP1Q9P0W5 487 aaPredicted RBP15.86■□□□□ 0.13
NUP50-203ENST00000407019 CES1P1Q9UKY3 287 aa15.86■□□□□ 0.13
NUP50-203ENST00000407019 ISPDA4D126 451 aa15.85■□□□□ 0.13
NUP50-203ENST00000407019 ISM1B1AKI9 464 aa15.85■□□□□ 0.13
NUP50-203ENST00000407019 K7EQS6 105 aa15.85■□□□□ 0.13
NUP50-203ENST00000407019 EMC8O43402 210 aa15.85■□□□□ 0.13
NUP50-203ENST00000407019 DNTTP04053 509 aa15.85■□□□□ 0.13
NUP50-203ENST00000407019 SCG5P05408 212 aa15.85■□□□□ 0.13
NUP50-203ENST00000407019 TNFRSF4P43489 277 aa15.85■□□□□ 0.13
NUP50-203ENST00000407019 ADPRHP54922 357 aa15.85■□□□□ 0.13
NUP50-203ENST00000407019 STXBP1P61764 594 aaKnown RBP15.85■□□□□ 0.13
NUP50-203ENST00000407019 PRKCDQ05655 676 aa15.85■□□□□ 0.13
NUP50-203ENST00000407019 DOC2BQ14184 412 aa15.85■□□□□ 0.13
NUP50-203ENST00000407019 ZNF181Q2M3W8 571 aa15.85■□□□□ 0.13
NUP50-203ENST00000407019 PRAMEF8Q5VWM4 474 aa15.85■□□□□ 0.13
NUP50-203ENST00000407019 PRAMEF7Q5VXH5 474 aa15.85■□□□□ 0.13
NUP50-203ENST00000407019 ZNF425Q6IV72 752 aa15.85■□□□□ 0.13
NUP50-203ENST00000407019 IQCHQ86VS3 1027 aa15.85■□□□□ 0.13
NUP50-203ENST00000407019 SLC22A16Q86VW1 577 aa15.85■□□□□ 0.13
NUP50-203ENST00000407019 SLC34A3Q8N130 599 aa15.85■□□□□ 0.13
NUP50-203ENST00000407019 IQCF1Q8N6M8 205 aa15.85■□□□□ 0.13
NUP50-203ENST00000407019 FAM131CQ96AQ9 280 aa15.85■□□□□ 0.13
NUP50-203ENST00000407019 ELSPBP1Q96BH3 223 aa15.85■□□□□ 0.13
NUP50-203ENST00000407019 C16orf58Q96GQ5 468 aa15.85■□□□□ 0.13
NUP50-203ENST00000407019 SLC6A18Q96N87 628 aa15.85■□□□□ 0.13
NUP50-203ENST00000407019 MND1Q9BWT6 205 aa15.85■□□□□ 0.13
NUP50-203ENST00000407019 TSSK6Q9BXA6 273 aa15.85■□□□□ 0.13
NUP50-203ENST00000407019 FGF22Q9HCT0 170 aa15.85■□□□□ 0.13
NUP50-203ENST00000407019 ABCB10Q9NRK6 738 aa15.85■□□□□ 0.13
NUP50-203ENST00000407019 APOBEC3BQ9UH17 382 aaKnown RBP15.85■□□□□ 0.13
NUP50-203ENST00000407019 MKLN1Q9UL63 735 aa15.85■□□□□ 0.13
NUP50-203ENST00000407019 SNX7Q9UNH6 387 aa15.85■□□□□ 0.13
NUP50-203ENST00000407019 CFL2Q9Y281 166 aa15.85■□□□□ 0.13
NUP50-203ENST00000407019 KLHL20Q9Y2M5 609 aa15.85■□□□□ 0.13
NUP50-203ENST00000407019 LSM2Q9Y333 95 aaKnown RBP15.85■□□□□ 0.13
NUP50-203ENST00000407019 PEX16Q9Y5Y5 336 aa15.85■□□□□ 0.13
NUP50-203ENST00000407019 COLEC10Q9Y6Z7 277 aa15.85■□□□□ 0.13
NUP50-203ENST00000407019 A0A1W2PS29 197 aa15.85■□□□□ 0.13
NUP50-203ENST00000407019 CSO75390 466 aaKnown RBP15.85■□□□□ 0.13
NUP50-203ENST00000407019 MPIP34949 423 aa15.85■□□□□ 0.13
NUP50-203ENST00000407019 RPS3AP61247 264 aaKnown RBP15.85■□□□□ 0.13
NUP50-203ENST00000407019 ZNF45Q02386 682 aa15.85■□□□□ 0.13
NUP50-203ENST00000407019 TGM3Q08188 693 aa15.85■□□□□ 0.13
NUP50-203ENST00000407019 PARM1Q6UWI2 310 aa15.85■□□□□ 0.13
NUP50-203ENST00000407019 ZER1Q7Z7L7 766 aa15.85■□□□□ 0.13
NUP50-203ENST00000407019 LYSMD2Q8IV50 215 aa15.85■□□□□ 0.13
NUP50-203ENST00000407019 CYP4Z2PQ8N1L4 340 aa15.85■□□□□ 0.13
NUP50-203ENST00000407019 CLIP4Q8N3C7 705 aa15.85■□□□□ 0.13
NUP50-203ENST00000407019 MORN4Q8NDC4 146 aa15.85■□□□□ 0.13
NUP50-203ENST00000407019 SCARF2Q96GP6 870 aaPredicted RBP15.85■□□□□ 0.13
NUP50-203ENST00000407019 OR2M4Q96R27 311 aa15.85■□□□□ 0.13
NUP50-203ENST00000407019 OR7D2Q96RA2 312 aa15.85■□□□□ 0.13
NUP50-203ENST00000407019 CDCA3Q99618 268 aaPredicted RBP15.85■□□□□ 0.13
NUP50-203ENST00000407019 TRMT61BQ9BVS5 477 aaKnown RBP15.85■□□□□ 0.13
NUP50-203ENST00000407019 POLDIP3Q9BY77 421 aaKnown RBP15.85■□□□□ 0.13
NUP50-203ENST00000407019 SLC6A17Q9H1V8 727 aa15.85■□□□□ 0.13
NUP50-203ENST00000407019 SYNPO2LQ9H987 977 aa15.85■□□□□ 0.13
NUP50-203ENST00000407019 POLE4Q9NR33 117 aa15.85■□□□□ 0.13
NUP50-203ENST00000407019 YBX2Q9Y2T7 364 aaKnown RBP15.85■□□□□ 0.13
NUP50-203ENST00000407019 DOCK9Q9BZ29 2069 aa15.85■□□□□ 0.13
NUP50-203ENST00000407019 TBC1D3DA0A087WVF3 549 aa15.84■□□□□ 0.13
NUP50-203ENST00000407019 TBC1D3IA0A087WXS9 549 aa15.84■□□□□ 0.13
NUP50-203ENST00000407019 TBC1D3EA0A087X179 549 aa15.84■□□□□ 0.13
NUP50-203ENST00000407019 TBC1D3KA0A087X1G2 549 aa15.84■□□□□ 0.13
NUP50-203ENST00000407019 TBC1D3FA6NER0 549 aaPredicted RBP15.84■□□□□ 0.13
NUP50-203ENST00000407019 TBC1D3LB9A6J9 549 aa15.84■□□□□ 0.13
NUP50-203ENST00000407019 ASGR2P07307 311 aa15.84■□□□□ 0.13
NUP50-203ENST00000407019 TBC1D3HP0C7X1 549 aa15.84■□□□□ 0.13
NUP50-203ENST00000407019 CKMT1AP12532 417 aa15.84■□□□□ 0.13
NUP50-203ENST00000407019 PCYT1AP49585 367 aa15.84■□□□□ 0.13
NUP50-203ENST00000407019 MAN2A2P49641 1150 aa15.84■□□□□ 0.13
NUP50-203ENST00000407019 INAVAQ3KP66 663 aa15.84■□□□□ 0.13
NUP50-203ENST00000407019 AGAP7PQ5VUJ5 663 aa15.84■□□□□ 0.13
NUP50-203ENST00000407019 TBC1D3GQ6DHY5 549 aa15.84■□□□□ 0.13
NUP50-203ENST00000407019 TBC1D3CQ6IPX1 549 aa15.84■□□□□ 0.13
NUP50-203ENST00000407019 C1orf94Q6P1W5 598 aa15.84■□□□□ 0.13
NUP50-203ENST00000407019 TRIM69Q86WT6 500 aa15.84■□□□□ 0.13
NUP50-203ENST00000407019 TBC1D3Q8IZP1 549 aaPredicted RBP15.84■□□□□ 0.13
NUP50-203ENST00000407019 FAM26EQ8N5C1 309 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms