RNA–Protein interactions for RNA: ENST00000406949.5

PCNX4-204, Transcript of pecanex 4, humanhuman

TSL 2 BASIC

Gene PCNX4, Length 3,513 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-204ENST00000406949 SRMSQ9H3Y6 488 aa11.25□□□□□ -0.61
PCNX4-204ENST00000406949 AKIP1Q9NQ31 210 aa11.25□□□□□ -0.61
PCNX4-204ENST00000406949 SPAG17Q6Q759 2223 aa11.25□□□□□ -0.61
PCNX4-204ENST00000406949 CXorf51AA0A1B0GTR3 108 aa11.25□□□□□ -0.61
PCNX4-204ENST00000406949 SAGE2PA6NJ88 616 aa11.25□□□□□ -0.61
PCNX4-204ENST00000406949 LRRC72A6NJI9 287 aa11.25□□□□□ -0.61
PCNX4-204ENST00000406949 LILRB5O75023 590 aa11.25□□□□□ -0.61
PCNX4-204ENST00000406949 TMCC2O75069 709 aa11.25□□□□□ -0.61
PCNX4-204ENST00000406949 CDRT1O95170 752 aa11.25□□□□□ -0.61
PCNX4-204ENST00000406949 CPN2P22792 545 aa11.25□□□□□ -0.61
PCNX4-204ENST00000406949 IFNGR2P38484 337 aa11.25□□□□□ -0.61
PCNX4-204ENST00000406949 PDE7AQ13946 482 aa11.25□□□□□ -0.61
PCNX4-204ENST00000406949 CRTC2Q53ET0 693 aaPredicted RBP11.25□□□□□ -0.61
PCNX4-204ENST00000406949 PDZK1Q5T2W1 519 aa11.25□□□□□ -0.61
PCNX4-204ENST00000406949 UBE2UQ5VVX9 321 aa11.25□□□□□ -0.61
PCNX4-204ENST00000406949 CYP4Z2PQ8N1L4 340 aa11.25□□□□□ -0.61
PCNX4-204ENST00000406949 TBC1D20Q96BZ9 403 aa11.25□□□□□ -0.61
PCNX4-204ENST00000406949 C11orf24Q96F05 449 aaPredicted RBP11.25□□□□□ -0.61
PCNX4-204ENST00000406949 BCL7BQ9BQE9 202 aa11.25□□□□□ -0.61
PCNX4-204ENST00000406949 TBC1D17Q9HA65 648 aa11.25□□□□□ -0.61
PCNX4-204ENST00000406949 ATG4BQ9Y4P1 393 aa11.25□□□□□ -0.61
PCNX4-204ENST00000406949 PLXNA4Q9HCM2 1894 aa11.24□□□□□ -0.61
PCNX4-204ENST00000406949 ARHGAP33O14559 1287 aa11.24□□□□□ -0.61
PCNX4-204ENST00000406949 HAT1O14929 419 aa11.24□□□□□ -0.61
PCNX4-204ENST00000406949 SERPINI2O75830 405 aa11.24□□□□□ -0.61
PCNX4-204ENST00000406949 KLHL12Q53G59 568 aa11.24□□□□□ -0.61
PCNX4-204ENST00000406949 ZNF776Q68DI1 518 aaPredicted RBP11.24□□□□□ -0.61
PCNX4-204ENST00000406949 FAM109BQ6ICB4 259 aaPredicted RBP11.24□□□□□ -0.61
PCNX4-204ENST00000406949 PAQR6Q6TCH4 344 aa11.24□□□□□ -0.61
PCNX4-204ENST00000406949 FAM131AQ6UXB0 335 aa11.24□□□□□ -0.61
PCNX4-204ENST00000406949 TMPRSS11AQ6ZMR5 421 aa11.24□□□□□ -0.61
PCNX4-204ENST00000406949 LACC1Q8IV20 430 aa11.24□□□□□ -0.61
PCNX4-204ENST00000406949 ZBTB8BQ8NAP8 495 aaPredicted RBP11.24□□□□□ -0.61
PCNX4-204ENST00000406949 NUP43Q8NFH3 380 aa11.24□□□□□ -0.61
PCNX4-204ENST00000406949 OR8J1Q8NGP2 316 aa11.24□□□□□ -0.61
PCNX4-204ENST00000406949 TBX5Q99593 518 aa11.24□□□□□ -0.61
PCNX4-204ENST00000406949 CRISPLD2Q9H0B8 497 aa11.24□□□□□ -0.61
PCNX4-204ENST00000406949 CHST8Q9H2A9 424 aa11.24□□□□□ -0.61
PCNX4-204ENST00000406949 MVB12BQ9H7P6 319 aa11.24□□□□□ -0.61
PCNX4-204ENST00000406949 B3GNT3Q9Y2A9 372 aa11.24□□□□□ -0.61
PCNX4-204ENST00000406949 NAALAD2Q9Y3Q0 740 aa11.24□□□□□ -0.61
PCNX4-204ENST00000406949 AGAP5A6NIR3 686 aa11.24□□□□□ -0.61
PCNX4-204ENST00000406949 BTN3A3O00478 584 aa11.24□□□□□ -0.61
PCNX4-204ENST00000406949 MFN2O95140 757 aa11.24□□□□□ -0.61
PCNX4-204ENST00000406949 SEMG1P04279 462 aa11.24□□□□□ -0.61
PCNX4-204ENST00000406949 GRK5P34947 590 aa11.24□□□□□ -0.61
PCNX4-204ENST00000406949 BCL6P41182 706 aa11.24□□□□□ -0.61
PCNX4-204ENST00000406949 SIM1P81133 766 aaPredicted RBP11.24□□□□□ -0.61
PCNX4-204ENST00000406949 ARHGAP19Q14CB8 494 aa11.24□□□□□ -0.61
PCNX4-204ENST00000406949 TMEM52BQ4KMG9 183 aa11.24□□□□□ -0.61
PCNX4-204ENST00000406949 FAM92BQ6ZTR7 304 aa11.24□□□□□ -0.61
PCNX4-204ENST00000406949 TSEN54Q7Z6J9 526 aaKnown RBP11.24□□□□□ -0.61
PCNX4-204ENST00000406949 UBE2Q1Q7Z7E8 422 aa11.24□□□□□ -0.61
PCNX4-204ENST00000406949 LHFPL3Q86UP9 236 aa11.24□□□□□ -0.61
PCNX4-204ENST00000406949 LAPTM4BQ86VI4 370 aa11.24□□□□□ -0.61
PCNX4-204ENST00000406949 ETFBKMTQ8IXQ9 262 aa11.24□□□□□ -0.61
PCNX4-204ENST00000406949 PEX5LQ8IYB4 626 aa11.24□□□□□ -0.61
PCNX4-204ENST00000406949 LINC01555Q8NAE3 123 aa11.24□□□□□ -0.61
PCNX4-204ENST00000406949 TTLQ8NG68 377 aa11.24□□□□□ -0.61
PCNX4-204ENST00000406949 OR6T1Q8NGN1 323 aa11.24□□□□□ -0.61
PCNX4-204ENST00000406949 GOT1L1Q8NHS2 421 aaPredicted RBP11.24□□□□□ -0.61
PCNX4-204ENST00000406949 TSACCQ96A04 125 aaPredicted RBP11.24□□□□□ -0.61
PCNX4-204ENST00000406949 SLC17A9Q9BYT1 436 aa11.24□□□□□ -0.61
PCNX4-204ENST00000406949 SLIRPQ9GZT3 109 aaKnown RBP11.24□□□□□ -0.61
PCNX4-204ENST00000406949 EGLN3Q9H6Z9 239 aa11.24□□□□□ -0.61
PCNX4-204ENST00000406949 TIGARQ9NQ88 270 aa11.24□□□□□ -0.61
PCNX4-204ENST00000406949 NOTCH4Q99466 2003 aa11.24□□□□□ -0.61
PCNX4-204ENST00000406949 COL4A6Q14031 1691 aa11.24□□□□□ -0.61
PCNX4-204ENST00000406949 MYO15AQ9UKN7 3530 aa11.24□□□□□ -0.61
PCNX4-204ENST00000406949 RNGTTO60942 597 aaKnown RBP11.23□□□□□ -0.61
PCNX4-204ENST00000406949 SLC35G6P0C7Q6 338 aa11.23□□□□□ -0.61
PCNX4-204ENST00000406949 CSTF2P33240 577 aaKnown RBP eCLIP11.23□□□□□ -0.61
PCNX4-204ENST00000406949 TGFBR2P37173 567 aa11.23□□□□□ -0.61
PCNX4-204ENST00000406949 GPR4P46093 362 aa11.23□□□□□ -0.61
PCNX4-204ENST00000406949 NKX2-5P52952 324 aaPredicted RBP11.23□□□□□ -0.61
PCNX4-204ENST00000406949 STXBP1P61764 594 aaKnown RBP11.23□□□□□ -0.61
PCNX4-204ENST00000406949 REEP5Q00765 189 aa11.23□□□□□ -0.61
PCNX4-204ENST00000406949 ZNF91Q05481 1191 aa11.23□□□□□ -0.61
PCNX4-204ENST00000406949 LTB4RQ15722 352 aa11.23□□□□□ -0.61
PCNX4-204ENST00000406949 PIP5KL1Q5T9C9 394 aa11.23□□□□□ -0.61
PCNX4-204ENST00000406949 AKAP14Q86UN6 197 aa11.23□□□□□ -0.61
PCNX4-204ENST00000406949 GPR32P1Q8NGA4 272 aa11.23□□□□□ -0.61
PCNX4-204ENST00000406949 CAPSLQ8WWF8 208 aa11.23□□□□□ -0.61
PCNX4-204ENST00000406949 FAM46AQ96IP4 442 aaKnown RBP11.23□□□□□ -0.61
PCNX4-204ENST00000406949 AMDHD1Q96NU7 426 aa11.23□□□□□ -0.61
PCNX4-204ENST00000406949 CCDC3Q9BQI4 270 aa11.23□□□□□ -0.61
PCNX4-204ENST00000406949 SPHK1Q9NYA1 384 aa11.23□□□□□ -0.61
PCNX4-204ENST00000406949 COLEC10Q9Y6Z7 277 aa11.23□□□□□ -0.61
PCNX4-204ENST00000406949 PMF1-BGLAPU3KQ54 211 aa11.23□□□□□ -0.61
PCNX4-204ENST00000406949 HIST1H1TP22492 207 aaPredicted RBP11.23□□□□□ -0.61
PCNX4-204ENST00000406949 CBLP22681 906 aa11.23□□□□□ -0.61
PCNX4-204ENST00000406949 C21orf58P58505 322 aa11.23□□□□□ -0.61
PCNX4-204ENST00000406949 C6orf132Q5T0Z8 1188 aa11.23□□□□□ -0.61
PCNX4-204ENST00000406949 SAXO2Q658L1 398 aa11.23□□□□□ -0.61
PCNX4-204ENST00000406949 C22orf42Q6IC83 251 aa11.23□□□□□ -0.61
PCNX4-204ENST00000406949 ADAMTSL4Q6UY14 1074 aa11.23□□□□□ -0.61
PCNX4-204ENST00000406949 HSDL2Q6YN16 418 aa11.23□□□□□ -0.61
PCNX4-204ENST00000406949 VRK2Q86Y07 508 aa11.23□□□□□ -0.61
PCNX4-204ENST00000406949 KCT2Q8NC54 265 aa11.23□□□□□ -0.61
PCNX4-204ENST00000406949 SRFBP1Q8NEF9 429 aaKnown RBP11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms