RNA–Protein interactions for RNA: ENST00000406438.4

SMCR8-201, Transcript of Smith-Magenis syndrome chromosome region, candidate 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCR8, Length 8,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCR8-201ENST00000406438 ANKK1Q8NFD2 765 aa11.52□□□□□ -0.57
SMCR8-201ENST00000406438 HDAC2Q92769 488 aaKnown RBP11.52□□□□□ -0.57
SMCR8-201ENST00000406438 SECISBP2Q96T21 854 aaKnown RBP11.52□□□□□ -0.57
SMCR8-201ENST00000406438 FEZF1A0PJY2 475 aa11.51□□□□□ -0.57
SMCR8-201ENST00000406438 COCHO43405 550 aa11.51□□□□□ -0.57
SMCR8-201ENST00000406438 RASAL1O95294 804 aa11.51□□□□□ -0.57
SMCR8-201ENST00000406438 HBQ1P09105 142 aa11.51□□□□□ -0.57
SMCR8-201ENST00000406438 NAA10P41227 235 aaPredicted RBP11.51□□□□□ -0.57
SMCR8-201ENST00000406438 LSSP48449 732 aa11.51□□□□□ -0.57
SMCR8-201ENST00000406438 MEF2AQ02078 507 aaPredicted RBP11.51□□□□□ -0.57
SMCR8-201ENST00000406438 OR5H2Q8NGV7 314 aa11.51□□□□□ -0.57
SMCR8-201ENST00000406438 PEX13Q92968 403 aa11.51□□□□□ -0.57
SMCR8-201ENST00000406438 ISOC1Q96CN7 298 aa11.51□□□□□ -0.57
SMCR8-201ENST00000406438 MALSU1Q96EH3 234 aa11.51□□□□□ -0.57
SMCR8-201ENST00000406438 GIMAP5Q96F15 307 aa11.51□□□□□ -0.57
SMCR8-201ENST00000406438 FBXL20Q96IG2 436 aa11.51□□□□□ -0.57
SMCR8-201ENST00000406438 BMFQ96LC9 184 aa11.51□□□□□ -0.57
SMCR8-201ENST00000406438 TSNAXQ99598 290 aaKnown RBP11.51□□□□□ -0.57
SMCR8-201ENST00000406438 SYT17Q9BSW7 474 aa11.51□□□□□ -0.57
SMCR8-201ENST00000406438 MAGED1Q9Y5V3 778 aaPredicted RBP11.51□□□□□ -0.57
SMCR8-201ENST00000406438 KLF11O14901 512 aa11.51□□□□□ -0.57
SMCR8-201ENST00000406438 CYB5BO43169 146 aa11.51□□□□□ -0.57
SMCR8-201ENST00000406438 AK1P00568 194 aa11.51□□□□□ -0.57
SMCR8-201ENST00000406438 CHMP24386 653 aa11.51□□□□□ -0.57
SMCR8-201ENST00000406438 TIA1P31483 386 aaKnown RBP eCLIP11.51□□□□□ -0.57
SMCR8-201ENST00000406438 ZNF616Q08AN1 781 aa11.51□□□□□ -0.57
SMCR8-201ENST00000406438 UPP1Q16831 310 aa11.51□□□□□ -0.57
SMCR8-201ENST00000406438 AP1M2Q9Y6Q5 423 aa11.51□□□□□ -0.57
SMCR8-201ENST00000406438 GPR37L1O60883 481 aa11.51□□□□□ -0.57
SMCR8-201ENST00000406438 RFPL1O75677 317 aa11.51□□□□□ -0.57
SMCR8-201ENST00000406438 AKR1C4P17516 323 aa11.51□□□□□ -0.57
SMCR8-201ENST00000406438 GGT5P36269 586 aa11.51□□□□□ -0.57
SMCR8-201ENST00000406438 ERVK-16P61578 105 aa11.51□□□□□ -0.57
SMCR8-201ENST00000406438 RRAS2P62070 204 aaPredicted RBP11.51□□□□□ -0.57
SMCR8-201ENST00000406438 NTRK2Q16620 822 aa11.51□□□□□ -0.57
SMCR8-201ENST00000406438 RHEBL1Q8TAI7 183 aa11.51□□□□□ -0.57
SMCR8-201ENST00000406438 SLC25A44Q96H78 314 aaPredicted RBP11.51□□□□□ -0.57
SMCR8-201ENST00000406438 SYT3Q9BQG1 590 aa11.51□□□□□ -0.57
SMCR8-201ENST00000406438 GPR174Q9BXC1 333 aa11.51□□□□□ -0.57
SMCR8-201ENST00000406438 NENFQ9UMX5 172 aa11.51□□□□□ -0.57
SMCR8-201ENST00000406438 STUB1Q9UNE7 303 aa11.51□□□□□ -0.57
SMCR8-201ENST00000406438 GABBR2O75899 941 aa11.51□□□□□ -0.57
SMCR8-201ENST00000406438 HAPLN1P10915 354 aaPredicted RBP11.51□□□□□ -0.57
SMCR8-201ENST00000406438 AKR1C2P52895 323 aa11.51□□□□□ -0.57
SMCR8-201ENST00000406438 CATSPEREQ5SY80 951 aa11.51□□□□□ -0.57
SMCR8-201ENST00000406438 SERINC5Q86VE9 423 aa11.51□□□□□ -0.57
SMCR8-201ENST00000406438 GLYATL2Q8WU03 294 aa11.51□□□□□ -0.57
SMCR8-201ENST00000406438 ZDHHC18Q9NUE0 388 aa11.51□□□□□ -0.57
SMCR8-201ENST00000406438 CKAP5Q14008 2032 aa11.51□□□□□ -0.57
SMCR8-201ENST00000406438 HMX3A6NHT5 357 aa11.51□□□□□ -0.57
SMCR8-201ENST00000406438 RTCAO00442 366 aaKnown RBP11.51□□□□□ -0.57
SMCR8-201ENST00000406438 CSF2P04141 144 aa11.51□□□□□ -0.57
SMCR8-201ENST00000406438 RPS2P15880 293 aaKnown RBP11.51□□□□□ -0.57
SMCR8-201ENST00000406438 ARSFP54793 590 aa11.51□□□□□ -0.57
SMCR8-201ENST00000406438 ZNF280AP59817 542 aaPredicted RBP11.51□□□□□ -0.57
SMCR8-201ENST00000406438 ACTBP60709 375 aa11.51□□□□□ -0.57
SMCR8-201ENST00000406438 ACTG1P63261 375 aa11.51□□□□□ -0.57
SMCR8-201ENST00000406438 OGDHQ02218 1023 aa11.51□□□□□ -0.57
SMCR8-201ENST00000406438 LAPTM4AQ15012 233 aa11.51□□□□□ -0.57
SMCR8-201ENST00000406438 DPY19L4Q7Z388 723 aa11.51□□□□□ -0.57
SMCR8-201ENST00000406438 KRTCAP2Q8N6L1 136 aa11.51□□□□□ -0.57
SMCR8-201ENST00000406438 OR56B2PQ8NGI1 322 aa11.51□□□□□ -0.57
SMCR8-201ENST00000406438 OR52P1PQ8NH57 321 aa11.51□□□□□ -0.57
SMCR8-201ENST00000406438 TRIB2Q92519 343 aa11.51□□□□□ -0.57
SMCR8-201ENST00000406438 ZNF689Q96CS4 500 aaPredicted RBP11.51□□□□□ -0.57
SMCR8-201ENST00000406438 PCTPQ9UKL6 214 aa11.51□□□□□ -0.57
SMCR8-201ENST00000406438 OR6C6A6NF89 314 aa11.51□□□□□ -0.57
SMCR8-201ENST00000406438 C1GALT1C1LP0DN25 315 aa11.51□□□□□ -0.57
SMCR8-201ENST00000406438 CHRNB4P30926 498 aa11.51□□□□□ -0.57
SMCR8-201ENST00000406438 RABIFP47224 123 aa11.51□□□□□ -0.57
SMCR8-201ENST00000406438 RAB4BP61018 213 aa11.51□□□□□ -0.57
SMCR8-201ENST00000406438 ZDHHC24Q6UX98 284 aa11.51□□□□□ -0.57
SMCR8-201ENST00000406438 TSPEARQ8WU66 669 aa11.51□□□□□ -0.57
SMCR8-201ENST00000406438 VRK1Q99986 396 aaPredicted RBP11.51□□□□□ -0.57
SMCR8-201ENST00000406438 CD93Q9NPY3 652 aa11.51□□□□□ -0.57
SMCR8-201ENST00000406438 LAMB1P07942 1786 aa11.51□□□□□ -0.57
SMCR8-201ENST00000406438 F7P08709 466 aaPredicted RBP11.51□□□□□ -0.57
SMCR8-201ENST00000406438 ACVR1BP36896 505 aa11.51□□□□□ -0.57
SMCR8-201ENST00000406438 HK3P52790 923 aa11.51□□□□□ -0.57
SMCR8-201ENST00000406438 GPR17Q13304 367 aa11.51□□□□□ -0.57
SMCR8-201ENST00000406438 PTPRRQ15256 657 aa11.51□□□□□ -0.57
SMCR8-201ENST00000406438 ATP6AP1Q15904 470 aa11.51□□□□□ -0.57
SMCR8-201ENST00000406438 CCDC58Q4VC31 144 aa11.51□□□□□ -0.57
SMCR8-201ENST00000406438 C22orf42Q6IC83 251 aa11.51□□□□□ -0.57
SMCR8-201ENST00000406438 ADAMTS10Q9H324 1103 aa11.51□□□□□ -0.57
SMCR8-201ENST00000406438 WDR37Q9Y2I8 494 aa11.51□□□□□ -0.57
SMCR8-201ENST00000406438 B3GALT1Q9Y5Z6 326 aa11.51□□□□□ -0.57
SMCR8-201ENST00000406438 FAM189A1O60320 539 aa11.5□□□□□ -0.57
SMCR8-201ENST00000406438 GCGRP47871 477 aa11.5□□□□□ -0.57
SMCR8-201ENST00000406438 JPH3Q8WXH2 748 aaPredicted RBP11.5□□□□□ -0.57
SMCR8-201ENST00000406438 MSLNLQ96KJ4 702 aa11.5□□□□□ -0.57
SMCR8-201ENST00000406438 SPHK2Q9NRA0 654 aa11.5□□□□□ -0.57
SMCR8-201ENST00000406438 IL20RAQ9UHF4 553 aa11.5□□□□□ -0.57
SMCR8-201ENST00000406438 IGLON5A6NGN9 336 aa11.5□□□□□ -0.57
SMCR8-201ENST00000406438 RHOP08100 348 aa11.5□□□□□ -0.57
SMCR8-201ENST00000406438 ART1P52961 327 aa11.5□□□□□ -0.57
SMCR8-201ENST00000406438 DEFB134Q4QY38 66 aa11.5□□□□□ -0.57
SMCR8-201ENST00000406438 OR4C11Q6IEV9 310 aa11.5□□□□□ -0.57
SMCR8-201ENST00000406438 CMTM1Q8IZ96 169 aa11.5□□□□□ -0.57
SMCR8-201ENST00000406438 OR52E2Q8NGJ4 325 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms