RNA–Protein interactions for RNA: ENST00000405807.8

COL4A3BP-204, Transcript of collagen type IV alpha 3 binding protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A3BP, Length 2,843 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-204ENST00000405807 C9orf152Q5JTZ5 239 aa15.37■□□□□ 0.05
COL4A3BP-204ENST00000405807 CPTPQ5TA50 214 aa15.37■□□□□ 0.05
COL4A3BP-204ENST00000405807 PTCHD4Q6ZW05 846 aa15.37■□□□□ 0.05
COL4A3BP-204ENST00000405807 NAGSQ8N159 534 aa15.37■□□□□ 0.05
COL4A3BP-204ENST00000405807 KRT78Q8N1N4 520 aa15.37■□□□□ 0.05
COL4A3BP-204ENST00000405807 NXPE1Q8N323 547 aa15.37■□□□□ 0.05
COL4A3BP-204ENST00000405807 WDFY2Q96P53 400 aa15.37■□□□□ 0.05
COL4A3BP-204ENST00000405807 PFDN5Q99471 154 aa15.37■□□□□ 0.05
COL4A3BP-204ENST00000405807 GSX2Q9BZM3 304 aa15.37■□□□□ 0.05
COL4A3BP-204ENST00000405807 SPHK1Q9NYA1 384 aa15.37■□□□□ 0.05
COL4A3BP-204ENST00000405807 NDRG3Q9UGV2 375 aa15.37■□□□□ 0.05
COL4A3BP-204ENST00000405807 M0R129 80 aa15.37■□□□□ 0.05
COL4A3BP-204ENST00000405807 LGALS8O00214 317 aa15.37■□□□□ 0.05
COL4A3BP-204ENST00000405807 GCM2O75603 506 aaPredicted RBP15.37■□□□□ 0.05
COL4A3BP-204ENST00000405807 RLN2P04090 185 aa15.37■□□□□ 0.05
COL4A3BP-204ENST00000405807 SCG5P05408 212 aa15.37■□□□□ 0.05
COL4A3BP-204ENST00000405807 C8GP07360 202 aa15.37■□□□□ 0.05
COL4A3BP-204ENST00000405807 BPIP17213 487 aa15.37■□□□□ 0.05
COL4A3BP-204ENST00000405807 NSG1P42857 185 aa15.37■□□□□ 0.05
COL4A3BP-204ENST00000405807 SLC6A12P48065 614 aa15.37■□□□□ 0.05
COL4A3BP-204ENST00000405807 HYAL2Q12891 473 aa15.37■□□□□ 0.05
COL4A3BP-204ENST00000405807 PUM1Q14671 1186 aaKnown RBP eCLIP15.37■□□□□ 0.052e-6■■□□□ 13.4
COL4A3BP-204ENST00000405807 TATDN3Q17R31 274 aa15.37■□□□□ 0.05
COL4A3BP-204ENST00000405807 ZXDCQ2QGD7 858 aaPredicted RBP15.37■□□□□ 0.05
COL4A3BP-204ENST00000405807 COL28A1Q2UY09 1125 aa15.37■□□□□ 0.05
COL4A3BP-204ENST00000405807 ANXA8L1Q5VT79 327 aa15.37■□□□□ 0.05
COL4A3BP-204ENST00000405807 LRRC66Q68CR7 880 aa15.37■□□□□ 0.05
COL4A3BP-204ENST00000405807 CXorf57Q6NSI4 855 aaKnown RBP15.37■□□□□ 0.05
COL4A3BP-204ENST00000405807 ZNF852Q6ZMS4 543 aa15.37■□□□□ 0.05
COL4A3BP-204ENST00000405807 BBS4Q96RK4 519 aa15.37■□□□□ 0.05
COL4A3BP-204ENST00000405807 COPS8Q99627 209 aa15.37■□□□□ 0.05
COL4A3BP-204ENST00000405807 CLEC4MQ9H2X3 399 aaPredicted RBP15.37■□□□□ 0.05
COL4A3BP-204ENST00000405807 MCUBQ9NWR8 336 aa15.37■□□□□ 0.05
COL4A3BP-204ENST00000405807 SLC22A14Q9Y267 594 aa15.37■□□□□ 0.05
COL4A3BP-204ENST00000405807 C1orf226A1L170 272 aa15.36■□□□□ 0.05
COL4A3BP-204ENST00000405807 SLC35F4A4IF30 521 aa15.36■□□□□ 0.05
COL4A3BP-204ENST00000405807 A6NCN8 305 aa15.36■□□□□ 0.05
COL4A3BP-204ENST00000405807 WASHC1A8K0Z3 465 aa15.36■□□□□ 0.05
COL4A3BP-204ENST00000405807 CLDN7O95471 211 aa15.36■□□□□ 0.05
COL4A3BP-204ENST00000405807 RD3LP0DJH9 198 aa15.36■□□□□ 0.05
COL4A3BP-204ENST00000405807 FGL1Q08830 312 aa15.36■□□□□ 0.05
COL4A3BP-204ENST00000405807 CHIT1Q13231 466 aa15.36■□□□□ 0.05
COL4A3BP-204ENST00000405807 PDZK1Q5T2W1 519 aa15.36■□□□□ 0.05
COL4A3BP-204ENST00000405807 NLGN4YQ8NFZ3 816 aaPredicted RBP15.36■□□□□ 0.05
COL4A3BP-204ENST00000405807 OR1M1Q8NGA1 313 aa15.36■□□□□ 0.05
COL4A3BP-204ENST00000405807 SKA2Q8WVK7 121 aaPredicted RBP15.36■□□□□ 0.05
COL4A3BP-204ENST00000405807 LURAP1Q96LR2 239 aa15.36■□□□□ 0.05
COL4A3BP-204ENST00000405807 SORCS2Q96PQ0 1159 aa15.36■□□□□ 0.05
COL4A3BP-204ENST00000405807 BARHL1Q9BZE3 327 aa15.36■□□□□ 0.05
COL4A3BP-204ENST00000405807 SRRQ9GZT4 340 aa15.36■□□□□ 0.05
COL4A3BP-204ENST00000405807 CRISPLD1Q9H336 500 aa15.36■□□□□ 0.05
COL4A3BP-204ENST00000405807 EXTL2Q9UBQ6 330 aa15.36■□□□□ 0.05
COL4A3BP-204ENST00000405807 PURGQ9UJV8 347 aaKnown RBP15.36■□□□□ 0.05
COL4A3BP-204ENST00000405807 FCF1Q9Y324 198 aaKnown RBP15.36■□□□□ 0.05
COL4A3BP-204ENST00000405807 SCAMP2O15127 329 aaKnown RBP15.36■□□□□ 0.05
COL4A3BP-204ENST00000405807 TNFRSF1BP20333 461 aa15.36■□□□□ 0.05
COL4A3BP-204ENST00000405807 PSMA1P25786 263 aaKnown RBP15.36■□□□□ 0.05
COL4A3BP-204ENST00000405807 SPAM1P38567 509 aa15.36■□□□□ 0.05
COL4A3BP-204ENST00000405807 OR1E2P47887 323 aa15.36■□□□□ 0.05
COL4A3BP-204ENST00000405807 AP1S1P61966 158 aa15.36■□□□□ 0.05
COL4A3BP-204ENST00000405807 ZXDBP98169 803 aa15.36■□□□□ 0.05
COL4A3BP-204ENST00000405807 ACSM2AQ08AH3 577 aa15.36■□□□□ 0.05
COL4A3BP-204ENST00000405807 MRPL58Q14197 206 aaKnown RBP15.36■□□□□ 0.05
COL4A3BP-204ENST00000405807 WSCD2Q2TBF2 565 aa15.36■□□□□ 0.05
COL4A3BP-204ENST00000405807 ACSM2BQ68CK6 577 aa15.36■□□□□ 0.05
COL4A3BP-204ENST00000405807 RNF175Q8N4F7 328 aa15.36■□□□□ 0.05
COL4A3BP-204ENST00000405807 NLGN2Q8NFZ4 835 aa15.36■□□□□ 0.05
COL4A3BP-204ENST00000405807 OR9Q2Q8NGE9 314 aa15.36■□□□□ 0.05
COL4A3BP-204ENST00000405807 ADAMTS19Q8TE59 1207 aa15.36■□□□□ 0.05
COL4A3BP-204ENST00000405807 NR4A3Q92570 626 aa15.36■□□□□ 0.05
COL4A3BP-204ENST00000405807 FAM193BQ96PV7 902 aaPredicted RBP15.36■□□□□ 0.05
COL4A3BP-204ENST00000405807 MAP3K3Q99759 626 aa15.36■□□□□ 0.05
COL4A3BP-204ENST00000405807 DPYSL5Q9BPU6 564 aa15.36■□□□□ 0.05
COL4A3BP-204ENST00000405807 CWH43Q9H720 699 aa15.36■□□□□ 0.05
COL4A3BP-204ENST00000405807 ABCB8Q9NUT2 735 aa15.36■□□□□ 0.05
COL4A3BP-204ENST00000405807 A0A1W2PQ09 198 aa15.35■□□□□ 0.05
COL4A3BP-204ENST00000405807 SLC38A8A6NNN8 435 aa15.35■□□□□ 0.05
COL4A3BP-204ENST00000405807 GABRR3A8MPY1 467 aa15.35■□□□□ 0.05
COL4A3BP-204ENST00000405807 SLC31A2O15432 143 aa15.35■□□□□ 0.05
COL4A3BP-204ENST00000405807 PRAMEF4O60810 478 aa15.35■□□□□ 0.05
COL4A3BP-204ENST00000405807 KLKB1P03952 638 aa15.35■□□□□ 0.05
COL4A3BP-204ENST00000405807 OPN1SWP03999 348 aa15.35■□□□□ 0.05
COL4A3BP-204ENST00000405807 PIPP12273 146 aaPredicted RBP15.35■□□□□ 0.05
COL4A3BP-204ENST00000405807 FPR3P25089 353 aa15.35■□□□□ 0.05
COL4A3BP-204ENST00000405807 CORO1AP31146 461 aaKnown RBP15.35■□□□□ 0.05
COL4A3BP-204ENST00000405807 GPR19Q15760 415 aa15.35■□□□□ 0.05
COL4A3BP-204ENST00000405807 ZNF79Q15937 498 aa15.35■□□□□ 0.05
COL4A3BP-204ENST00000405807 ADGRF1Q5T601 910 aa15.35■□□□□ 0.05
COL4A3BP-204ENST00000405807 PRAMEF9Q5VWM5 478 aa15.35■□□□□ 0.05
COL4A3BP-204ENST00000405807 AKR7LQ8NHP1 331 aa15.35■□□□□ 0.05
COL4A3BP-204ENST00000405807 UPF1Q92900 1129 aaKnown RBP eCLIP15.35■□□□□ 0.05
COL4A3BP-204ENST00000405807 SLC22A18Q96BI1 424 aa15.35■□□□□ 0.05
COL4A3BP-204ENST00000405807 PLD4Q96BZ4 506 aa15.35■□□□□ 0.05
COL4A3BP-204ENST00000405807 HHATLQ9HCP6 504 aa15.35■□□□□ 0.05
COL4A3BP-204ENST00000405807 THSD1Q9NS62 852 aa15.35■□□□□ 0.05
COL4A3BP-204ENST00000405807 KCMF1Q9P0J7 381 aa15.35■□□□□ 0.05
COL4A3BP-204ENST00000405807 ZNF624Q9P2J8 865 aaPredicted RBP15.35■□□□□ 0.05
COL4A3BP-204ENST00000405807 SEC14L4Q9UDX3 406 aa15.35■□□□□ 0.05
COL4A3BP-204ENST00000405807 MGAT4AQ9UM21 535 aa15.35■□□□□ 0.05
COL4A3BP-204ENST00000405807 SCAMP1O15126 338 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms