RNA–Protein interactions for RNA: ENST00000405581.3

NRXN1-209, Transcript of neurexin 1, humanhuman

TSL 1 (best) BASIC

Gene NRXN1, Length 5,078 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NRXN1-209ENST00000405581 IFNA5P01569 189 aa16.51■□□□□ 0.23
NRXN1-209ENST00000405581 CYBAP13498 195 aa16.51■□□□□ 0.23
NRXN1-209ENST00000405581 GALK2Q01415 458 aa16.51■□□□□ 0.23
NRXN1-209ENST00000405581 SLC10A2Q12908 348 aaPredicted RBP16.51■□□□□ 0.23
NRXN1-209ENST00000405581 OR6C4Q8NGE1 309 aa16.51■□□□□ 0.23
NRXN1-209ENST00000405581 RPLP0P6Q8NHW5 317 aa16.51■□□□□ 0.23
NRXN1-209ENST00000405581 THAP3Q8WTV1 239 aaPredicted RBP16.51■□□□□ 0.23
NRXN1-209ENST00000405581 PHOX2BQ99453 314 aa16.51■□□□□ 0.23
NRXN1-209ENST00000405581 MGLLQ99685 303 aa16.51■□□□□ 0.23
NRXN1-209ENST00000405581 ZBTB20Q9HC78 741 aaPredicted RBP16.51■□□□□ 0.23
NRXN1-209ENST00000405581 PARPBPQ9NWS1 579 aa16.51■□□□□ 0.23
NRXN1-209ENST00000405581 ACSL6Q9UKU0 697 aa16.51■□□□□ 0.23
NRXN1-209ENST00000405581 H3BSH0 61 aa16.5■□□□□ 0.23
NRXN1-209ENST00000405581 RFPL2O75678 378 aa16.5■□□□□ 0.23
NRXN1-209ENST00000405581 CD63P08962 238 aa16.5■□□□□ 0.23
NRXN1-209ENST00000405581 CDKN2DP55273 166 aa16.5■□□□□ 0.23
NRXN1-209ENST00000405581 MELKQ14680 651 aa16.5■□□□□ 0.23
NRXN1-209ENST00000405581 NNATQ16517 81 aa16.5■□□□□ 0.23
NRXN1-209ENST00000405581 SLC18B1Q6NT16 456 aa16.5■□□□□ 0.23
NRXN1-209ENST00000405581 CRTC1Q6UUV9 634 aa16.5■□□□□ 0.23
NRXN1-209ENST00000405581 ASB15Q8WXK1 588 aa16.5■□□□□ 0.23
NRXN1-209ENST00000405581 FAM3CQ92520 227 aa16.5■□□□□ 0.23
NRXN1-209ENST00000405581 KCNS2Q9ULS6 477 aa16.5■□□□□ 0.23
NRXN1-209ENST00000405581 A0A1W2PPW3 197 aa16.5■□□□□ 0.23
NRXN1-209ENST00000405581 CLCA1A8K7I4 914 aa16.5■□□□□ 0.23
NRXN1-209ENST00000405581 ANHXE9PGG2 379 aa16.5■□□□□ 0.23
NRXN1-209ENST00000405581 PENKP01210 267 aaPredicted RBP16.5■□□□□ 0.23
NRXN1-209ENST00000405581 VIPR2P41587 438 aa16.5■□□□□ 0.23
NRXN1-209ENST00000405581 MLLT10P55197 1068 aa16.5■□□□□ 0.23
NRXN1-209ENST00000405581 NKX3-2P78367 333 aa16.5■□□□□ 0.23
NRXN1-209ENST00000405581 KANK2Q63ZY3 851 aa16.5■□□□□ 0.23
NRXN1-209ENST00000405581 OR5J2Q8NH18 312 aa16.5■□□□□ 0.23
NRXN1-209ENST00000405581 SERINC2Q96SA4 455 aa16.5■□□□□ 0.23
NRXN1-209ENST00000405581 MEPEQ9NQ76 525 aaPredicted RBP16.5■□□□□ 0.23
NRXN1-209ENST00000405581 CA14Q9ULX7 337 aa16.5■□□□□ 0.23
NRXN1-209ENST00000405581 MEGF11A6BM72 1044 aa16.5■□□□□ 0.23
NRXN1-209ENST00000405581 UCHL1P09936 223 aa16.5■□□□□ 0.23
NRXN1-209ENST00000405581 ABHD17BQ5VST6 288 aa16.5■□□□□ 0.23
NRXN1-209ENST00000405581 PITX2Q99697 317 aa16.5■□□□□ 0.23
NRXN1-209ENST00000405581 SYT4Q9H2B2 425 aa16.5■□□□□ 0.23
NRXN1-209ENST00000405581 KCNIP1Q9NZI2 227 aa16.5■□□□□ 0.23
NRXN1-209ENST00000405581 COPZ2Q9P299 210 aa16.5■□□□□ 0.23
NRXN1-209ENST00000405581 ZNF175Q9Y473 711 aa16.5■□□□□ 0.23
NRXN1-209ENST00000405581 OR1A2Q9Y585 309 aa16.5■□□□□ 0.23
NRXN1-209ENST00000405581 MAB21L2Q9Y586 359 aa16.5■□□□□ 0.23
NRXN1-209ENST00000405581 CD70P32970 193 aa16.5■□□□□ 0.23
NRXN1-209ENST00000405581 LRP8Q14114 963 aa16.5■□□□□ 0.23
NRXN1-209ENST00000405581 FAM69BQ5VUD6 431 aa16.5■□□□□ 0.23
NRXN1-209ENST00000405581 LIPKQ5VXJ0 399 aa16.5■□□□□ 0.23
NRXN1-209ENST00000405581 PAK1IP1Q9NWT1 392 aaPredicted RBP16.5■□□□□ 0.23
NRXN1-209ENST00000405581 PTGESO14684 152 aa16.49■□□□□ 0.23
NRXN1-209ENST00000405581 LSM1O15116 133 aaKnown RBP16.49■□□□□ 0.23
NRXN1-209ENST00000405581 TIMP1P01033 207 aa16.49■□□□□ 0.23
NRXN1-209ENST00000405581 AMY2BP19961 511 aa16.49■□□□□ 0.23
NRXN1-209ENST00000405581 HOXA11P31270 313 aaPredicted RBP16.49■□□□□ 0.23
NRXN1-209ENST00000405581 GABARAPL2P60520 117 aa16.49■□□□□ 0.23
NRXN1-209ENST00000405581 SHC2P98077 582 aa16.49■□□□□ 0.23
NRXN1-209ENST00000405581 SHFQ7M4L6 423 aa16.49■□□□□ 0.23
NRXN1-209ENST00000405581 CDRT4Q8N9R6 151 aa16.49■□□□□ 0.23
NRXN1-209ENST00000405581 OR8S1Q8NH09 359 aa16.49■□□□□ 0.23
NRXN1-209ENST00000405581 C16orf78Q8WTQ4 265 aa16.49■□□□□ 0.23
NRXN1-209ENST00000405581 PITHD1Q9GZP4 211 aaPredicted RBP16.49■□□□□ 0.23
NRXN1-209ENST00000405581 TAS2R8Q9NYW2 309 aa16.49■□□□□ 0.23
NRXN1-209ENST00000405581 ICKQ9UPZ9 632 aa16.49■□□□□ 0.23
NRXN1-209ENST00000405581 TMX2-CTNND1H3BSU7 103 aa16.49■□□□□ 0.23
NRXN1-209ENST00000405581 J3QRK9 145 aa16.49■□□□□ 0.23
NRXN1-209ENST00000405581 K7ERQ8 282 aa16.49■□□□□ 0.23
NRXN1-209ENST00000405581 TMEM25Q86YD3 366 aa16.49■□□□□ 0.23
NRXN1-209ENST00000405581 SORCS1Q8WY21 1168 aa16.49■□□□□ 0.23
NRXN1-209ENST00000405581 RTP4Q96DX8 246 aa16.49■□□□□ 0.23
NRXN1-209ENST00000405581 PEX11GQ96HA9 241 aa16.49■□□□□ 0.23
NRXN1-209ENST00000405581 TTTY10Q9BZA0 68 aa16.49■□□□□ 0.23
NRXN1-209ENST00000405581 RAB9BQ9NP90 201 aa16.49■□□□□ 0.23
NRXN1-209ENST00000405581 C2orf42Q9NWW7 574 aa16.49■□□□□ 0.23
NRXN1-209ENST00000405581 SNAP29O95721 258 aa16.49■□□□□ 0.23
NRXN1-209ENST00000405581 HSD17B1P14061 328 aa16.49■□□□□ 0.23
NRXN1-209ENST00000405581 SLC6A8P48029 635 aa16.49■□□□□ 0.23
NRXN1-209ENST00000405581 SIM1P81133 766 aaPredicted RBP16.49■□□□□ 0.23
NRXN1-209ENST00000405581 RANBP10Q6VN20 620 aa16.49■□□□□ 0.23
NRXN1-209ENST00000405581 DNAAF1Q8NEP3 725 aa16.49■□□□□ 0.23
NRXN1-209ENST00000405581 TMEM19Q96HH6 336 aa16.49■□□□□ 0.23
NRXN1-209ENST00000405581 LRR1Q96L50 414 aa16.49■□□□□ 0.23
NRXN1-209ENST00000405581 NKX2-4Q9H2Z4 354 aa16.49■□□□□ 0.23
NRXN1-209ENST00000405581 PCTPQ9UKL6 214 aa16.49■□□□□ 0.23
NRXN1-209ENST00000405581 FEZF1A0PJY2 475 aa16.49■□□□□ 0.23
NRXN1-209ENST00000405581 M0R233 179 aa16.49■□□□□ 0.23
NRXN1-209ENST00000405581 ARSDP51689 593 aa16.49■□□□□ 0.23
NRXN1-209ENST00000405581 CARD17Q5XLA6 110 aa16.49■□□□□ 0.23
NRXN1-209ENST00000405581 HMBOX1Q6NT76 420 aa16.49■□□□□ 0.23
NRXN1-209ENST00000405581 FIGNL1Q6PIW4 674 aa16.49■□□□□ 0.23
NRXN1-209ENST00000405581 SLC35F4A4IF30 521 aa16.48■□□□□ 0.23
NRXN1-209ENST00000405581 A8MVJ9 347 aa16.48■□□□□ 0.23
NRXN1-209ENST00000405581 RP2O75695 350 aa16.48■□□□□ 0.23
NRXN1-209ENST00000405581 RGS9O75916 674 aaPredicted RBP16.48■□□□□ 0.23
NRXN1-209ENST00000405581 IL1RNP18510 177 aa16.48■□□□□ 0.23
NRXN1-209ENST00000405581 ADH7P40394 386 aa16.48■□□□□ 0.23
NRXN1-209ENST00000405581 PON2Q15165 354 aa16.48■□□□□ 0.23
NRXN1-209ENST00000405581 FAM86C1Q9NVL1 165 aa16.48■□□□□ 0.23
NRXN1-209ENST00000405581 HSPB11Q9Y547 144 aa16.48■□□□□ 0.23
NRXN1-209ENST00000405581 COL2A1P02458 1487 aaPredicted RBP16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms